Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00368 ATGGTTAATTTCTCTCCATTTTCCACTGCTGGCATTTTCAATTCCGCCGCCGCCGCCGCTGCCGCCGCCACAGAGTTCGACTTCGGCACCGTCGCCCTCAGTAGCTTGAAGCTCCTTGGCGATGCTCACTTAAATAACGGAAGCGTGATGCTTACGCGAGACCTTGCCGTCCCCAACTCCGGCGCTGGCAGAGTCCTCTACGCCCAACCTATCAGATTCCGGCAGACAGGGATTGACTACCTCGCCAGTTTCTCCACATTTTTCTCCTTCTCCATTACGAATCTCAACCCTTCGTCGATAGGCGGCGGGCTGGCGTTTGTAATCTCGCCGAACGCCGACACTGTCGGCGGCGCAGGAGGGTTCTTGGGCCTGGCCGACGAGAGGGGATTGGGATTCGTGGCGGTGGAATTTGACACGTTGATGGATGTCGAATTTAAGGATATTAATGGGAACCATGTCGGATTGGATCTGAACGACATGGTTTCGTTGCAGGTTAAAGATCTGGATGGAATTGGAATCGATCTCAAAAGCGGCGATACGGTGAATTCTTGGATTCAATACGATGGGTCGTCTCGGATCTTTGAAATTTTCGTTTCTTATTCGAATTTGAAACCGACAGAACCTTTGTTGTCATTCAATCTCGATCTCGACCCGTATTTGAACGATTTTATGTATGTCGGATTTTCCGGTTCGACTCAGGGGAGTACGGAAGTTCACAGTGTGGACTGGTGGAGTTTTACGTCGTCGTTTGACTCAAATTACCCACCGGGGGCGGTTCCCCCGCCACCGACGACGACGCTGATGAACCCAGCAGCCAATATCGCCCAGTCACCGCCGCCGACGCAGCCACCGTCAGGGTCAAATTCTGTCACGCAGAAGGACACCAAGTCGCCGTCCTGCCACAACGGACTCTGTAAGCAAAACGCCGGCGCAGTTGTCGGAGTAGTGACGGCGGGGGCGTTTGTTTTAGCATTATTTGCTGGTGGGTTAATCTGGGTATATTCCAAAAATATCAAACGGGTGAAAAAAGCAGACTCCCTCACTTCAGAAATCATCAAAACGCCGAAGGAATTCACTTACAAAGAGCTCAAAATCGCCACGAAATGTTTCAATTCTAATAGAATCATCGGCCATGGCGCTTTTGGGACTGTTTATAAAGGGATTATGCCGGAAACCGGCGACATTGTGGCGGTGAAACGGTGCAGCCATAGTACACAAGGGAAGACCGAATTTCTCTCTGAACTTTCGATCATCGGAACTCTCCGCCACCGGAATTTGGTCCGTCTTCAAGGATGGTGTCACGAAAAGGGCGAAATTCTGCTAGTTTACGATTTAATGCCAAATGGGAGTTTGGATAAAGCTCTATTCGAGGCCAGAACGCCGCTGCCGTGGCCTCACCGGAGAAAAATCCTCCTCGGCGTCGCCTCCGCGTTGGCGTATTTGCATCAAGAATGTGAAAATCAGGTCATTCACAGAGACATTAAAACCAGTAACATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGGTTGGCCCGACAAGTGGAGCACGATAAATCACCGGACGCCACCGTCGCCGCCGGCACAATGGGGTATTTAGCCCCGGAATATCTCCTCACCGGCCGGGCGACGGAAAAAACCGACGTATTCAGTTTCGGCGCCGTAGTACTAGAAGTAGCCAGCGGTAGACGGCCAATCGAGAAAGAGACGGTTTCCGCCGCCCGCGGCGGAAAATTTGGCGTCAACAGTAATTTGGTCGACTGGGTTTGGAGTTTACACCGGGATGGACGGTTATTGACGGCTGCCGACGGGAGACTCAGCGGCGAGTTTGAGGAATCAGAGATGAGGAAAGTTTTGTTAGTCGGGTTGGCTTGTTCGCACCCGGATCCAATGACCCGACCCACAATGAGAGGCGTAGTGCAAATGTTAATCGGCGATTCAGATATTCCGATCGTCCCTCGGGCTAAACCGTCGTCTAGTTTCAGCACCGCCCAATTGCTTCTCACTTTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCCATTTCTACTTCCTCGTCCGAGGTGAGTTTCAAAGGCATGGATCTGATCTCGCTGGATGATCGGACGGTGGAAATCCATCAAACGTCAGAATAA 2148 51.54 MVNFSPFSTAGIFNSAAAAAAAATEFDFGTVALSSLKLLGDAHLNNGSVMLTRDLAVPNSGAGRVLYAQPIRFRQTGIDYLASFSTFFSFSITNLNPSSIGGGLAFVISPNADTVGGAGGFLGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNDMVSLQVKDLDGIGIDLKSGDTVNSWIQYDGSSRIFEIFVSYSNLKPTEPLLSFNLDLDPYLNDFMYVGFSGSTQGSTEVHSVDWWSFTSSFDSNYPPGAVPPPPTTTLMNPAANIAQSPPPTQPPSGSNSVTQKDTKSPSCHNGLCKQNAGAVVGVVTAGAFVLALFAGGLIWVYSKNIKRVKKADSLTSEIIKTPKEFTYKELKIATKCFNSNRIIGHGAFGTVYKGIMPETGDIVAVKRCSHSTQGKTEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKETVSAARGGKFGVNSNLVDWVWSLHRDGRLLTAADGRLSGEFEESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDSDIPIVPRAKPSSSFSTAQLLLTLQDSVSDLNGMIAISTSSSEVSFKGMDLISLDDRTVEIHQTSE 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1705099 1707285 - CmaCh06G003680.1 Cma06g00368 295922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00368 715 CDD STKc_IRAK 376 646 - -
Cma06g00368 715 PANTHER - 14 694 - -
Cma06g00368 715 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 253 IPR013320 -
Cma06g00368 715 ProSiteProfiles Protein kinase domain profile. 370 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma06g00368 715 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 14 694 - -
Cma06g00368 715 Pfam Protein kinase domain 371 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma06g00368 715 Gene3D - 21 256 - -
Cma06g00368 715 SUPERFAMILY Protein kinase-like (PK-like) 352 673 IPR011009 -
Cma06g00368 715 MobiDBLite consensus disorder prediction 255 299 - -
Cma06g00368 715 ProSitePatterns Protein kinases ATP-binding region signature. 376 399 IPR017441 GO:0005524
Cma06g00368 715 Gene3D Phosphorylase Kinase; domain 1 332 445 - -
Cma06g00368 715 CDD lectin_legume_LecRK_Arcelin_ConA 24 250 IPR001220 GO:0030246
Cma06g00368 715 SMART serkin_6 370 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma06g00368 715 ProSitePatterns Legume lectins beta-chain signature. 133 139 IPR019825 -
Cma06g00368 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Cma06g00368 715 Pfam Legume lectin domain 25 251 IPR001220 GO:0030246
Cma06g00368 715 Gene3D Transferase(Phosphotransferase) domain 1 446 652 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00368 Cma-Chr6:1705099 Cma16g00960 Cma-Chr16:7435658 0 dispersed
Cma14g00201 Cma-Chr14:864110 Cma06g00368 Cma-Chr6:1705099 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68629 PF00069 Pkinase 1.20E-50 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00368 - - cpep:111800252 1327.77