Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00693 ATGGAGGAATATAATAAGATTTCTCCATTGCTTTTGTTTTTCTTTATGCTCCACACAGCGGCTGTTCCTACCAAGAACTCCTACATTGTCTATTTGGGATCACACTCCTTCGCCCCAAATCCAAGTGTATACGACGTCCAACTTGCAACCGAGTCTCAGTATGATATATTAGGATCCGTCAAGGGAAGCAAAGTGGCAGCCAAGGACTCTATTCTCTACTCCTACAATCGATACATTAATGGCTTTGCTGCCGTTCTTGATGAACAAGAAGCCACGGCTCTTGCGAAGAATCCAAGCGTGGTGTCCGTTTTTGAGAACAAGGAAAGAAAACTGCATACAACACGGTCATGGGGTTTTCTGGGGGTCGATAGTGATCGAGGAATCCCTCAGAACTCCATTTGGAAGGCGGCTCGGTTTGGGGCAGATACCATCATAGGAAACCTCGACACGGGTGTCTGGCCGGAGTCCCCCAGCTTCAATGATGCAGGGTATGGCCCTGTTCCTTCAAGGTGGAGGGGAGCTTGCGAAGGCGGCTCCAAATTTCGATGCAACAGGAAGTTGATTGGAGCACGCTATTTCTACCGAGGATTTCAAGCCGCCGAAGGTCCATTGACAACGCACAACATCAGCTTCGACAGTGCACGAGACCATGAAGGCCATGGATCGCACACTTTGTCCACTGCGGGCGGCAACTTTGTCCATGGAGTCAATGTGTTTGGCAATGGAAATGGGACTGCGAAAGGAGGTTCCCCCAGGGCTCGTGTTGTTGCCTACAAGGTCTGCTGGCCTTCAAAAAATGGCGGCTGTTACGATTCCGATATCTTAGCAGGCATCGAGGCCGCCATCAGCGACGGTGTGGATGTTCTTTCGGCCTCTATTGGCACGCTAGCTCAAGAGTTTGCTAATGACGCTATTTCGATAGGGGCGTTCCATGCGGTTCAGCACGGAATCGTCGTGGTTTGCTCGGCCGGGAATGACGGCCCGTCTCCCGGGAGTGTGAGCAATGTGTCTCCTTGGATGGTCACTGTTGGAGCAAGTACCATCGACCGTGACTTTGTCAGTTATGTGGTCCTGGGGAACAAGAAGCGATTTAGGGGTTCAAGCCTTTCATCCAGTCGATTGCCCGCTGGTAAGTTCTACCCTTTGATAAAGGCTGTGCAAGTGAAAGCTGCCAATGCCACTGATGGGTTTGCCCAACTTTGCATGGATGGAACACTCGATCCCACAAAGGCAAAAGGCAAGATTATAGTTTGCCTTCGAGGAGAAAATGCAAGAGTGAGCAAGGGGTTCGAGGTTTTTCGTGTCGGTGGTGTCGGGATGGTTCTGGTAAATAACCAGATGGACGGTTCAGCTCTTGTAGCTGATCCACACATACTTCCTGCTTCTCATCTAAGCTATGCGGATGGAGTTTCCATCGCTCAATATTTGAGCTCCACCAAAACACCCGTGGCTTCCATAACCCATGCAAGCACAGAGATGGGAATTAAACCATCGCCTCTCATGGCTTCATTTTCCTCAAGAGGCCCTGATTTCATCACACAGGCTGTAATCAAGCCTGATATAACAGCACCGGGTGTAAATATAATCGCATCTGTCACCGACGATATATCAGCATCAGGCTTGCCACTTGATAAACGTCGAGTGCCTTTTAACATCGAGTCTGGCACTTCCATGTCATGCCCACACATCTCTGGTGTTGCAGGCCTTCTAAAGACTCTGCATCCCACGTGGAGTCCTGCAGCTATCAAATCCGCCGTCATGACTACAGCCAAAACTAGAGACAACACCAAGAACACATTATTGGACTACACCAAAGTGAAGGCTACCCCATTTGATTATGGTGCAGGACACGTCCATCCAAACGATGCCATGGACCCCGGCCTCGTTTACGACACAACGGTTGATGACTATTTGAACTTCTTATGTACACGGGGCTACAACTCCCGCACACTCAAGAAATTCTCTAACAAGCCGTTTGTTTGCGCCAACAACTTTGCAACCACAGACTTCAACTATCCATCCATCTTGGTCCCCAGGTTGCAAATTGGTGGATCGGTGACGGTCAATAGAAGAGTCAAGAATGTGGGAAGCACAGGCACGTATGTGGCGCGGGTGAGGATGCCCAAGGGTATTACAGTTATGGTTGAGCCAACAAAAGCAATGGAGGAATATAATAAGATTTCTCCATTGCTTTTGTTTTTCTTTATGCTCCACACAGCGGCTGTTCCTACCAAGAACTCCTACATTGTCTATTTGGGATCACACTCCTTCGCCCCAAATCCAAGTGTATACGACGTCCAACTTGCAACCGAGTCTCAGTATGATATATTAGGATCCGTCAAGGGAAGCAAAGTGGCAGCCAAGGACTCTATTCTCTACTCCTACAATCGATACATTAATGGCTTTGCTGCCGTTCTTGATGAACAAGAAGCCACGGCTCTTGCGAAGAATCCAAGCGTGGTGTCCGTTTTTGAGAACAAGGAAAGAAAACTGCATACAACACGGTCATGGGGTTTTCTGGGGGTCGATAGTGATCGAGGAATCCCTCAGAACTCCATTTGGAAGGCGGCTCGGTTTGGGGCAGATACCATCATAGGAAACCTCGACACGGGTGTCTGGCCGGAGTCCCCCAGCTTCAATGATGCAGGGTATGGCCCTGTTCCTTCAAGGTGGAGGGGAGCTTGCGAAGGCGGCTCCAAATTTCGATGCAACAGGAAGTTGATTGGAGCACGCTATTTCTACCGAGGATTTCAAGCCGCCGAAGGTCCATTGACAACGCACAACATCAGCTTCGACAGTGCACGAGACCATGAAGGCCATGGATCGCACACTTTGTCCACTGCGGGCGGCAACTTTGTCCATGGAGTCAATGTGTTTGGCAATGGAAATGGGACTGCGAAAGGAGGTTCCCCCAGGGCTCGTGTTGTTGCCTACAAGGTCTGCTGGCCTTCAAAAAATGGCGGCTGTTACGATTCCGATATCTTAGCAGGCATCGAGGCCGCCATCAGCGACGGTGTGGATGTTCTTTCGGCCTCTATTGGCACGCTAGCTCAAGAGTTTGCTAATGACGCTATTTCGATAGGGGCGTTCCATGCGGTTCAGCACGGAATCGTCGTGGTTTGCTCGGCCGGGAATGACGGCCCGTCTCCCGGGAGTGTGAGCAATGTGTCTCCTTGGATGGTCACTGTTGGAGCAAGTACCATCGACCGTGACTTTGTCAGTTATGTGGTCCTGGGGAACAAGAAGCGATTTAGGGGTTCAAGCCTTTCATCCAGTCGATTGCCCGCTGGTAAGTTCTACCCTTTGATAAAGGCTGTGCAAGTGAAAGCTGCCAATGCCACTGATGGGTTTGCCCAACTTTGCATGGATGGAACACTCGATCCCACAAAGGCAAAAGGCAAGATTATAGTTTGCCTTCGAGGAGAAAATGCAAGAGTGAGCAAGGGGTTCGAGGTTTTTCGTGTCGGTGGTGTCGGGATGGTTCTGGTAAATAACCAGATGGACGGTTCAGCTCTTGTAGCTGATCCACACATACTTCCTGCTTCTCATCTAAGCTATGCGGATGGAGTTTCCATCGCTCAATATTTGAGCTCCACCAAAACACCCGTGGCTTCCATAACCCATGCAAGCACAGAGATGGGAATTAAACCATCGCCTCTCATGGCTTCATTTTCCTCAAGAGGCCCTGATTTCATCACACAGGCTGTAATCAAGCCTGATATAACAGCACCGGGTGTAAATATAATCGCATCTGTCACCGACGATATATCAGCATCAGGCTTGCCACTTGATAAACGTCGAGTGCCTTTTAACATCGAGTCTGGCACTTCCATGTCATGCCCACACATCTCTGGTGTTGCAGGCCTTCTAAAGACTCTGCATCCCACGTGGAGTCCTGCAGCTATCAAATCCGCCGTCATGACTACAGCCAAAACTAGAGACAACACCAAGAACACATTATTGGACTACACCAAAGTGAAGGCTACCCCATTTGATTATGGTGCAGGACACGTCCATCCAAACGATGCCATGGACCCCGGCCTCGTTTACGACACAACGGTTGATGACTATTTGAACTTCTTATGTACACGGGGCTACAACTCCCGCACACTCAAGAAATTCTCTAACAAGCCGTTTGTTTGCGCCAACAACTTTGCAACCACAGACTTCAACTATCCATCCATCTTGGTCCCCAGGTTGCAAATTGGTGGATCGGTGACGGTCAATAGAAGAGTCAAGAATGTGGGAAGCACAGGCACGTATGTGGCGCGGGTGAGGATGCCCAAGGGTATTACAGTTATGGTTGAGCCAAGTAAGTTACAATTTCACAGCGTTGGAGAAGAGAGGCCTTTCAAACTTATATTTCATTATGCACATAAACTGCGACGTCAAGGCTATGTTTTTGGGGCATTGGTATGGTCAGATGGGAAACATTTTGTTAGAAGTTCTATTGCCGTGAATTTGGTTTGA 4470 49.26 MEEYNKISPLLLFFFMLHTAAVPTKNSYIVYLGSHSFAPNPSVYDVQLATESQYDILGSVKGSKVAAKDSILYSYNRYINGFAAVLDEQEATALAKNPSVVSVFENKERKLHTTRSWGFLGVDSDRGIPQNSIWKAARFGADTIIGNLDTGVWPESPSFNDAGYGPVPSRWRGACEGGSKFRCNRKLIGARYFYRGFQAAEGPLTTHNISFDSARDHEGHGSHTLSTAGGNFVHGVNVFGNGNGTAKGGSPRARVVAYKVCWPSKNGGCYDSDILAGIEAAISDGVDVLSASIGTLAQEFANDAISIGAFHAVQHGIVVVCSAGNDGPSPGSVSNVSPWMVTVGASTIDRDFVSYVVLGNKKRFRGSSLSSSRLPAGKFYPLIKAVQVKAANATDGFAQLCMDGTLDPTKAKGKIIVCLRGENARVSKGFEVFRVGGVGMVLVNNQMDGSALVADPHILPASHLSYADGVSIAQYLSSTKTPVASITHASTEMGIKPSPLMASFSSRGPDFITQAVIKPDITAPGVNIIASVTDDISASGLPLDKRRVPFNIESGTSMSCPHISGVAGLLKTLHPTWSPAAIKSAVMTTAKTRDNTKNTLLDYTKVKATPFDYGAGHVHPNDAMDPGLVYDTTVDDYLNFLCTRGYNSRTLKKFSNKPFVCANNFATTDFNYPSILVPRLQIGGSVTVNRRVKNVGSTGTYVARVRMPKGITVMVEPTKAMEEYNKISPLLLFFFMLHTAAVPTKNSYIVYLGSHSFAPNPSVYDVQLATESQYDILGSVKGSKVAAKDSILYSYNRYINGFAAVLDEQEATALAKNPSVVSVFENKERKLHTTRSWGFLGVDSDRGIPQNSIWKAARFGADTIIGNLDTGVWPESPSFNDAGYGPVPSRWRGACEGGSKFRCNRKLIGARYFYRGFQAAEGPLTTHNISFDSARDHEGHGSHTLSTAGGNFVHGVNVFGNGNGTAKGGSPRARVVAYKVCWPSKNGGCYDSDILAGIEAAISDGVDVLSASIGTLAQEFANDAISIGAFHAVQHGIVVVCSAGNDGPSPGSVSNVSPWMVTVGASTIDRDFVSYVVLGNKKRFRGSSLSSSRLPAGKFYPLIKAVQVKAANATDGFAQLCMDGTLDPTKAKGKIIVCLRGENARVSKGFEVFRVGGVGMVLVNNQMDGSALVADPHILPASHLSYADGVSIAQYLSSTKTPVASITHASTEMGIKPSPLMASFSSRGPDFITQAVIKPDITAPGVNIIASVTDDISASGLPLDKRRVPFNIESGTSMSCPHISGVAGLLKTLHPTWSPAAIKSAVMTTAKTRDNTKNTLLDYTKVKATPFDYGAGHVHPNDAMDPGLVYDTTVDDYLNFLCTRGYNSRTLKKFSNKPFVCANNFATTDFNYPSILVPRLQIGGSVTVNRRVKNVGSTGTYVARVRMPKGITVMVEPSKLQFHSVGEERPFKLIFHYAHKLRRQGYVFGALVWSDGKHFVRSSIAVNLV 1489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3478009 3489145 - CmaCh06G006930.1 Cma06g00693 296247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00693 1489 Gene3D - 1361 1489 - -
Cma06g00693 1489 Gene3D - 641 724 - -
Cma06g00693 1489 Pfam Fibronectin type-III domain 669 719 IPR041469 -
Cma06g00693 1489 Pfam Fibronectin type-III domain 1389 1486 IPR041469 -
Cma06g00693 1489 ProSiteProfiles Serine proteases, subtilase domain profile. 836 1344 - -
Cma06g00693 1489 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Cma06g00693 1489 CDD Peptidases_S8_3 830 1310 IPR034197 -
Cma06g00693 1489 CDD Peptidases_S8_3 110 590 IPR034197 -
Cma06g00693 1489 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 746 1488 - -
Cma06g00693 1489 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 26 719 - -
Cma06g00693 1489 Pfam PA domain 1112 1191 IPR003137 -
Cma06g00693 1489 Pfam PA domain 392 471 IPR003137 -
Cma06g00693 1489 ProSiteProfiles Serine proteases, subtilase domain profile. 116 624 - -
Cma06g00693 1489 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Cma06g00693 1489 Pfam Peptidase inhibitor I9 747 832 IPR010259 -
Cma06g00693 1489 SUPERFAMILY Subtilisin-like 111 628 IPR036852 GO:0004252|GO:0006508
Cma06g00693 1489 SUPERFAMILY Subtilisin-like 831 1348 IPR036852 GO:0004252|GO:0006508
Cma06g00693 1489 ProSitePatterns Serine proteases, subtilase family, serine active site. 1275 1285 IPR023828 -
Cma06g00693 1489 Pfam Subtilase family 141 602 IPR000209 GO:0006508|GO:0008236
Cma06g00693 1489 Gene3D Peptidase S8/S53 domain 142 637 IPR036852 GO:0004252|GO:0006508
Cma06g00693 1489 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cma06g00693 1489 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Cma06g00693 1489 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Cma06g00693 1489 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 746 1488 IPR045051 -
Cma06g00693 1489 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 719 IPR045051 -
Cma06g00693 1489 Gene3D - 349 493 - -
Cma06g00693 1489 Gene3D - 1069 1213 - -
Cma06g00693 1489 Pfam Subtilase family 861 1322 IPR000209 GO:0006508|GO:0008236
Cma06g00693 1489 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 737 832 IPR037045 -
Cma06g00693 1489 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 112 IPR037045 -
Cma06g00693 1489 Gene3D Peptidase S8/S53 domain 862 1357 IPR036852 GO:0004252|GO:0006508
Cma06g00693 1489 CDD PA_subtilisin_like 1075 1206 - -
Cma06g00693 1489 CDD PA_subtilisin_like 355 486 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00046 Cma-Chr4:233078 Cma06g00693 Cma-Chr6:3478009 4.42E-171 dispersed
Cma04g00183 Cma-Chr4:886209 Cma06g00693 Cma-Chr6:3478009 0 dispersed
Cma06g00688 Cma-Chr6:3437968 Cma06g00693 Cma-Chr6:3478009 0 dispersed
Cma06g00693 Cma-Chr6:3478009 Cma16g00976 Cma-Chr16:7523164 0 dispersed
Cma07g00149 Cma-Chr7:768706 Cma06g00693 Cma-Chr6:3478009 0 dispersed
Cma09g00091 Cma-Chr9:398986 Cma06g00693 Cma-Chr6:3478009 3.38E-171 dispersed
Cma16g01002 Cma-Chr16:7712432 Cma06g00693 Cma-Chr6:3478009 2.39E-14 dispersed
Cma06g00692 Cma-Chr6:3468860 Cma06g00693 Cma-Chr6:3478009 0 tandem
Cma06g00693 Cma-Chr6:3478009 Cma06g00694 Cma-Chr6:3494530 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00693 - - cmax:111498820 2526.9