Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00426 ATGGGTACTCATGGCCGAAGCAGTGAGAGAAAGAGAGAGAAGACGTCATCTTCGAGGAGACGTAGCAGAAGAAGGTCTGACGACTCTGAATCCGATTCCGACGACTCAGATAGCCGGGATTCATCTCCAGTGGCGAGCTCCCGGAAGCGCATGGAAAGATGTGGTGGTAGCAGGAGCAGTCACCGGAGTAGACGAAGGAGCTCCTCTCGTGGGCGGGATTCTGGAGACGATAGTTCGAATGATAGTTATGGCAGCGATGATGGTGGTCGCAAGAAGAGTAAGTCTTCCAGGAAAGTTACTGAAGAGGAAATTAGCGAATACTTGGCCAAGAAAGCGCAGAAAAAGGCCTTGCGAGTTGCCAAGAAATTGAAGTCCCAGACGGTTTCTGGTTATTCCAACGATTCGAATCCATTTGGCGATTCCAATCTCAATGAAAAATTTGTATGGCGAAAGAAAATTGAGCGTGATGTTACACAAGGTGTGTCGCTTGATGCCTTTTCAATGAAGTCCGAGAAAAAAAGACAGAGAGAAAGAATGGCAGAGATTGAAAAGGTGAAGAAAAGGAGGGAGGAAAGGGCTCTTGAAAAAGCACAACATGAGGAAGAAATGGCATTGCTAGCTAGAGAACGTGCTCGTGCTGAATTTCAGGATTGGGAGAAAAAGGAAGAAGAGTTCCATTTTGATCAAAGCAAAATCAGATCAGAGATAAGAGTTCGTGATGGGCGTTCGAAGCCTATTGATATTCTATCCAAGCAACTGAATGGATCGGATGATTTTGATATAGTAATCAATGAGCCATACACTGTATTCAAGGGTTTGACTGTGAAAGAAATGGAAGATCTTCGTGATGACATCAAAATGCATCTTGATCTGGACAGGGCGACGCCTACACATATCGAGTATTGGGAGGCACTTCTCGTAGTTTGTGATTGGGAACTAGCTGAAGCTCGAAAAAAGGATGCTCTGGATAGAGCCAGAGTTCGTGGTGAGGAGCCTCCTGCTGAGTTGCTTGCAGAAGAAAGGGGTCTGCATTCTAGCATTGAAACAGATGTCAGAAATCTTCTGGAAGGAAAGACTTATGGTGAATTGGAGGCGTTACAATCTCAGATTGAGTCACAGATGCGATCTGGAACTGCAAAGGTGGTCGAGTACTGGGAGGCTGTCATAAAGCGCCTTCATATATACAAGGCCAAGGCTTGCTTGAAGGAGATTCATACGAAAAAACTGCATGAGCATCTTGTACGCCTTGAGCAACCTTTCGAGGATGATGAAGAAAAGGTGGACCAGGAAATCGAGATGGAAACTGAACGCTCTTTACAAGTGAAAGCTGAAGAGGAAGAGCTTGATATTAAAGCAGCTGAAACATATTCGCCTGATCTCCTTGAGGAAGAAGAGAATGAAGAAGCTGGATCATTTTCACCGGAACTTATTCATGGTGATGAAGATGAACAGGCGATTGATCCTGAGGAGGATAGGGCCATACTGGAACGTAAACGAATTGCTGTCTTGGAAGAACAGCAGAGACGGATTCAAGAAGCAATGGCCACAAAACCTGCTCCACCAGAGGATAATTTTGAGCTTAAAGCCTCAAAAGCAATGGGAGTCATGGAGGAAGGCGATGCAGTTTTTGGATCTGGTGCTGAAGTGAACCTGGATTCACAGGTATATTGGTGGCATGACAAATATCGGCCAAGAAAACCGAAATATTTCAATCGGGTTCACACAGGATACGAGTGGAACAAATACAACCAGACTCACTATGATCATGACAATCCACCTCCAAAGATTGTCCAAGGATATAAGTTTAACATCTTCTATCCAGACCTTGTTGACAAGACAAAAGCTCCAACTTACACCATTGAAAAGGATGGAAACAGCAGCGAGACATGTATCATAAGGTTCCACGCGGGGCCGCCGTATGAGGATATTGCATTTCGAATCGTAAACAAAGAATGGGAGTACTCTCATAAGAAGGGGTTTAAGTGCACATTTGAGCGTGGTAACACAATGCTAGTCATAGCATGTGTTCTTTGTGTTGGCGCATGTTGCTCGGTTACTATCTCCTTCGAGGTCTTGGTTGTAACTTTACCAACTAGATTGAAATCATCCATCGCAAAGTCTTCCTTGTAA 2130 44.6 MGTHGRSSERKREKTSSSRRRSRRRSDDSESDSDDSDSRDSSPVASSRKRMERCGGSRSSHRSRRRSSSRGRDSGDDSSNDSYGSDDGGRKKSKSSRKVTEEEISEYLAKKAQKKALRVAKKLKSQTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGVSLDAFSMKSEKKRQRERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKIRSEIRVRDGRSKPIDILSKQLNGSDDFDIVINEPYTVFKGLTVKEMEDLRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEEPPAELLAEERGLHSSIETDVRNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVIKRLHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEKVDQEIEMETERSLQVKAEEEELDIKAAETYSPDLLEEEENEEAGSFSPELIHGDEDEQAIDPEEDRAILERKRIAVLEEQQRRIQEAMATKPAPPEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGNTMLVIACVLCVGACCSVTISFEVLVVTLPTRLKSSIAKSSL 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1960354 1965912 + CmaCh06G004260.1 Cma06g00426 295980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00426 709 MobiDBLite consensus disorder prediction 125 139 - -
Cma06g00426 709 Pfam Conserved mid region of cactin 208 405 IPR018816 -
Cma06g00426 709 MobiDBLite consensus disorder prediction 1 58 - -
Cma06g00426 709 SMART CactinC_cactus_3 558 680 - -
Cma06g00426 709 MobiDBLite consensus disorder prediction 1 139 - -
Cma06g00426 709 PANTHER BNAC05G02180D PROTEIN 1 668 - -
Cma06g00426 709 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 1 668 - -
Cma06g00426 709 MobiDBLite consensus disorder prediction 69 113 - -
Cma06g00426 709 Coils Coil 172 216 - -
Cma06g00426 709 Pfam Cactus-binding C-terminus of cactin protein 558 672 IPR019134 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00426 K25058 - csv:101205416 1093.18