Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma06g00173 | ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATGAGTTCTTCCTTTAACTCCAGCAGTGGCAACGATGATGCTCTTCTACAAAGCTTTGCTGCTGCTTCAAATGGGGATGATTATGATAGTGATGGCTCCAACTTTGCACCCCCTACTCCTACAACCATATCGATGGCGATTCCAGCCGAACTTGCTGGGGTCATACCTTTGATTGATAAATTCCAGGTCGAAGGATTCTTAAGGATGATGCATAAACAGATACATTCTTCTGGAAAACGTGGATTCTTTTCCAAACGATCTGTCGGTCCTCAAGTTCGGGAAAAATTCACATTTGAAGATATGTTGCAATATTTGATCAAAGCATGGGAGCTGATGTATCTTTGTGCATCTGCGATGCCTCCTAGCAAGGATATTGGTGGATATCTTTCAGAGTATGTTCATAATGTTGCACAAGGCAGTAGTACTGATTCGGAGGTTCGAGTTTTTGCATTAAATACACTGAATGCTTTAAAGCGTTGCATGAAGGCGGGTCCCAGGCATATAATACCTGGTCGTGAGGAAATTGAAGCTCTTTTAACAGGGCGAAAGCTTACAACCATAGTGTTTTTCTTGGATGAAACTTTTGAAGAAATCACATACGATATGACAACAACAGTGGCTGATTCGGTTGAGGAACTTTCAGGAATTATAAAACTGTCAGCACACTCTAGCTTCAGTCTTTTTGAATGCCGTAAGATTGTCAGTGGGGCTAAAGCACTTGATCTAGGAAATGAATTCAAGGCAGCAAAAGATCGAAGTAAAGGAGAAATTCTGCACTTCAAGCTGACGTTTAAAAAGAAGCTGTTTCGGGAGTCTGACGAAGCAGTTGCAGACCCAATGTTTATACAGCTATCATATCTTCAGCATGACTATTTGTTGGGGAATTATCCTGTTGGAAGGGATGATGCTGCTCAGCTGTCAGCATTACAGATCCTGGTTGAAATTGGGTTTATTAGCAGTCCAGAATCTTGCACTGATTGGAATTCGCTTCTGGAAAGATTCGTTCCCAGACAAATTGCCATAACAAGACCAAAGCGAGAGTGGGAGTTGGATATTCTCTCGCGTTATCGTTCCATGGAGCATCTGACAAAAGATGATGCAAGACAACAGTTTCTTCGAATATTGAGATCGCTTCCCTACGGGAATTCAGTTTTCTTTGGCATCCGCAAGATTGATGATCCCATTGGACTTCTACCTGGGCGAATAATTTTGGGTATCAACAAAAGAGGGGTTCATTTCTTCCGTCCAGTTCCGAAGGAGTATTTACATTCTGCTGAATTAAGAGATATAATGCAGTTCGGCAGCAGTAACACTGCTGTCTTTTTTAAGATGAGAGTTGCTGGTGTCCTACACATTTTCCAGTTTGAGACCAAGCAGGGAGAAGAAATATGCATTGCTTTGCAGACACACATAAATGATGTCATGTTGCGTCGTTACTCTAAAGCTAGAACTGCTGCCGTTGGCTCCATGCTTGGAGATTCTTCCAGCAATTTTAAGGCTCAAAGTGTGGAAGCATATGAGAAACGAGTTCATGAGTTGAGTAAGGGCATTGAAGAGTCTCAGAGAAATGCTGAACAGTTGCTGAAGGAATTGCATGAAAAGAATAAGCAAGAAGTGGTATTGCAAGAAGAAATGGAGACCTTAAAAGAATCCTTGAGATTTGAAAAGCAAAACTTAGCTGAGGCAACACGTAGTCTTGAGAGGCTCAGATCGCAGTATGATGAAAAAAACAAGGAGCACCAGGACATATTAACGGAAAAAAGGAGTATGGAAGCAAGAATAGCCAAGTTGAGCGCCACCGTGCTGGAAAATAATGTGGAAAAAGATACAGTCGGAATTAACGAACAGGTTCTACAAAAACTTCAGGATGAGTTGAGCCTTCGAAATGATGAGTTGCAAGCCACTGAAGAAATCAGAAAGAAACTGATGGAACATCTTAAGAAAAGCTTTGAACATGAACGCAAAGTCTCGAAGCTGAGAGTGGCAGAACTTGAGAAGAAACTTGAAGAAGACATTGACCGAAAAAATGAGCAAACAGCTAATATTTTGAAGATGCAAGGAGCTCAGTTAGCTGAGATGGAAGCGCTTTATAAGGAAGAGCAAATTTTAAGGAAACGCTATTTCAACATGATAGAAGATATGAAAGGAAAAATTCGAGTTTACTGTCGACTTAGGCCTCTTAATGAGAAAGAAATCATTGAAAAAGAAAAGAACGTGCTTAGAAGTCTGGACGAGTTCACAGTTGAACATTCGTGGAAAGATGATAAGCCGAAGCAACATATGTATGATCGTGTATTCGATGGCACTGTCTCCCAGGAAGATTATCTAGTCCAGTCTGCCGTTGATGGCTATAATGTCTGCATATTTGCTTATGGTCAAACTGGTTCTGGTAAGACCTTTACAATATATGGTTCTGAGGAGAACCCTGGATTAACACCTCGTGCCATAGGAGAGCTTTTTAGAATTTTGAAGCGTGATAGTAACAAGTTCTCGTTTTCATTGAAGGCATACATGGTAGAATTATATCAAGACACGTTAGTAGATCTTCTTTTGCCGAAGAATGCAAAACGATCGAGATTAGATATCAAAAAGGATACAAAGGGAATGGTATCCATTGAAAATGTCACAATAGCTTCTATCTCAACGTTTGAAGAATTGAAAAACATTATTTATAGAGGGTCCGAGCAACGACATACTTCCGAGACTCAAATGAACGAAGAAAGTTCAAGATCACATTTGATACTTTCAATTATAATCGAAAGCACCAACCTTCAGACGCAATCCGTTTCTAAAGGAAAGCTTAGTTTTGTTGATCTTGCGGGGTCAGAGAGAGTGAAGAAGTCAGGCTCTTCTGGTAGCCAACTTAAGGAAGCTCAAAGCATAAATAAATCACTTTCAGCACTTGGGGATGTTATCAGTGCTTTGTCTTCTGGGGGTCAGCACATACCTTACAGAAATCATAAGCTAACAATGTTGATGAGCGATTCACTCGGTGGTAACGCTAAAACGCTTATGTTTGTCAACGTCTCTCCAGCTGAATCCAACTTAGACGAGACGTACAATTCTCTCATGTACGCGTCTAGAGTTCGATCAATTGTTAACGATCCAAGCAGAAACGTAGCATCGAAAGAGGTTGCTCGACTGAAAAAACTGGTTGGTTATTGGAAAGAGCAAGCAGGTAAAAGGGGAGAGGTCGACGAGTTGGAAGAAATTCAAGACGAGCGACATTGTAAAGAGAAAGCGGATATCAGATATTCCATGTTCAAGTTTGGCGATTGTTCTCCTTCAAGGAGTGCAGCTCATGCGCGAAAGAAATTTGATACAGACAATGGCGAATTCAGATTTCAGAACCATGTAATTGAACGTTCAAGCGGCTACGAGAAGAAGAGAAACGGCAGCGAATCGGTGAAAGATCAAAGCAGCAATTTCTGTTTCTGGAGCTCGTTCTTGTTTTCCAGAATTCTCCCTTTGGAACCGGAGATGTGTGATGCGATGGAGGAACAGGAATCTGCACAAGATATTCCAGTTGCTTTAGGTGAAGGCAACCAAGTTATTTCTAAAGATGAGCTCCATGATTCTCTCCCTTTGCCAGCTGAGGCAACTCCGAACTCTTGTGAAAATAAGATCGATTCACCTGAAACTCATGTACAGGAAGTCGTACCTCCGGAGGATAATTTAGATAAATCTACGATTCCTCAGCAATCAAATCAAGATTCTGCGAATTCACTTCCCAATCACGACCAAGAATTGGTTAAGCCTGATGCAGAACCTGCTTCTGATGTCAAGACTGGGCCTGATGAGTTGCCCCCAAGGGAGTTGGGTCTAGATGCTGCTACTTCCAACACTCACCTGGAAACCGTACATTCCTCCTTGGATGCTGAGGCCTTTGGGATGCCTGAAACTAAAACAGGTTCTCTTGATGATGCTTCAACAGCCAATCATGATGAACCTGTAACTCCCCATCCCGTCTCATCATGTATTAAAGCTGAAACAGAGAATGCCATAGAATTGAAGGTCAATGAAGACAACGTTGCTACACCTCACAATGGGCATTCAAATACGAATCACTCGTTTATTTTGGATGAAAATCAAATTGCTGAAGGTAGTGAATCAGGAACAGAAGAAGAGCAATCTGCTTTCATGAAGGAGCTTGAGAATTTCTTCAGAGAAAGAGGCATGGAATTCAAGCCTCCCAAGTTTTATGGAGAAGGACTGAATTGCCTCAAGTTATGGAGGGCTGTGACTAGATTGGGGGGCTATGACAAGGTATTTGTTTATGGGAAGAAACACAGGCTCATACTAACTGAGAGGACATGTACAACAGTTTCATGGACATTTCGAGGATTTTATGAGAAGGCTGTCCTTGATTACGAGAGGCATAAAACCCATGGTGGCGAACTTAGGGTACCTATTGCTTCCAACTCAGAACCTATGAGCATCGAAAACCAGGGATCAGGATCAGGTAGAGCACGAAGAGATGCTGCTGCACGTGCCATGCAGGGTTGGCACTCGCAACGTCTTCTGGGAAATGGTGAAGATAAGAACTCACCTTCAATGCAGAAAAAGGAAAAACAACTCAAAGGCATTGGTGGAATTCTTAAACGTAAGAAACCGTCTTACATGGAGCATACTGTGAAATCAGCACGAACAAAATCATCAAAACCACAGTTGGATGTAGCAGTAGTTGATATTGGACAACCAGCTGATTGGGTCAAGGTCAATGTGCAGAAAACTGTGCGCGTTCAGTCCGATCCAGCAGGACGCTTGGTTATTAGTGGTGAACCTGAACATCCTGATAATCCATGGGGAGTCACGCCCTTTAAAAAGGTCCTTGCCCCTCCCCCTTATTTGAGCCGTAACCAGTCTTCTCAATCCAAATCAATTCATCTCCAGTTCTATGCTCTTTCAAGAATGTTTGGCTCTCATCCGATCGTTTTTGTTAGACAGGCATGGGATACCCATTTCAAGGAGATGAAAAAAGCTCGGTCGCAGAGCAATCAGGACCCCTCAAAAGACCTATGCCTCTCGTTATTTGGGGAAAGGCCAGAATTCATCGAAGGATCAGACCACAGCACATCACCTGGTATTAAATTCAAGCCTTCCCATGGGGGATCAAGAACCGATCTTCTAGCTTTGAATAGTTCCTCCAAAGAATCAAGAGATAACCCATTGGCTTCAGGATTTAAGTTCATTCTGCGTCCTTTTTTCCCTTTTGATCTTTTAGATGAAGGCACTGATACGCTGCGGAAAAGTTCCCCATGA | 5295 | 42.23 | MTFDMAQSARTMSSSFNSSSGNDDALLQSFAAASNGDDYDSDGSNFAPPTPTTISMAIPAELAGVIPLIDKFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVREKFTFEDMLQYLIKAWELMYLCASAMPPSKDIGGYLSEYVHNVAQGSSTDSEVRVFALNTLNALKRCMKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMTTTVADSVEELSGIIKLSAHSSFSLFECRKIVSGAKALDLGNEFKAAKDRSKGEILHFKLTFKKKLFRESDEAVADPMFIQLSYLQHDYLLGNYPVGRDDAAQLSALQILVEIGFISSPESCTDWNSLLERFVPRQIAITRPKREWELDILSRYRSMEHLTKDDARQQFLRILRSLPYGNSVFFGIRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICIALQTHINDVMLRRYSKARTAAVGSMLGDSSSNFKAQSVEAYEKRVHELSKGIEESQRNAEQLLKELHEKNKQEVVLQEEMETLKESLRFEKQNLAEATRSLERLRSQYDEKNKEHQDILTEKRSMEARIAKLSATVLENNVEKDTVGINEQVLQKLQDELSLRNDELQATEEIRKKLMEHLKKSFEHERKVSKLRVAELEKKLEEDIDRKNEQTANILKMQGAQLAEMEALYKEEQILRKRYFNMIEDMKGKIRVYCRLRPLNEKEIIEKEKNVLRSLDEFTVEHSWKDDKPKQHMYDRVFDGTVSQEDYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSEENPGLTPRAIGELFRILKRDSNKFSFSLKAYMVELYQDTLVDLLLPKNAKRSRLDIKKDTKGMVSIENVTIASISTFEELKNIIYRGSEQRHTSETQMNEESSRSHLILSIIIESTNLQTQSVSKGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSRNVASKEVARLKKLVGYWKEQAGKRGEVDELEEIQDERHCKEKADIRYSMFKFGDCSPSRSAAHARKKFDTDNGEFRFQNHVIERSSGYEKKRNGSESVKDQSSNFCFWSSFLFSRILPLEPEMCDAMEEQESAQDIPVALGEGNQVISKDELHDSLPLPAEATPNSCENKIDSPETHVQEVVPPEDNLDKSTIPQQSNQDSANSLPNHDQELVKPDAEPASDVKTGPDELPPRELGLDAATSNTHLETVHSSLDAEAFGMPETKTGSLDDASTANHDEPVTPHPVSSCIKAETENAIELKVNEDNVATPHNGHSNTNHSFILDENQIAEGSESGTEEEQSAFMKELENFFRERGMEFKPPKFYGEGLNCLKLWRAVTRLGGYDKVFVYGKKHRLILTERTCTTVSWTFRGFYEKAVLDYERHKTHGGELRVPIASNSEPMSIENQGSGSGRARRDAAARAMQGWHSQRLLGNGEDKNSPSMQKKEKQLKGIGGILKRKKPSYMEHTVKSARTKSSKPQLDVAVVDIGQPADWVKVNVQKTVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVLAPPPYLSRNQSSQSKSIHLQFYALSRMFGSHPIVFVRQAWDTHFKEMKKARSQSNQDPSKDLCLSLFGERPEFIEGSDHSTSPGIKFKPSHGGSRTDLLALNSSSKESRDNPLASGFKFILRPFFPFDLLDEGTDTLRKSSP | 1764 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 852031 | 873210 | - | CmaCh06G001730.1 | Cma06g00173 | 295727 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma06g00173 | 1764 | Gene3D | - | 194 | 281 | - | - | |
Cma06g00173 | 1764 | CDD | ARID | 1390 | 1469 | - | - | |
Cma06g00173 | 1764 | Coils | Coil | 658 | 692 | - | - | |
Cma06g00173 | 1764 | MobiDBLite | consensus disorder prediction | 1234 | 1285 | - | - | |
Cma06g00173 | 1764 | ProSiteProfiles | ARID domain profile. | 1385 | 1473 | IPR001606 | GO:0003677 | |
Cma06g00173 | 1764 | MobiDBLite | consensus disorder prediction | 1238 | 1257 | - | - | |
Cma06g00173 | 1764 | Pfam | FERM central domain | 284 | 396 | IPR019748 | - | |
Cma06g00173 | 1764 | MobiDBLite | consensus disorder prediction | 1302 | 1334 | - | - | |
Cma06g00173 | 1764 | Pfam | ARID/BRIGHT DNA binding domain | 1388 | 1469 | IPR001606 | GO:0003677 | |
Cma06g00173 | 1764 | Gene3D | - | 290 | 389 | IPR014352 | - | |
Cma06g00173 | 1764 | Gene3D | - | 1046 | 1094 | - | - | |
Cma06g00173 | 1764 | Gene3D | Kinesin motor domain | 715 | 1045 | IPR036961 | - | |
Cma06g00173 | 1764 | Gene3D | MyTH4 domain | 101 | 192 | IPR038185 | - | |
Cma06g00173 | 1764 | CDD | KISc_C_terminal | 726 | 1045 | - | - | |
Cma06g00173 | 1764 | CDD | FERM_C_KCBP | 393 | 499 | - | - | |
Cma06g00173 | 1764 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 102 | 1072 | - | - | |
Cma06g00173 | 1764 | Pfam | MyTH4 domain | 115 | 188 | IPR000857 | GO:0005856 | |
Cma06g00173 | 1764 | SMART | B41_5 | 191 | 396 | IPR019749 | - | |
Cma06g00173 | 1764 | ProSiteProfiles | MyTH4 domain profile. | 1 | 190 | IPR000857 | GO:0005856 | |
Cma06g00173 | 1764 | SUPERFAMILY | PH domain-like | 396 | 484 | - | - | |
Cma06g00173 | 1764 | Gene3D | - | 394 | 501 | IPR011993 | - | |
Cma06g00173 | 1764 | Pfam | Kinesin motor domain | 734 | 1043 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cma06g00173 | 1764 | SUPERFAMILY | ARID-like | 1380 | 1483 | IPR036431 | GO:0003677 | |
Cma06g00173 | 1764 | SMART | kinesin_4 | 726 | 1051 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cma06g00173 | 1764 | SMART | ARID_2 | 1382 | 1469 | - | - | |
Cma06g00173 | 1764 | MobiDBLite | consensus disorder prediction | 1260 | 1280 | - | - | |
Cma06g00173 | 1764 | Coils | Coil | 629 | 649 | - | - | |
Cma06g00173 | 1764 | PRINTS | Kinesin heavy chain signature | 993 | 1014 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cma06g00173 | 1764 | PRINTS | Kinesin heavy chain signature | 794 | 815 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cma06g00173 | 1764 | PRINTS | Kinesin heavy chain signature | 944 | 962 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cma06g00173 | 1764 | PRINTS | Kinesin heavy chain signature | 913 | 930 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cma06g00173 | 1764 | Coils | Coil | 514 | 604 | - | - | |
Cma06g00173 | 1764 | MobiDBLite | consensus disorder prediction | 1487 | 1535 | - | - | |
Cma06g00173 | 1764 | ProSitePatterns | Kinesin motor domain signature. | 943 | 954 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Cma06g00173 | 1764 | SUPERFAMILY | Prismane protein-like | 677 | 751 | IPR011254 | GO:0003824|GO:0016491 | |
Cma06g00173 | 1764 | ProSiteProfiles | Kinesin motor domain profile. | 728 | 1043 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cma06g00173 | 1764 | ProSiteProfiles | FERM domain profile. | 195 | 490 | IPR000299 | GO:0005856 | |
Cma06g00173 | 1764 | SUPERFAMILY | Second domain of FERM | 276 | 391 | IPR035963 | - | |
Cma06g00173 | 1764 | SMART | bright_3 | 1386 | 1474 | IPR001606 | GO:0003677 | |
Cma06g00173 | 1764 | CDD | FERM_B-lobe | 293 | 389 | IPR019748 | - | |
Cma06g00173 | 1764 | Gene3D | - | 1369 | 1485 | IPR036431 | GO:0003677 | |
Cma06g00173 | 1764 | PANTHER | KINESIN-LIKE PROTEIN | 102 | 1072 | - | - | |
Cma06g00173 | 1764 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 728 | 1072 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g02043 | Cma-Chr1:12993973 | Cma06g00173 | Cma-Chr6:852031 | 8.40E-77 | dispersed | |
Cma06g00173 | Cma-Chr6:852031 | Cma05g01136 | Cma-Chr5:8883021 | 2.13E-79 | dispersed | |
Cma16g01291 | Cma-Chr16:9774416 | Cma06g00173 | Cma-Chr6:852031 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
35146 | PF00225 | Kinesin | 1.50E-99 | CL0023 | Cma | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma06g00173 | - | - | csv:101206704 | 1709.89 |