Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g01074 ATGGAAGGCCCTCTGTTGCGAGAAGTGTGCGCCCTGTACGACCAAATCTCGAGCCTTGCCAGCCTCAAGCCTTCCAAAAATGTCGACACTCTCTTCACCCAACTAGTCCTCACGTGCTCCCCGCCCGCCCCTGGCCTTGATATCGCCTCTTTGCCTCAGCCACTTCAAGCCATGAGGGCTCATCTCATCCGTCTCTGCGCCACCGCTGAGGCGCTTCTTGAAGTTCATTTCTCTTCCATTTTGGCTTCCTTTGAGAATCCCATTCATAACTTGTCTATCTTTCCTTATTACTCTAATTACTTGAAGCTCTCTCTTCTCGAGTTCGATATTCTTATATCTCATTGTCGTCGGGTACCTTCTAGCATTGCATTCGTTGGCTCCGGCCCACTCCCGCTTTCCTCCATTGTCATGGCGTCCACTCATCTTAAGGGTACTATTTTCCACAACTTTGACATCGACCCAGCTGCAAACTCCATGGCGAGGCGGTTGATTCGCTCGGACTCAGATTTATCGAAGCGGATGGTGTTTCACACGGCAGATGTAATGGAGGTGACGAAGGCGTTTGGAGAGTACGAGGTGGTGTTTTTAGCAGCATTGGTAGGGTTGGAGGAGGAAGAGAAAGGAAGGGTTTTGAGGCATTTAGGGAAGCACATGGCACCTGGGGCTTATTTGATGCTAAGGAGTGCACATGGAGCTAGAGCATTTCTCTACCCTGTTGTTGACGTTTCTGACATTGAAGCATCTGGGTTCGAGATTTTGTCCGTGTTTCACCCTACTGATGAAGTTATAAACTCCGTTGTTATTGCAAGAAAGGTGTCTGATCTCGTTCTCGATAACAATAATTATAATGACAACAACACAGATGATGAAAAACGAGGTGTTTTAGTTAACACCCCTATAATATTGGCCGAGAAGTGCTCGGGGTTTAAAGACTTCGGTCCCATGATCGATGAGCTTGGCATAGAAGAGCAACTTTCTTGA 981 47.71 MEGPLLREVCALYDQISSLASLKPSKNVDTLFTQLVLTCSPPAPGLDIASLPQPLQAMRAHLIRLCATAEALLEVHFSSILASFENPIHNLSIFPYYSNYLKLSLLEFDILISHCRRVPSSIAFVGSGPLPLSSIVMASTHLKGTIFHNFDIDPAANSMARRLIRSDSDLSKRMVFHTADVMEVTKAFGEYEVVFLAALVGLEEEEKGRVLRHLGKHMAPGAYLMLRSAHGARAFLYPVVDVSDIEASGFEILSVFHPTDEVINSVVIARKVSDLVLDNNNYNDNNTDDEKRGVLVNTPIILAEKCSGFKDFGPMIDELGIEEQLS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8505799 8507598 - CmaCh05G010740.1 Cma05g01074 295192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g01074 326 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Cma05g01074 326 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Cma05g01074 326 PANTHER NICOTIANAMINE SYNTHASE 3 4 276 IPR004298 GO:0030410|GO:0030418
Cma05g01074 326 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 258 IPR029063 -
Cma05g01074 326 Gene3D Vaccinia Virus protein VP39 12 273 IPR029063 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma05g01074 Cma11g01235 CCT
Cma05g01074 Cma12g01028 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00403 Cma-Chr10:1871401 Cma05g01074 Cma-Chr5:8505799 7.66E-92 transposed
Cma11g01235 Cma-Chr11:8123732 Cma05g01074 Cma-Chr5:8505799 3.51E-125 transposed
Cma12g01028 Cma-Chr12:8172889 Cma05g01074 Cma-Chr5:8505799 3.61E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g01074 K05953 - csv:101203651 464.151