Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00692 ATGGAGGAATATAATAAGATTTCTCCATTGCTTTTGTTTTTCTTTATGCTCCACACAGCGGCTGTTCCTACCAAGAACTCCTACATTGTCTATTTGGGATCACACTCCTTCGCCCCAAATCCAAGTGTATACGACGTCCAACTTGCAACCGAGTCTCAGTATGATATATTAGGATCCGTCAAGGGAAGCAAAGTGGCAGCCAAGGACTCTATTCTCTACTCCTACAATCGATACATTAATGGCTTTGCTGCCGTTCTTGATGAACAAGAAGCCACGGCTCTTGCGAAGAATCCAAGCGTGGTGTCCGTTTTTGAGAACAAGGAAAGAAAACTGCATACAACACGGTCATGGGGTTTTCTGGGGGTCGATAGTGATCGAGGAATCCCTCAGAACTCCATTTGGAAGGCGGCTCGGTTTGGGGCAGATACCATCATAGGAAACCTCGACACGGGTGTCTGGCCGGAGTCCCCCAGCTTCAATGATGCAGGGTATGGCCCTGTTCCTTCAAGGTGGAGGGGAGCTTGTGAAGGCGGCTCCAAATTTCGATGCAACAGGAAGTTGATTGGAGCACGCTATTTCTACCGAGGATTTCAAGCCGCCGAAGGTCCATTGACAACGCACAACATCAGCTTCGACAGTGCACGAGACCACGAAGGCCATGGATCGCACACTTTGTCCACTGCGGGCGGCAACTTTGTCCATGGAGTCAATGTGTTTGGCAATGGAAATGGGACTGCGAAAGGAGGTTCCCCCAGGGCTCGTGTTGTTGCCTACAAGGTCTGCTGGCCTTCAAAAAATGGCGGCTGTTACGATTCCGATATCTTAGCAGGCATCGAGGCCGCCATCAGCGACGGTGTGGATGTTCTTTCGGCCTCTATTGGCACGCTAGCTCAAGAGTTTGCTAATGACGCTATTTCGATAGGGGCGTTCCATGCGGTTCAGCACGGAATCGTCGTGGTTTGCTCGGCCGGGAATGACGGCCCGTCTCCCGGGAGTGTGAGCAATGTGTCTCCTTGGATGGTCACTGTTGGAGCAAGTACCATCGACCGTGACTTTGTCAGTTATGTGGTCCTGGGGAACAAGAAGCGATTTAGGGGTTCAAGCCTTTCATCCAGTCGATTGCCCGCTGGTAAGTTCTACCCTTTGATAAAGGCTGTGCAAGTGAAAGCTGCCAATGCCACTGATGGGTTTGCCCAACTTTGCATGGATGGAACACTCGATCCCACAAAGGCAAAAGGCAAGATTATAGTTTGCCTTCGAGGAGAAAATGCAAGAGTGAGCAAGGGGTTCGAGGTTTTTCGTGTCGGTGGTGTCGGGATGGTTCTGGTAAATAACCAGATGGACGGTTCAGCTCTTGTAGCTGATCCACACATACTTCCTGCTTCTCATCTAAGCTATGCGGATGGAGTTTCCATCGCTCAATATTTGAGCTCCACCAAAACACCCGTGGCTTCCATAACCCATGCAAGCACAGAGATGGGAATTAAACCATCGCCTCTCATGGCTTCATTTTCCTCAAGAGGCCCTGATTTCATCACACAGGCTGTAATCAAGCCTGATATAACAGCACCGGGTGTAAATATAATCGCATCTGTCACCGACGATATATCAGCATCAGGCTTGCCACTTGATAAACGTCGAGTGCCTTTTAACATCGAGTCTGGCACTTCCATGTCATGCCCACACATCTCAGGTGTTGCAGGCCTTCTAAAGACTCTGCATCCCACGTGGAGTCCTGCAGCTATCAAATCCGCCGTCATGACTACAGCCAAAACTAGAGACAACACCAAGAACACATTATTGGACTACACCAAAGTGAAGGCTACCCCATTTGATTATGGTGCAGGACACGTCCATCCAAACGATGCCATGGACCCCGGCCTCGTTTACGACACAACGGTTGATGACTATTTGAACTTCTTATGTACACGGGGCTACAACTCCCGCACACTCAAGAAATTCTCTAACAAGCCGTTTGTTTGCGCCAACAACTTTGCAACCACAGACTTCAACTATCCATCCATCTTGGTCCCCAGGTTGCAAATTGGTGGATCGGTGACGGTCAATAGAAGAGTCAAGAATGTGGGAAGCACAGGCACGTATGTGGCGCGGGTGAGGATGCCCAAGGGTATTACAGTTATGGTTGAGCCAAGTAAGTTACAATTTCACAGCGTTGGAGAAGAGAGGCCTTTCAAACTTATATTTCATTATGCACATAAACTGCGACGTCAAGGCGGCTATGTTTTTGGGGCATTGGTATGGTCAGATGGGAAACATTTTGTTAGAAGTTCTATTGCCGTGAATTTGTCTATTTTGGAGAAGTTTCTACGAATTGTAGTTTCAAGGAACAGGAAGCAAGTCGACGATCCTAATGGAATCGATTTGGACATTGACAAGAAATTCCTTGGCCTGCCTATCAAGTCAGCCGTCGATAAGTTTCAACTTCTTCCTGAATTTTTGAAGGTGGAAATCATCACACTGCTTTTCCATGAAATTATCTCTATCACGCTGCTTTTGTCTAAATTTCAGCCTATGATTATTAACGCACATAGTTTAATCATCTGGTTTCAAGTCTGGTTCGACAACGCTCGAGATTTCTTTAACTACTTCGTGAATACAGAAATTAAAAAGATAGTCAAGGCCAATGATCGAATTGAATCCTGCAATGATCGTACTTATCTTAGGGTTAGTCGCTTTTGTGCTCCTGTTCTCCTATTACAAGGTGCCAGCCACTCTAGTCGAATGACAGTGGGAAAAATGGTTGAACTCCTAGGAGGAAAAGCAGGGGCTTCATGTGGTAGGTTTCACTATGGTAGTGCATTTGGAGAGCCAAGTGGTGATGCAGACGAAGTTGCTGCTTATAAGATTCCTGGTGAACCAGATGGCTATAACGGGACAAAGTCTCTATTCTTTGTCAAACAACGGAAGCCAGCCGACCGAGAGCAGGCTTCGAATGGAAAATCCCCAGAAAAGTTGAAAGGAGCTGGCTCGTTTTTTATGAAAGTGTTTGGGGTTCTCGCAGAATGTGCGAAGGAAAAAGCATATACACAAGAACAAGCATTAGAGTATCTTGAGACAAAATTAGATAACAATTCTTCTAGATGA 3105 46.96 MEEYNKISPLLLFFFMLHTAAVPTKNSYIVYLGSHSFAPNPSVYDVQLATESQYDILGSVKGSKVAAKDSILYSYNRYINGFAAVLDEQEATALAKNPSVVSVFENKERKLHTTRSWGFLGVDSDRGIPQNSIWKAARFGADTIIGNLDTGVWPESPSFNDAGYGPVPSRWRGACEGGSKFRCNRKLIGARYFYRGFQAAEGPLTTHNISFDSARDHEGHGSHTLSTAGGNFVHGVNVFGNGNGTAKGGSPRARVVAYKVCWPSKNGGCYDSDILAGIEAAISDGVDVLSASIGTLAQEFANDAISIGAFHAVQHGIVVVCSAGNDGPSPGSVSNVSPWMVTVGASTIDRDFVSYVVLGNKKRFRGSSLSSSRLPAGKFYPLIKAVQVKAANATDGFAQLCMDGTLDPTKAKGKIIVCLRGENARVSKGFEVFRVGGVGMVLVNNQMDGSALVADPHILPASHLSYADGVSIAQYLSSTKTPVASITHASTEMGIKPSPLMASFSSRGPDFITQAVIKPDITAPGVNIIASVTDDISASGLPLDKRRVPFNIESGTSMSCPHISGVAGLLKTLHPTWSPAAIKSAVMTTAKTRDNTKNTLLDYTKVKATPFDYGAGHVHPNDAMDPGLVYDTTVDDYLNFLCTRGYNSRTLKKFSNKPFVCANNFATTDFNYPSILVPRLQIGGSVTVNRRVKNVGSTGTYVARVRMPKGITVMVEPSKLQFHSVGEERPFKLIFHYAHKLRRQGGYVFGALVWSDGKHFVRSSIAVNLSILEKFLRIVVSRNRKQVDDPNGIDLDIDKKFLGLPIKSAVDKFQLLPEFLKVEIITLLFHEIISITLLLSKFQPMIINAHSLIIWFQVWFDNARDFFNYFVNTEIKKIVKANDRIESCNDRTYLRVSRFCAPVLLLQGASHSSRMTVGKMVELLGGKAGASCGRFHYGSAFGEPSGDADEVAAYKIPGEPDGYNGTKSLFFVKQRKPADREQASNGKSPEKLKGAGSFFMKVFGVLAECAKEKAYTQEQALEYLETKLDNNSSR 1034
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3468860 3476951 + CmaCh06G006920.1 Cma06g00692 296246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00692 1034 Gene3D - 909 945 IPR037033 GO:0003677|GO:0003899|GO:0006351
Cma06g00692 1034 Gene3D Peptidase S8/S53 domain 142 637 IPR036852 GO:0004252|GO:0006508
Cma06g00692 1034 Gene3D - 349 493 - -
Cma06g00692 1034 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Cma06g00692 1034 CDD Peptidases_S8_3 110 590 IPR034197 -
Cma06g00692 1034 SUPERFAMILY Subtilisin-like 111 628 IPR036852 GO:0004252|GO:0006508
Cma06g00692 1034 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 26 770 - -
Cma06g00692 1034 Pfam Subtilase family 141 602 IPR000209 GO:0006508|GO:0008236
Cma06g00692 1034 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 770 IPR045051 -
Cma06g00692 1034 ProSiteProfiles Serine proteases, subtilase domain profile. 116 624 - -
Cma06g00692 1034 SUPERFAMILY Protease propeptides/inhibitors 26 109 - -
Cma06g00692 1034 Gene3D - 641 770 - -
Cma06g00692 1034 Pfam PA domain 392 471 IPR003137 -
Cma06g00692 1034 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Cma06g00692 1034 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Cma06g00692 1034 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cma06g00692 1034 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Cma06g00692 1034 CDD PA_subtilisin_like 355 486 - -
Cma06g00692 1034 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 112 IPR037045 -
Cma06g00692 1034 Pfam Fibronectin type-III domain 669 767 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00692 Cma-Chr6:3468860 Cma06g00694 Cma-Chr6:3494530 0 dispersed
Cma16g00599 Cma-Chr16:3092759 Cma06g00692 Cma-Chr6:3468860 9.12E-157 dispersed
Cma18g00823 Cma-Chr18:7180081 Cma06g00692 Cma-Chr6:3468860 9.12E-16 dispersed
Cma06g00691 Cma-Chr6:3464091 Cma06g00692 Cma-Chr6:3468860 0 tandem
Cma06g00692 Cma-Chr6:3468860 Cma06g00693 Cma-Chr6:3478009 0 tandem
Cma07g00149 Cma-Chr7:768706 Cma06g00692 Cma-Chr6:3468860 0 transposed
Cma09g00091 Cma-Chr9:398986 Cma06g00692 Cma-Chr6:3468860 0 transposed
Cma12g01293 Cma-Chr12:10011247 Cma06g00692 Cma-Chr6:3468860 2.90E-09 transposed
Cma19g00834 Cma-Chr19:7898174 Cma06g00692 Cma-Chr6:3468860 0 transposed
Cma16g00979 Cma-Chr16:7548381 Cma06g00692 Cma-Chr6:3468860 1.40E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00692 - - cmax:111498820 1505.35