Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma06g00023 | ATGTGGAAGACACCAGCAGAGCGGTGTTTCCTGTGGATTGGTGGCTTCCGTTCATCTGAGATCCTAAAGCTTCTTGTAAGCCAATTGGAGCCTTTGACCGAGCAGCAAGTAGCGGAAATCTGCAACCTGCAACAATTATCACAACAGGCAGAAGATGCTCTCTCACAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACGTTGGCCAGTGGCACGCCTGCTACGTCGGGGTCATCAGGTAATGTGGCTAATTATATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGAACTCTTGATGGCTTCCTACGCCAGGCCGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCATATTGACAACCCGTCAATCGGCTCGTGCGCTTCTTGCAATAAACGACTACTTCTCCCGCCTTCGAGCTCTAAGCTCTCTCTGGCTTGCACGGCCACGAGAGTGA | 465 | 50.11 | MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDALQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE | 154 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 143293 | 143979 | - | CmaCh06G000230.1 | Cma06g00023 | 295577 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma06g00023 | 154 | ProSiteProfiles | DOG1 domain profile. | 1 | 151 | IPR025422 | GO:0006351|GO:0043565 | |
Cma06g00023 | 154 | Pfam | Seed dormancy control | 1 | 27 | IPR025422 | GO:0006351|GO:0043565 | |
Cma06g00023 | 154 | PANTHER | TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 | 1 | 154 | - | - | |
Cma06g00023 | 154 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 154 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma06g00023 | Cma-Chr6:143293 | Cma14g00509 | Cma-Chr14:2477165 | 2.16E-99 | dispersed | |
Cma06g00016 | Cma-Chr6:102301 | Cma06g00023 | Cma-Chr6:143293 | 1.05E-60 | proximal | |
Cma06g00019 | Cma-Chr6:126605 | Cma06g00023 | Cma-Chr6:143293 | 9.08E-110 | proximal | |
Cma06g00023 | Cma-Chr6:143293 | Cma06g00025 | Cma-Chr6:157073 | 6.85E-109 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma06g00023 | K14431 | - | csv:101219149 | 275.789 |