Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma05g01311 | ATGGTGGCCTGGATTTTGTGTTCCTTCATGTTTCTACTGGTTTTAAGGGCGGCGGTGGTTCTGTGGTGGCGGCCGAGGAAAATAGAACACCATTTCTGCCGCCAAGGAATCAGAGGCCCTCCCTACCGTTTCTTCATCGGAAATGTTAAGGAAATTGTCGGAATGATGATTAAAGCTTCCTCGGTTCACTCTTGTCCTAATTCTTCTCATAATATTCTTCCTCGTGTTCTTCCTTTTTACCATCACTGGAAGAAGATTTACGGGTCTAAATTTCTAGTGTGGTTCGGGCCAACGGTGAGATTGGCAGTGTCTGATCCAGACCTGATTCGAGAAATCTTCACATCAAAATCAGAATTCTGCGAGAAAAACGAACCTCACCCACTCGTTAAACAGCTTGAAGGCGATGGCCTCCTCAGCCTCAAAGGCCAAAAATGGGCTCTTCATCGCAAGATCATCTCTCCCTCTTTCCACATGGACAACCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTTGTGGAAATGATGGAGAAATGGTCGGCAATGTCAGCAGATTCCGGCGAGGTGGAAATTGAAGTGTCGGAATGGTTCCAAACCCTAACGGAAGATATCATCACTAGAACCGCCTTTGGCTCAAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCTCAACAAATGGTCCTTGCTTCTCAAGCCTTTGACAAAGTTTACATCCCTGGTTACAGATTCTTACCCACGAGAACGAACGTGAATTCGTGGCGATTGGATAGAGAAATAAGAAAATCGTTGATGAAATTGATCGACCGACGGCACGAGAATTCGATCGAGTCGAGCTCGAAGGATTTATTAGGGTTGATGATTCGAGCATCCAAGTCTTCTCCTTCATCTACAATCACTGTTAATGACATTGTTGAAGAGTGCAAGGGGTTTTTCTTTGCTGGCAAACAGACCACATCTAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGATACAGGCACGTGATGAGGTACTAAGGGTGTGTGGAGCACGTGACGTACCTTCCAAAGATGATGTTACAAAGCTCAAAACGTTGAGTATGATTATCAACGAATCCTTACGGTTATATCCACCGACAGTGGCAACTATTCGACAAGCGAAAGCTGATGTAGAGTTTGGTGGTTACATGATTCCACGTGGCACTGAACTATTGATTCCAATTTTGGCTGTTCATCATGATCAAACGATATGGGGCAATGATGTGAACGAGTTCAATCCAGGGCGATTTGCAGAAGGTGTGGCAAAGGCAGCCAATCATCGAGTTGGATTCATTCCATTTGGGCTTGGAGCTCGGACATGTATAGGCCAAAACTTGGCTATATTGCAAGCAAAGTTAGCTCTCGCACTCATTCTTCAAAAGTTCTCTTTTCGATTGGGTCCCTCTTATCAACACTCACCAGCAGTTCAGATGTTACTTTATCCACGATATGGTGCACCTATTATCTTCCAGAAGTTATCCACTTCAATGGTCCATCAAGATCAACGGTCATGA | 1554 | 44.53 | MVAWILCSFMFLLVLRAAVVLWWRPRKIEHHFCRQGIRGPPYRFFIGNVKEIVGMMIKASSVHSCPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVEMMEKWSAMSADSGEVEIEVSEWFQTLTEDIITRTAFGSSYEDGKAIFRLQAQQMVLASQAFDKVYIPGYRFLPTRTNVNSWRLDREIRKSLMKLIDRRHENSIESSSKDLLGLMIRASKSSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQIQARDEVLRVCGARDVPSKDDVTKLKTLSMIINESLRLYPPTVATIRQAKADVEFGGYMIPRGTELLIPILAVHHDQTIWGNDVNEFNPGRFAEGVAKAANHRVGFIPFGLGARTCIGQNLAILQAKLALALILQKFSFRLGPSYQHSPAVQMLLYPRYGAPIIFQKLSTSMVHQDQRS | 517 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9941119 | 9944307 | - | CmaCh05G013110.1 | Cma05g01311 | 295429 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma05g01311 | 517 | PRINTS | E-class P450 group I signature | 84 | 103 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PRINTS | E-class P450 group I signature | 200 | 218 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PRINTS | E-class P450 group I signature | 304 | 321 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PRINTS | E-class P450 group I signature | 324 | 350 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PRINTS | E-class P450 group I signature | 444 | 454 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PRINTS | E-class P450 group I signature | 454 | 477 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PRINTS | P450 superfamily signature | 315 | 332 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PRINTS | P450 superfamily signature | 445 | 454 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PRINTS | P450 superfamily signature | 454 | 465 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | Gene3D | Cytochrome P450 | 22 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | Pfam | Cytochrome P450 | 79 | 484 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 447 | 456 | IPR017972 | GO:0005506|GO:0016705 | |
Cma05g01311 | 517 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 4 | 501 | - | - | |
Cma05g01311 | 517 | SUPERFAMILY | Cytochrome P450 | 71 | 504 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma05g01311 | 517 | PANTHER | CYTOCHROMEA2 | 4 | 501 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma05g01311 | Cma10g00573 | CCT | |
Cma05g01311 | Cma12g01226 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma05g01311 | Cma-Chr5:9941119 | Cma10g00756 | Cma-Chr10:3444531 | 2.52E-148 | dispersed | |
Cma17g00076 | Cma-Chr17:377036 | Cma05g01311 | Cma-Chr5:9941119 | 6.71E-112 | dispersed | |
Cma17g00077 | Cma-Chr17:381497 | Cma05g01311 | Cma-Chr5:9941119 | 1.22E-108 | dispersed | |
Cma18g01092 | Cma-Chr18:8973840 | Cma05g01311 | Cma-Chr5:9941119 | 9.83E-45 | dispersed | |
Cma10g00573 | Cma-Chr10:2620518 | Cma05g01311 | Cma-Chr5:9941119 | 0 | wgd | |
Cma11g00556 | Cma-Chr11:2693602 | Cma05g01311 | Cma-Chr5:9941119 | 0 | wgd | |
Cma12g01226 | Cma-Chr12:9549605 | Cma05g01311 | Cma-Chr5:9941119 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma05g01311 | K15639 | - | csv:101208789 | 948.732 |