Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00359 ATGGGAAGGAAAGGAAATTGGTTTAAAACTTTGAAGAAAGCTCTCAGCCCCAGCTCCAAAAGGAAGAAAGACCAGAAAACTAAATTGTCTGGAAAACAAAAACACCCCAGTGTATGTTCTACTCCTACATTGACTATTGCAAATCAGATAACTCAGCAAGAAAAGGTAAAATCGACCTGTGAGGAGAATGAAGACCACTGCAAAGCTCATTCTGTTCCAATTTCGAATTCCACGGGCATGGCTTCTACAGCTGGCACACAGGTTGTCCAGACCACTACTGTGACTCAATTCACCAGAAAATCTAGAGAGGAAACGGCAGCAATCAAGATTCAATCAGTTTTTCGTGGATATCTGGCAAGATCAGAAATACGAACCTTAAGAGGGCTGTTGAGGTTGAAATTATTGATGGAGAGTTCAGTTCTGAATCGTCAAGCCATGAACACCATCCGGTGTATGCAAGTTTTTGTCCGTGTCCATTCCCAGATCCGATCAAGAAGGTTGAGGAAGCTGGAGGAAAATCAGGCTCTCCAGAAACAACTCCTACAAAAACATACAAAAGAACAAGAGACTTCTCAGGTTGGGAAAGGGTGGAACGACAGCACACAATCAAAGGAGCAAGTTGAGGCTAAACTACTAAGCAAGCATGAAGCAGCTATGAGAAGAGAGAGAGCATTGGCTTATGCCTTTTCTCGACAGAAAATCTGGAGAAATTCTTCGAGGTCAACAATTACACTATTCACAGATCCGAACAATCCCACCTGGGGATGGAGCTGGTTGGAGAGATGGATGGCAGCTCAACAATGGGGGGATGCGAGCCCTGGTAATGTTTGTGGAGAAATTAATAAAGCCGATGCTCAATCCAAACAGAGCTCGGAGATAAATTCGCCAACAGTAAGCCGATCTGAAAGCCGTAGATATACCTTCCAGCCCCTCACGATTCATTCCAGACGTAGATCAGTGGCAGAGGCGAATCAACTGAAGCCATCAAGCACACGAAAGAGCTCAGTTCTAGATGATTCTCTCGAAGCTAATGCTCAATTTGAACTGAGCTCGGAGGCGAATTCGTCAACAGCAAGCCGATCCGAGAGCCGCAGGTATACTTTCCAGTCCTTCTCAACTTCTTCCAGACAAAGTTCAGTCGCAGAGCCAAAGAAATTGAAATCATCAACCATAAAAAAGAACTCGGTTCCAGAAATTGAAGGATTCCAGCTGACCTCGAAGGCAAATTCGCCAACAGCAAGTCGATCCGAGAGCCACAGATATACCTTCCCGTCCCTCTCAACGCCTTCTCCGCGAAGATCAGTCGCAGAGGCAATGAAATCAAAGCAATTAGGCGCCAGAAATAGCACGATTCCAGATGATGACAGCAAGAGCCTGGCAAGTATAAAATCAAACAATGGAGGACCTCGATCATCCGTATGGGACGAAGAAAGCCAAAACAGTTCACAAAATTTTCCGAGTTACATGACGTTCACCTCATCGGCAAGAGCCAAATCGAAGCTTCATACTCCATTTGAGTTGGAGAAGAATGAAGCTCGAGAAATAACGTCGTTTAGTTCATCTGCTAAGAAACAACTCTTGTATCCGCCATCTCCGGCCGGGTCGAGGCGCTATTTCAACCGTCTGAAGGTGGATATAGCGGCTTGA 1647 45.29 MGRKGNWFKTLKKALSPSSKRKKDQKTKLSGKQKHPSVCSTPTLTIANQITQQEKVKSTCEENEDHCKAHSVPISNSTGMASTAGTQVVQTTTVTQFTRKSREETAAIKIQSVFRGYLARSEIRTLRGLLRLKLLMESSVLNRQAMNTIRCMQVFVRVHSQIRSRRLRKLEENQALQKQLLQKHTKEQETSQVGKGWNDSTQSKEQVEAKLLSKHEAAMRRERALAYAFSRQKIWRNSSRSTITLFTDPNNPTWGWSWLERWMAAQQWGDASPGNVCGEINKADAQSKQSSEINSPTVSRSESRRYTFQPLTIHSRRRSVAEANQLKPSSTRKSSVLDDSLEANAQFELSSEANSSTASRSESRRYTFQSFSTSSRQSSVAEPKKLKSSTIKKNSVPEIEGFQLTSKANSPTASRSESHRYTFPSLSTPSPRRSVAEAMKSKQLGARNSTIPDDDSKSLASIKSNNGGPRSSVWDEESQNSSQNFPSYMTFTSSARAKSKLHTPFELEKNEAREITSFSSSAKKQLLYPPSPAGSRRYFNRLKVDIAA 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1669757 1673249 - CmaCh06G003590.1 Cma06g00359 295913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00359 548 MobiDBLite consensus disorder prediction 392 434 - -
Cma06g00359 548 MobiDBLite consensus disorder prediction 273 303 - -
Cma06g00359 548 MobiDBLite consensus disorder prediction 1 38 - -
Cma06g00359 548 MobiDBLite consensus disorder prediction 319 338 - -
Cma06g00359 548 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 423 545 - -
Cma06g00359 548 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 316 - -
Cma06g00359 548 MobiDBLite consensus disorder prediction 443 487 - -
Cma06g00359 548 Coils Coil 167 187 - -
Cma06g00359 548 MobiDBLite consensus disorder prediction 348 385 - -
Cma06g00359 548 MobiDBLite consensus disorder prediction 282 303 - -
Cma06g00359 548 SMART iq_5 102 124 IPR000048 GO:0005515
Cma06g00359 548 MobiDBLite consensus disorder prediction 191 207 - -
Cma06g00359 548 MobiDBLite consensus disorder prediction 181 208 - -
Cma06g00359 548 Gene3D - 92 133 - -
Cma06g00359 548 PANTHER IQ-DOMAIN 5-RELATED 423 545 - -
Cma06g00359 548 PANTHER IQ-DOMAIN 5-RELATED 1 316 - -
Cma06g00359 548 MobiDBLite consensus disorder prediction 348 487 - -
Cma06g00359 548 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Cma06g00359 548 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00359 Cma07g00937 CCT
Cma06g00359 Cma07g00937 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02600 Cma-Chr4:17780558 Cma06g00359 Cma-Chr6:1669757 5.55E-09 dispersed
Cma06g00359 Cma-Chr6:1669757 Cma15g00434 Cma-Chr15:1943695 6.68E-09 dispersed
Cma03g01253 Cma-Chr3:8249643 Cma06g00359 Cma-Chr6:1669757 2.25E-18 wgd
Cma06g00359 Cma-Chr6:1669757 Cma07g00937 Cma-Chr7:4504725 6.12E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00359 - - cmax:111498714 1015.37