Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00605 ATGTTTACATGCATAGCATGTACGAAACAGACAGACGACGGGGGTGAGGATGGGGCTGCGCGTGGTAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATTAAGGACATGGCGTTGAAATTCTCTGGTGCTTATAGGCAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAAAGACCTTACCCAGATTTTGACACTGCTTCAGAAGGGGTTCCATACCCCTACATAGGAGGGGCAAGTGCAAGTTCAACACCTGCCTGGGACTTCCCTCCTGTCAATCGCCACCCACATACGAGATCTGCCTCGAGATTTAAAGGGGTGTTCAGAGGAGACCAGACCCCTGGAGCCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCGATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGCGAAAACTATGACAGAATAACGGAGCTCTATAATGTCCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACTGAGGATGAGAGGGATTCTTCTTACTCAAAGATGGAAAGGGATAGCCCAATGACTGCAGCGAACAAAGATTGGGCACTGAAAAACCACAAACCTTCAGGAAGTAAAGGTTATTTTCCATCTGACCAGCATTTTGATCATGGAAGCAGCCATCACTATGCAGGGTCAAGTGCCTATCCAACCGGGGGCGCCAAAGGCGACATGTCATCTATGGAAGCCTCACGCACAACTACCTCTTCTAGAGACGAACCTTCAATTTCCGTTAGCAATGCAAGCGACATCGAGGCCGAATGGGTCGAGGAAGACGAACCAGGAGTCTACATAACAATCAGGCAGCTTGTTGATGGCTCTAGAGAGCTTCGTCGTGTCAGATTCAGCCGTGAAAGGTTCGGGGAGGTGAACGCAAAGCAATGGTGGGAACAGAACAGGGAGAGAATCCAAGCTCAATACCTATAA 1089 49.04 MFTCIACTKQTDDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHTRSASRFKGVFRGDQTPGADSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFDREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDERDSSYSKMERDSPMTAANKDWALKNHKPSGSKGYFPSDQHFDHGSSHHYAGSSAYPTGGAKGDMSSMEASRTTTSSRDEPSISVSNASDIEAEWVEEDEPGVYITIRQLVDGSRELRRVRFSRERFGEVNAKQWWEQNRERIQAQYL 362
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 2928656 2932678 - CmaCh06G006050.1 Cma06g00605 296159
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00605 362 MobiDBLite consensus disorder prediction 203 298 - -
Cma06g00605 362 MobiDBLite consensus disorder prediction 281 298 - -
Cma06g00605 362 MobiDBLite consensus disorder prediction 11 30 - -
Cma06g00605 362 ProSiteProfiles BRX domain profile. 307 362 IPR013591 -
Cma06g00605 362 Pfam Transcription factor BRX N-terminal domain 23 56 IPR027988 -
Cma06g00605 362 Pfam Transcription factor regulating root and shoot growth via Pin3 306 361 IPR013591 -
Cma06g00605 362 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Cma06g00605 362 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 362 IPR044532 -
Cma06g00605 362 MobiDBLite consensus disorder prediction 209 223 - -
Cma06g00605 362 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
Cma06g00605 362 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 362 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cma06g00605 Cma16g01211 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00605 Cma-Chr6:2928656 Cma08g00789 Cma-Chr8:4760442 5.16E-111 dispersed
Cma16g01211 Cma-Chr16:9181602 Cma06g00605 Cma-Chr6:2928656 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00605 - - mcha:111014865 701.049