Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00432 ATGGGGGCTTCGCTCTCGAACTTGAGTGAAGTAGCCAATGGCTCCACCATCGGTCCTGGCCTTGGCGACATACCGGAGAGTTGTGTCGCCTGTGTTTTTCTTTACCTTACTCCGCCGGAGATTTGTAACCTCGCTCGGCTTAACAGGGCGTTTCGCGGCGCCGCTTCATCGGATGCCGTTTGGGAATCGAAATTGCCCTCGAATTATCAAGATCTTCTCGATTTGTTGCCCCCCGAACGGTACCAAAATCTGTCAAAAAAGGATATCTATGCTCTGCTATCTCGTCCAGTTCCATTCGATGGTGGAAATAAGGTGGAGGTGTGGCTGGATAGAATCACTGGAAGGATTTGCATGTCGATATCAGCTAAGGCCATGGCTATTACAGGAATTGATGACAGAAGATACTGGAATTGGATTCCTACTGAAGAGTCTCGGTTAGATTTGGATTGTTCTTAG 456 48.46 MGASLSNLSEVANGSTIGPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASSDAVWESKLPSNYQDLLDLLPPERYQNLSKKDIYALLSRPVPFDGGNKVEVWLDRITGRICMSISAKAMAITGIDDRRYWNWIPTEESRLDLDCS 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2000335 2003285 - CmaCh06G004320.1 Cma06g00432 295986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00432 151 PANTHER F-BOX PROTEIN PP2-A15 1 148 - -
Cma06g00432 151 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 148 - -
Cma06g00432 151 Pfam Phloem protein 2 116 146 IPR025886 -
Cma06g00432 151 SUPERFAMILY F-box domain 8 91 IPR036047 GO:0005515
Cma06g00432 151 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00432 Cma14g00257 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00432 Cma-Chr6:2000335 Cma16g01005 Cma-Chr16:7742864 1.02E-47 dispersed
Cma06g00432 Cma-Chr6:2000335 Cma14g00257 Cma-Chr14:1120366 1.98E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00432 - - vri:117920370 275.018