Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cma06g00605	ATGTTTACATGCATAGCATGTACGAAACAGACAGACGACGGGGGTGAGGATGGGGCTGCGCGTGGTAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATTAAGGACATGGCGTTGAAATTCTCTGGTGCTTATAGGCAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAAAGACCTTACCCAGATTTTGACACTGCTTCAGAAGGGGTTCCATACCCCTACATAGGAGGGGCAAGTGCAAGTTCAACACCTGCCTGGGACTTCCCTCCTGTCAATCGCCACCCACATACGAGATCTGCCTCGAGATTTAAAGGGGTGTTCAGAGGAGACCAGACCCCTGGAGCCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCGATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGCGAAAACTATGACAGAATAACGGAGCTCTATAATGTCCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACTGAGGATGAGAGGGATTCTTCTTACTCAAAGATGGAAAGGGATAGCCCAATGACTGCAGCGAACAAAGATTGGGCACTGAAAAACCACAAACCTTCAGGAAGTAAAGGTTATTTTCCATCTGACCAGCATTTTGATCATGGAAGCAGCCATCACTATGCAGGGTCAAGTGCCTATCCAACCGGGGGCGCCAAAGGCGACATGTCATCTATGGAAGCCTCACGCACAACTACCTCTTCTAGAGACGAACCTTCAATTTCCGTTAGCAATGCAAGCGACATCGAGGCCGAATGGGTCGAGGAAGACGAACCAGGAGTCTACATAACAATCAGGCAGCTTGTTGATGGCTCTAGAGAGCTTCGTCGTGTCAGATTCAGCCGTGAAAGGTTCGGGGAGGTGAACGCAAAGCAATGGTGGGAACAGAACAGGGAGAGAATCCAAGCTCAATACCTATAA	1089	49.04	MFTCIACTKQTDDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHTRSASRFKGVFRGDQTPGADSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFDREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDERDSSYSKMERDSPMTAANKDWALKNHKPSGSKGYFPSDQHFDHGSSHHYAGSSAYPTGGAKGDMSSMEASRTTTSSRDEPSISVSNASDIEAEWVEEDEPGVYITIRQLVDGSRELRRVRFSRERFGEVNAKQWWEQNRERIQAQYL	362

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
6	2928656	2932678	-	CmaCh06G006050.1	Cma06g00605	296159

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cma06g00605	362	MobiDBLite	consensus disorder prediction	203	298	-	-
	Cma06g00605	362	MobiDBLite	consensus disorder prediction	281	298	-	-
	Cma06g00605	362	MobiDBLite	consensus disorder prediction	11	30	-	-
	Cma06g00605	362	ProSiteProfiles	BRX domain profile.	307	362	IPR013591	-
	Cma06g00605	362	Pfam	Transcription factor BRX N-terminal domain	23	56	IPR027988	-
	Cma06g00605	362	Pfam	Transcription factor regulating root and shoot growth via Pin3	306	361	IPR013591	-
	Cma06g00605	362	Pfam	Transcription factor regulating root and shoot growth via Pin3	142	196	IPR013591	-
	Cma06g00605	362	PANTHER	PROTEIN BREVIS RADIX-LIKE 1	1	362	IPR044532	-
	Cma06g00605	362	MobiDBLite	consensus disorder prediction	209	223	-	-
	Cma06g00605	362	ProSiteProfiles	BRX domain profile.	142	197	IPR013591	-
	Cma06g00605	362	PANTHER	BREVIS RADIX-LIKE PROTEIN-RELATED	1	362	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Cma06g00605	Cma16g01211	CST

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Cma06g00605	Cma-Chr6:2928656	Cma08g00789	Cma-Chr8:4760442	5.16E-111	dispersed
	Cma16g01211	Cma-Chr16:9181602	Cma06g00605	Cma-Chr6:2928656	0	wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cma06g00605	-		-	mcha:111014865	701.049