Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00659 ATGCAAGAAGCTTCAAGAAAGAAAGTTTCAGATCAATCTCACAGGTTCTATGAACAGCCACAGCAAGAACTTGGATCCTATTACTGGCCTCCTATCAACCAAAATCACTTACCATCTGAGGCTTTCAACCCATATTGCAACCTTGAGTCGTCCTTGGGAACTAGCAGTTACCCACCTCAAAATTCTTCTTCTACTGTTAGCTTAACATCTAATGGAAGCCCTTCACACCAAGAGTGCCATTCATACCCGTTAGAACCGTATTATTCTCCCGACAACAACCGTGGCTCGCCTGTCAGTAAATCTTGCTTAACAGATGATGCTGATGATGACTTGAGGCACAAGATCAGGGAATTGGAGATTGCAATCCTTGGACCTGATTCAGAGATGTTTGATATCTATTCTGTCTCTAATCCAGTCAATCTTGTGTTATCTGAGCAAGAAGCAGGGTGGAAAGATGTGGCTGAGATAATCTCTAGAAGGGATTTGAAAGAGATGCTTTGTGCTTGTGCTCGAGCAATAGGAGAAAATGATATGTTGGCTGGAGAATGGTTGATATCTGAGTTACGTGGAATGGTCTCGGTTTCGGGTGCACCAATCCAACGTTTAGGAGCTTACTTGTTAGAGGCACTTGTTGCAAGGACAGCTTCTTCAGGTAGTACTATCTACAAAGCACTAAGATGTAAAGAGCCTATAGGCTCTGAATTGCTCTCATACATGAACATTCTCTATGAAGTTTGCCCTTATTTCAAGTTCGGGTACCTATCAGCAAATGGGGCAATTGCTGAAGCCATAAAAGGTGAAAATAGAGTTCACATAATTGATTTCCAGATAGGCCAGGGAAATCAGTGGATGACATTGATGCAAGCTCTTGCAAATCGGCCGGGAGGGCCCCCAAAGATTACTATCACAGGGATAGATGATTCTACTTCAGCATTTTCTCGAGGAGGGGACGTTGAGATTGTAGCGAAAAGGTTGTCGAATTTGGCAGAGTCATTGATGGTACCCTTTGAGTTCCATGGAATTGCAGGCTCTGCTTCCGAAATTCAACTAGAAGATCTAAAAGTTCAACCAGGTGAGGCCATTGCTGTGAATTTTGCCTTGGTGCTACACCATATGACAGATGAAAGTGTCGACAGTCCGAATCATCGGGATCGAATCCTGCGACTCGTCAAGAGCTTGTCTCCAAAAGTTGTGACCGTTGTCGAGCAAGAGTCGAACAACAATACAGCTCCCTTTTTCCCCCGTTTTCTCCAAACATTGAACTATTATACTGCCATTTTCGAGTCCATAGATATGACTCTTCCAAGAGAGCACAAGCAGCGGATCAATGTCGAGCAGCACTGTTTAGCTCGGGACATCGTTAATATAGTAGCATGTGAGGGAGCCGAAAGAGTCGAACGTCATGAACTTCTTGGAAAGTGGAGATCACGGTTCCTCATGGCAGGGTTTGAGCCACACCCTTTAAGCCCTTTTGTCAACGCTACAATTGAAGCACTGCTAAAGAACTACTGTGACAAGTACACGCTTGAAGAAAGGGATGGAGCCCTATATCTTGGCTGGTTGAATCAAAATCTGGTTACCTCTAGTGCTTGGATATGA 1599 44.09 MQEASRKKVSDQSHRFYEQPQQELGSYYWPPINQNHLPSEAFNPYCNLESSLGTSSYPPQNSSSTVSLTSNGSPSHQECHSYPLEPYYSPDNNRGSPVSKSCLTDDADDDLRHKIRELEIAILGPDSEMFDIYSVSNPVNLVLSEQEAGWKDVAEIISRRDLKEMLCACARAIGENDMLAGEWLISELRGMVSVSGAPIQRLGAYLLEALVARTASSGSTIYKALRCKEPIGSELLSYMNILYEVCPYFKFGYLSANGAIAEAIKGENRVHIIDFQIGQGNQWMTLMQALANRPGGPPKITITGIDDSTSAFSRGGDVEIVAKRLSNLAESLMVPFEFHGIAGSASEIQLEDLKVQPGEAIAVNFALVLHHMTDESVDSPNHRDRILRLVKSLSPKVVTVVEQESNNNTAPFFPRFLQTLNYYTAIFESIDMTLPREHKQRINVEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFEPHPLSPFVNATIEALLKNYCDKYTLEERDGALYLGWLNQNLVTSSAWI 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3268699 3270297 - CmaCh06G006590.1 Cma06g00659 296213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00659 532 MobiDBLite consensus disorder prediction 53 101 - -
Cma06g00659 532 ProSiteProfiles GRAS family profile. 153 532 IPR005202 -
Cma06g00659 532 MobiDBLite consensus disorder prediction 53 78 - -
Cma06g00659 532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 531 IPR005202 -
Cma06g00659 532 PANTHER GIBBERELLIN-RESPONSIVE PROTEIN, PUTATIVE-RELATED 32 531 - -
Cma06g00659 532 Pfam GRAS domain family 163 531 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00659 Cma16g01087 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00659 Cma-Chr6:3268699 Cma20g00670 Cma-Chr20:3070596 0 dispersed
Cma16g00944 Cma-Chr16:7274694 Cma06g00659 Cma-Chr6:3268699 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
35195 PF03514 GRAS 8.30E-131 CL0063 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00659 - - csv:101220072 893.649