Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g01091 ATGGGGCATTTCTCCACCATGTTCAATGGGCTGGCAAGGTCGTTTTCCTTCAAGAAAGGTAGAAACTCGGCGAGTCTAGTTGACGAGGGAGGGCGAGAAGCTGCAAAAGCCATGATCAAGGATGCGAAAAGGAAAGACTCGATATTGTGCACCACTGGTGTCGTCAATGCCGAAGGTTCGAATACTTTTGCTTCGGTGTTCTCGAAAAAAGGCGAAAAAGGAGTTAACCAAGATTGCTGCATTGTGTGGGAGGAATTTGGATGCCAAGAAGACTTGATATTTTGTGGGGTTTTCGATGGGCACGGACCGTGGGGTCATTTTGTTGCGAAGGCGGTAAGAGAATCAATGCCACCATCTTTGCTGTGCCATTGGCAGCAAGGACTTGCTCAAGCTTTCCTCGACCCGGAATTGGATTCAGAAAAGAAGCATCAGCGGTTCGACATATGGAAGCATTCCTATTTAAGAACTTGTGCTGCCATCGATCACGAACTCGAGCAGCACCGTAAAATCGATACGTTTTATAGTGGAACAACTGCACTGTCCATTGTTAAACAGGGCGAGCTAGTCGTTTTAGCCAATGTTGGCGACTCCCGAGCAGTCTTGGGTACTACTTCTGATGATGGAAGTGTAGTACCGGATCAGCTCACCGTCGACTTCAAACCGAACCTACCTCAGGAGGCCGAGCGGATAATTCAATGCAATGGGAGGGTGTTTTGTTTAAATGACGAGCCGGGTGTTCATAGGGTCTGGCTTCCGAACGAGGAAACGCCCGGGTTGGCGATGTCGAGAGCCTTCGGTGATTATTGTATTAAAGAATTTGGACTCATTTCTGTGCCAGAAGTTACCTATAGAAGTATAACCAGCAGAGACCAATTCATTATATTGGCAACTGATGGGGTATGGGATGTTGTCACCAACCAAGAAGCAGTGGAGATTGTATCATCGACACCGGATAGAACGAAATCGTCAAAACGTCTGGTCGAGTGTGCTGTTCGGGCATGGAAACGGAAGAGACGAGGCATCGCAATGGATGATATGTCAGCTATCTGCCTCTTCTTCCACTCATCAGAGCAAGAACATCACCTTGTAGTATCCACACCATAG 1104 47.64 MGHFSTMFNGLARSFSFKKGRNSASLVDEGGREAAKAMIKDAKRKDSILCTTGVVNAEGSNTFASVFSKKGEKGVNQDCCIVWEEFGCQEDLIFCGVFDGHGPWGHFVAKAVRESMPPSLLCHWQQGLAQAFLDPELDSEKKHQRFDIWKHSYLRTCAAIDHELEQHRKIDTFYSGTTALSIVKQGELVVLANVGDSRAVLGTTSDDGSVVPDQLTVDFKPNLPQEAERIIQCNGRVFCLNDEPGVHRVWLPNEETPGLAMSRAFGDYCIKEFGLISVPEVTYRSITSRDQFIILATDGVWDVVTNQEAVEIVSSTPDRTKSSKRLVECAVRAWKRKRRGIAMDDMSAICLFFHSSEQEHHLVVSTP 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8604749 8607487 - CmaCh05G010910.1 Cma05g01091 295209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g01091 367 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 360 - -
Cma05g01091 367 ProSiteProfiles PPM-type phosphatase domain profile. 63 353 IPR001932 -
Cma05g01091 367 SMART PP2C_4 53 351 IPR001932 -
Cma05g01091 367 Pfam Protein phosphatase 2C 87 327 IPR001932 -
Cma05g01091 367 CDD PP2Cc 63 353 IPR001932 -
Cma05g01091 367 Gene3D - 48 356 IPR036457 -
Cma05g01091 367 PANTHER ALPHABET, ISOFORM E-RELATED 1 360 - -
Cma05g01091 367 SUPERFAMILY PP2C-like 53 354 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g01091 Cma-Chr5:8604749 Cma01g00483 Cma-Chr1:2450184 6.86E-119 dispersed
Cma10g01149 Cma-Chr10:8131534 Cma05g01091 Cma-Chr5:8604749 7.33E-167 wgd
Cma12g01048 Cma-Chr12:8302692 Cma05g01091 Cma-Chr5:8604749 0 wgd
Cma17g00347 Cma-Chr17:1887173 Cma05g01091 Cma-Chr5:8604749 3.81E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g01091 - - cmax:111493912 746.888