Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00168 ATGAGAAGGCAGCGGCGAACCTGGGTGGTGCACGGCGGCCGGCCGGACGGCGGAGACGGACAGAGAAATTATAAGGGAAGGAAAAAGCCTCCTGAAACTCGGATCTCCGATCTGAGATTTAACTGTGAGAAAGAATTGGAGACTGAAGTTGCTTCTGCTGTTTTGATGGCTGTTTCTTGTCTCTGTTTTTGTCTTCTGTTTGGGGGCGCCGCCGTCGTTGCCGCCGCAGGCGGTGGAAGCGGCGGCGGTTCCAGGCAGCTCGATAACACACCCACATGGGCTGTTGCTGGTGTTTGCTTCTTTTTCATTGTTATTTCCATTGTATTGGAGAAAGTTCTTCACAAAGTTGGAACGTGGTTGACAGAAAAGCACAAGAGTTCTCTGTTGGAAGCTCTGGAGAAGGTTAAGGCTGAGCTGATGATTTTGGGATTCATTTCCCTGCTTCTGACTTTTGCACAAGGATTTATAGTCCAAATCTGCATTCCTCCAGCCATTGCCAATACCATGTTGCCTTGCCCACTTGAAAAGAAAGATGCCTCATCGTCTGAAAACAGCGACGACGAACATCACCGGCGGCTTCAATGGCTAATCCGAAGATCGTTGGCTGGAGGCCACAATGTCGCCCCGTGTAAGGATGGTAAGGTGTCTCTTATATCTATTGATGGATTGCATCAGTTGCATATTCTCATATTCTTCCTAGCTGTGTTTCATGTGGTCTTTAGTGTTACCACAATGACACTTGGAAGGGTAAAGATTCGAGGCTGGAAGGAGTGGGAGAAGGAAACTTCGACTCATAACTACGAGTTCTTCAATGATCCTGCAAGATTTAGGCTCACTCATGAGACATCTTTTGTGAAAGCACACACCAGCTTTTGGACACGCCTTCCTTTCTTCTTCTATATTGGCTGCTTCTTCAGGCAATTTTATGGCTCGGTTAGTAAGGCAGATTACTTAACGCTCCGCAATGGATTCATAACAGTTCATTTAGCACCCGGAAGTAAATTTGACTTCCAAAGATATATCAAAAGGTCATTAGAAGACGACTTCAAGGTAGTCGTCGGTGTGAGTCCTGTTCTGTGGTTGTCATTTGTGATCTTCCTGCTTCTTAATGTAGCTGGATGGCGGACGATGTTTTGGGCGTCGTTTATCCCTTTGATCATAACCTTAGCTGTTGGATCAAAACTTCAAGCCATTTTGACTAGGATGGCTCTTGAAATCTTGGAGAAACATGCCGTGGTCCAGGGAATTCCGCTCGTGCAAGGGTCCGACAAGTACTTTTGGTTCGGTCGACCTCAACTGATTCTTCATCTCATGCATTTTGCTTTGTTTCAGAATGCATTCCAGATCACCTTTAACTTGTCTATACTGCATTCTTTCGGGTCGAATTCTTGCTTCTCTGACGGTCCCGTCCTTGCCATTGTAAAAGTTTGTATAGGGGTCATAACATTGTTTCTCTGCAGCTACGTTACGCTTCCGATATACGCCCTTGTAAATCAGATGGGGTCGGGCATGAAAAGGTCCATTTTCGACGAACATACATCAAAGGCGCTCAAGAAATGGCATGAAAAAGCCAAGAAGAAGCGGGTTCTACGAAGCTCAACAACTAGAACACTTGGAGGTAGTTCTAATGCTTCGCCTCTGAGCTCATTTGGACGCTCATTGCGACGGTTTAAAACCACGGGACACTCCATACGTGTGCCTGCGTACGATGATCTTGAATTGTCTGATTACGAGGGCGATTCACCAGCAACGGCTATGCAAGTATCGAGTATCGAATCGAGTAATGTCAATGTGGATGGAGATGAAATACATGAAATTGGTGAAAGGGAACAACCGGAGAGTATAGAGCAAACTAAAGAAGGAGATGAGTTCTCGTTTATAAAGCCTGCACCAGTGAAATGA 1902 45.9 MRRQRRTWVVHGGRPDGGDGQRNYKGRKKPPETRISDLRFNCEKELETEVASAVLMAVSCLCFCLLFGGAAVVAAAGGGSGGGSRQLDNTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLTEKHKSSLLEALEKVKAELMILGFISLLLTFAQGFIVQICIPPAIANTMLPCPLEKKDASSSENSDDEHHRRLQWLIRRSLAGGHNVAPCKDGKVSLISIDGLHQLHILIFFLAVFHVVFSVTTMTLGRVKIRGWKEWEKETSTHNYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFDFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFLLLNVAGWRTMFWASFIPLIITLAVGSKLQAILTRMALEILEKHAVVQGIPLVQGSDKYFWFGRPQLILHLMHFALFQNAFQITFNLSILHSFGSNSCFSDGPVLAIVKVCIGVITLFLCSYVTLPIYALVNQMGSGMKRSIFDEHTSKALKKWHEKAKKKRVLRSSTTRTLGGSSNASPLSSFGRSLRRFKTTGHSIRVPAYDDLELSDYEGDSPATAMQVSSIESSNVNVDGDEIHEIGEREQPESIEQTKEGDEFSFIKPAPVK 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 831182 838728 + CmaCh06G001680.1 Cma06g00168 295722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00168 633 MobiDBLite consensus disorder prediction 1 30 - -
Cma06g00168 633 PANTHER MLO-LIKE PROTEIN 90 586 - -
Cma06g00168 633 MobiDBLite consensus disorder prediction 605 633 - -
Cma06g00168 633 MobiDBLite consensus disorder prediction 528 548 - -
Cma06g00168 633 Pfam Mlo family 85 538 IPR004326 GO:0006952|GO:0016021
Cma06g00168 633 MobiDBLite consensus disorder prediction 605 623 - -
Cma06g00168 633 PANTHER MLO-LIKE PROTEIN 1 90 586 IPR004326 GO:0006952|GO:0016021
Cma06g00168 633 MobiDBLite consensus disorder prediction 533 548 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00168 Cma-Chr6:831182 Cma07g00379 Cma-Chr7:1625474 0 dispersed
Cma06g00168 Cma-Chr6:831182 Cma03g00619 Cma-Chr3:5399530 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00168 K08472 - csv:116402632 924.465