Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00016 ATGGACATCTCTGCAACAGCCTTCCTTTTTCTTACCTTTCTATCCCTTTGCCTTTACCTTCTTCTCTTCACTTCACCAAAGAAACCCAAATCCAACCAAGGTTTCAAACACTTCCCCATAGTGGGAACCTTGCCGCTCTTCTTGTTAAACCGACACCGTTTTCTTGACTGGTCGACGGAGGTTCTCAGCAACTGCCAGACCAACACGGCGGTCTTCCGTCGTCCGGGGAAGGTTCACGGCGTCATCACCGCAAACCCACTTGTGGTGGAGCACATACTGAAGACCCAGTTCGAGAATTACCCAAAAGGAAAACGCTTCATCTCGCTTTTGGAGGATTTTCTGGGACGCGGAATTTTCAACTCCGACGGAGAAATTTGGAAAGTTCAGAGGAAGACGGCGAGTTATGAGTTCAACACCAAATCGCTGAGGAATTTCGTTATGGAAAATGTCACAGTTGAGATTCAGACGAGGCTGTTGCCTATTTTGGGAAAGGCTTCTGAAACGGAACGGATTTTGGATCTGCAGGACGTTTTGGAGCGATTTGCGTTCGATAATGTTTGTAAATTGGCTTTTAATTTCGACCCCTGTTGTCTCGGCGGCGATGGCACTTCCGGCGCCGATTTCATGCGCGCTTTTGAGGACGCCGCCACTCTCAGCTCTGGCAGATTTATGTATGCTTTGCCGGGGTTGTACAAAGTGAAGAAATTTTTGAACATGGGATCAGAGAGAACCCTGAAGAAATCCATAGCCAGAGTTCACAAATTTGCAGAGGACATCATACGCTCAAGAATGGAAGAGAAGAAGACAACCCATGTCAAAAACAACCAAGATTTACTCTCCCGATTTATGGGAACCCAAGAAAATAACTCCCCTGAATTCCTCCGAGACATAATCATAAGCTTCATCCTCGCCGGCCGGGACACCACCTCCTCTGCTCTAACATGGTTCTTCTGGATCCTATCCTCCCGACCAAACATCACACAAAAAATCCTCAAAGAGCTGGAAACAATCCGCTCAAGAACCGGAAAGAAACTCGGAGCAGAGTACAGCTTCGAGGAGCTCCGAGATATGCACTATCTACAAGCAGCACTATCGGAGACTCTGCGGCTGTACCCGCCGGTGCCGGTGGATACCAAAGCGTGCCGGAACGAGGACGTATTACCGGACGGGACGTTGGTTGGGAGGGACTGGTTCGTGACGTACCACACATATGCAATGGGGAGAATGGAGAGGATTTGGGGGGAGAATTGCGGGGAGTTCTTGCCGGAGAGGTGGGTGGAGAATGGGGTGTGTAGGGCGGAGAGCCCGTTTCGGTTCCCGGTGTTTCACGCGGGTCCGAGGATGTGCTTGGGGAAGGACATGGCTTATATTCAGATGAAGTCCATAGCTGCGGCGGTGATAGAGAGGTTTGAGGTGGGGATGGCGGAGAAGGAGAAGAGTCCAAAGTATTTGTTGTCGCTGACGCTGAGGATGGAGAATGGGTGTCCTGTGGTACCGTTCTCGCATCCCTTCCATTTACCACCACAATACCCGCCGCCGCCCTCACCTGGTTCTGCTCTGCCTCCGTGGCTTATAGCAACAGCAATTTCCCTAAACCAATCTTCAATGGCGTACGAAGGAGGAAACCTCAAGTCCACCTCCATTAATGGGGTTAAACTCTACACTGTAGCATCCCAACAACGCTCTCTTGCTACTTGGATCAATCCCAAGAAGCTGCGAGCTCTGCGCAAAGACAAGGATTACACGTCAAGGGTGGACTTGATCCAGGATTTGAGGTTTGACATTGCATCAAGCAAAATAAAAGCAACCCCCGACGGAGAGTTTCTTATAGCATCAGGTATCTATCCACCGCAAGTTAAAGTATATGAACTGAGGGAACTTTCATTGAAGTTCAAAAGACATTTTGATTCAGAGATAATCGACTTCCAGATACTGGATGATGACTACTCAAAGTTGGCATTTATGTGTGCTGATCGTTCTATTGTTCTCCATGCTAAATATGGAAAACATCACACCTTGCGGATACCAAGGATGGGAAGGAATATTGAATATGACAACTGGTCTGCTGACTTGCTTTGTGCTGCATCCTCTCCAGATGTGTACAGAATCAGTTTGCAGCGGGGGCAGTTTCTTCCACCTCTCAACACAGAATCCCCAGCAATAAATGTTGTTTCTCGTAGCAAGCTTCATGGGATAGTTGCTTGTGGGGGTGTAGATGGAGCTGTAGAATGTTTTGACACCAGAACGAAGTTATCTTCAATTGGAAGAATTGATGCTATTGCACCTGCAGGAGATAAGGACCAGGAGGTTACTGCATTAGCATTTGATGATATTGGTGGATTCCAAATGGCCGTCGGCAGTAGCTCAGGAAAGATTTTGATATACGATTTGCGTTCATCAGATCCTATAAGAATCAAAGATCACATGTACGACAGTCCAATTCTGAACATTAAGTGGCATAGCACTCTTAATTCTGAAAAACCAAAAATGATTACCACTGACAAGCACATTGTTAGGATTTGGGACCCAGATACTGGAGAAGGAATGACCAGCATTGAGCCCACGCTTGGTCCAATAAATGATACATGTGTATTCAAGGACAGTGGATTGATGCTACTAGCTTTGAATTCAAGCCAAATACCTTCTTACTTTCTGCCTGCGCTGGGACCTGCACCAAAGTGGTGCTCTTATTTGGAGAATTTGACGGAGGAGTTGGAGGAGGGTGCAGAAACAACTATATATGATGATTTCAAGTTCTTGACAAAAGAAGAACTTGAGAGGCTAAATTTGACAAACCTGATTGGGACTAATCTGCTAAGAGCTTACCTTCATGGTTTCTTTATTGATTATCGCTTGTATAAAAAGGCAAAATCACTGGCGGATCCTTTTGCATATGATGCTTACATAGAACAAAGGAAAAAAGAGAAACTAGATGAGGAGCGTGCCAACCGAATTACGGTGAAAAGAAAATTACCCAAAGTCAACAGGCGCCTCGCAAATCAAATCCTTGAAGAGGAAGAAGCTGAAACGGAAAAGAAGGATGAAGAGGATGTCAATAAGGCCAAGAAGGCATCAAAGAAGAAGAAAGGGCTCAGTAGTGAAATCTTTCAAGATGAACGTTTTGCGAATATGTTTAAGAATGAGAACTTCGAGATCAATGAGCTTTCACCAGAGTATCTGGCCCTGCATCCAGTGGCATCTACGAAGCAGCCATCTTTGGTGGAAGAGCATTTTGAACCTGTCTTGGAGGACAGTGAACAAAGCTTAAGTAATTCTGATGCCTCAGTTGAATCAGAATTTGAAGATGAACCCAGCAGAGATAAGCATAAGAAGGCGCGAGCTCCAAAATTGTATGAGGTGAAGGATGAAAAGCATGCTGAGGCGTTCTGGAACAGTGTATCACTTGCTAAGGAGGAAAGGCTCACTATGGAGGAGAGAATTGCTGCTATGGGAGACAATAAGCTAGATTCTGGAATTCTAAATGAAGTTAAATTGGGACCAGGAGGGTCGCGAGAGATTTCATTTAAGCCAAGAAGCTCTGCCAAGTATATGGAAGATGATGACGATGAAAGTCCACGAAAGAAGAATCGGAGCGCCGAATTTTCAGGTCCCAAGGCCAATAAATCAGGTTCCAGAAGTGGAATGAGACATGGGAGCAGCAGAGGTGGAAACAACAGAGTGGCACATCAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACGTTGGCCAGTGGCACGCCTGCTACGTCGGGGTCATCAGGTAATGTGGCTAACTATATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGAACTCTTGATGGCTTCCTACGCCAGGCCGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCATATTGACAACCCGTCAATCGGCTCGTGCGCTTCTTGCAATAAACGACTACTTCTCCCGCCTTCGAGCTCTAAGCTCTCTCTGGCTTGCACGGCCACGAGAGTGA 3987 46.48 MDISATAFLFLTFLSLCLYLLLFTSPKKPKSNQGFKHFPIVGTLPLFLLNRHRFLDWSTEVLSNCQTNTAVFRRPGKVHGVITANPLVVEHILKTQFENYPKGKRFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVTVEIQTRLLPILGKASETERILDLQDVLERFAFDNVCKLAFNFDPCCLGGDGTSGADFMRAFEDAATLSSGRFMYALPGLYKVKKFLNMGSERTLKKSIARVHKFAEDIIRSRMEEKKTTHVKNNQDLLSRFMGTQENNSPEFLRDIIISFILAGRDTTSSALTWFFWILSSRPNITQKILKELETIRSRTGKKLGAEYSFEELRDMHYLQAALSETLRLYPPVPVDTKACRNEDVLPDGTLVGRDWFVTYHTYAMGRMERIWGENCGEFLPERWVENGVCRAESPFRFPVFHAGPRMCLGKDMAYIQMKSIAAAVIERFEVGMAEKEKSPKYLLSLTLRMENGCPVVPFSHPFHLPPQYPPPPSPGSALPPWLIATAISLNQSSMAYEGGNLKSTSINGVKLYTVASQQRSLATWINPKKLRALRKDKDYTSRVDLIQDLRFDIASSKIKATPDGEFLIASGIYPPQVKVYELRELSLKFKRHFDSEIIDFQILDDDYSKLAFMCADRSIVLHAKYGKHHTLRIPRMGRNIEYDNWSADLLCAASSPDVYRISLQRGQFLPPLNTESPAINVVSRSKLHGIVACGGVDGAVECFDTRTKLSSIGRIDAIAPAGDKDQEVTALAFDDIGGFQMAVGSSSGKILIYDLRSSDPIRIKDHMYDSPILNIKWHSTLNSEKPKMITTDKHIVRIWDPDTGEGMTSIEPTLGPINDTCVFKDSGLMLLALNSSQIPSYFLPALGPAPKWCSYLENLTEELEEGAETTIYDDFKFLTKEELERLNLTNLIGTNLLRAYLHGFFIDYRLYKKAKSLADPFAYDAYIEQRKKEKLDEERANRITVKRKLPKVNRRLANQILEEEEAETEKKDEEDVNKAKKASKKKKGLSSEIFQDERFANMFKNENFEINELSPEYLALHPVASTKQPSLVEEHFEPVLEDSEQSLSNSDASVESEFEDEPSRDKHKKARAPKLYEVKDEKHAEAFWNSVSLAKEERLTMEERIAAMGDNKLDSGILNEVKLGPGGSREISFKPRSSAKYMEDDDDESPRKKNRSAEFSGPKANKSGSRSGMRHGSSRGGNNRVAHQGMDALQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE 1328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 102301 115649 - CmaCh06G000160.1 Cma06g00016 295570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00016 1328 MobiDBLite consensus disorder prediction 1081 1114 - -
Cma06g00016 1328 Pfam NUC153 domain 1038 1065 IPR012580 GO:0005634
Cma06g00016 1328 Gene3D Cytochrome P450 24 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 Gene3D - 551 879 IPR015943 GO:0005515
Cma06g00016 1328 ProSiteProfiles DOG1 domain profile. 1075 1325 IPR025422 GO:0006351|GO:0043565
Cma06g00016 1328 MobiDBLite consensus disorder prediction 1159 1227 - -
Cma06g00016 1328 MobiDBLite consensus disorder prediction 1099 1114 - -
Cma06g00016 1328 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 PANTHER UNCHARACTERIZED 541 1209 IPR040382 -
Cma06g00016 1328 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Cma06g00016 1328 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 MobiDBLite consensus disorder prediction 1202 1227 - -
Cma06g00016 1328 Coils Coil 996 1018 - -
Cma06g00016 1328 MobiDBLite consensus disorder prediction 1178 1201 - -
Cma06g00016 1328 Pfam Cytochrome P450 74 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 SUPERFAMILY Cytochrome P450 27 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma06g00016 1328 SUPERFAMILY WD40 repeat-like 587 874 IPR036322 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00016 Cma-Chr6:102301 Cma11g00038 Cma-Chr11:173319 5.26E-130 dispersed
Cma06g00016 Cma-Chr6:102301 Cma06g00023 Cma-Chr6:143293 1.05E-60 proximal
Cma14g00499 Cma-Chr14:2440225 Cma06g00016 Cma-Chr6:102301 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00016 K14788 - csv:101222544 1221.07