Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00369 ATGGCGGCTAAGAACCATTTCAGCCTTCTTCTTCTCCTCCTTTTGCAGCTGTTTTATTCAGGAAGGGCCGAACTGCAAATGAATTATTATGCAAAAAGTTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTACTGAGCTCTACTATGAACATGGAAACACAGCCGTTTCGTGGCTTAGAAACCTCTTCCATGATTGCGTTGTTCAGTCTTGTGATGCATCTCTATTGTTGGAGACGACTGTGGGTGTGGAATCAGAGAAAGATTCAGACAGAAGTTTTGGGATGAGAAACTTCAAATACGTAAATAAAATCAAATCTGCCGTTGAAAATGCATGCCCTCAGACTGTTTCTTGCGCTGATATTGTTGCACTATCGGCTAGAGATGGCATCGTTATGTTGAAAGGACCGCATATCGACCTGAAAACGGGAAGAAGAGATAGCAAAATGAGCTATTCGAATCTTGTTGAAGAGTTGGTCCCAAAGCATAATGAATCTCTTGTGAATGTTCTCTCGAGGTTTAAGTCCATCGGCATTGACACGGAGGCAACAGTTGCCCTTTTAGGAGCTCATTCGGTAGGTCGAGTTCACTGCGTGAACTTAGTGGAGAGGTTGTACCCAACCGTCGACCGAACCATTGATCCAAATTACGCACAATACCTAAAAGTCCGATGCCCGACACCGAATCCCGACCCAGAAGCGGTGTTGTATTCGAGAAACGACCGTGAAACTCCAATGATTTTAGACAATATGTACTATAGAAATGTTCTTGAACACAAGGGGTTGTTGATCGTGGACCAAGAATTGGTTTCCAACCCTCTTACTCTTCCATATGTCAAGAAATTTGCCGCCGACATCAAATATTTTCACGACCAATTTTCTAGGGGAATTCGTTTGTTGTCAGAGAATAATCCGCTCACTGCCAATCAAGGTGAGATTAGGAAAGATTGTCGCTATGTTAATTAA 966 42.55 MAAKNHFSLLLLLLLQLFYSGRAELQMNYYAKSCPKAEEIIKQQVTELYYEHGNTAVSWLRNLFHDCVVQSCDASLLLETTVGVESEKDSDRSFGMRNFKYVNKIKSAVENACPQTVSCADIVALSARDGIVMLKGPHIDLKTGRRDSKMSYSNLVEELVPKHNESLVNVLSRFKSIGIDTEATVALLGAHSVGRVHCVNLVERLYPTVDRTIDPNYAQYLKVRCPTPNPDPEAVLYSRNDRETPMILDNMYYRNVLEHKGLLIVDQELVSNPLTLPYVKKFAADIKYFHDQFSRGIRLLSENNPLTANQGEIRKDCRYVN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1709568 1711596 - CmaCh06G003690.1 Cma06g00369 295923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00369 321 Pfam Peroxidase 42 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 Gene3D - 28 321 - -
Cma06g00369 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PANTHER PEROXIDASE 21 12 319 - -
Cma06g00369 321 Gene3D Peroxidase, domain 2 161 300 - -
Cma06g00369 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 PANTHER PEROXIDASE 25-RELATED 12 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma06g00369 321 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
Cma06g00369 321 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00369 Cma14g00201 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00369 Cma-Chr6:1709568 Cma14g00201 Cma-Chr14:864110 3.33E-165 dispersed
Cma13g00738 Cma-Chr13:6528604 Cma06g00369 Cma-Chr6:1709568 1.99E-135 transposed
Cma03g01247 Cma-Chr3:8234595 Cma06g00369 Cma-Chr6:1709568 9.33E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00369 K00430 - csv:101215428 565.074