Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00694 ATGGAGTTTTCTTATATTATTTCTCCATTGCTTTTGTTCTTCTTTTTGCTTCAAACATCATCTGTTCATACCAAAAAGTCTTACATTGTTTACTTGGGATCGGAATCGAACCCGAGTATATATGATGTTCAACTTGCGACCGAATCTAAATATGATATATTAGGAACTGTCAAGGGAAGCAAAGTGGCAGCTAAAGAATCGATTCTCTATACGTATAATAGATGTATTAATGGCTTTGCTGCTGTTCTTGATGATAAAGAAGTTACGGCTCTTGCAAAGAACCCGAGCGTGGTGTCGATTTTTGAAAATAGGGAAAGAAAATTGCATACAACACGATCATGGAGTTTTCTGGGGGTTGGTAGTGATCGAGGAATTCCTTGGAACTCCATTTGGAAGGCTTCTAAGTTTGGGGAAGATGTAATTATCGGGAACCTCGACACGGAGTCCCACAGCTTCCACGATTCTGGCTATGGCCCGGTTCCTTCAAGGTGGATGGGAGCTTGTGAAGGCGGTTCTAACTTTAGTTGCAACAGGAAGTTGATCGGAGCAAGATATTTCTACCGAGGATATGAAATGATCAATGGTCCTCTCAACATTAGCTCACTAAACGCACGAGACCATGAAGGCCATGGTACACACACATTGTCCACTGCCGGTGGTAACTTTGTACGAGGAGCCAACGTGTTTGGCAATGGCAATGGGACAGCAAAAGGAGGCGCCCCCAAAGCTCGTGTTGCTGCCTACAAGGTATGCTGGCCTCAAGGCAAGTGTTCTGATGCCGATCTCTTAGCTGGTATCGAAGCCGCTATCAGCGACGGTGTCGACGTTCTCTCGATCTCTCTCGGTGCAGCAGCTCAGGACTTTGCTGATGACCCAATTTCAGTAGGGGCATTCCATGCCATTCAACAAGGAATCATTGTAGTTTGCTCTGCCGGAAATGATGGCCCGCTCCCTGGGACTGTCACCAATGTATCTCCATGGATGTTCACTGTTGGAGCTAGTTCCATCGACCGAGGCTTCTTCAGTTACGTGTATCTCGGAAACAAGAAGCAGGTAAAGGGTTCGAGTCTTTCATCCGGAGGATTGCCACGTGGTAAATTGTACCCTTTGATGAATTCTGTGAATGCAAAAGCTTCCAATGCCTCAGATGGACTTGCCCAACTTTGCGAGGAGGGATCACTTGATCCCATGAAGGCAAGAGGGAAGATTATAGTATGTCTTCGAGGAGACAACGGAAGAATGGACAAGAGTTTCGAGGTTCTTCGTGTCGGTGGTGTCGGTATGATTCTGGTTAACGACAAGATCAGTGGTTCGGACATTGAAACTGATGCACACATGCTTCCTACTTCACATGTAAGCTATATTGATGGCCTCTCCATCGCTGAATATTTGAAATCCACCAAAAGGCCTGTGGCTTCCATAACTCCGGTAAGGACAGAGATAGGGATTAAACCATCGCCTGTCATGGCTCCATTCTCGTCAAGAGGCCCTAATCACATAGCAGAGGCCATGATCAAGCCTGATATATCAGCACCGGGTGTGAATATAATCGCATCTTTCACGAAAGCGGTAGCAGCAACAGACTTGCCATTTGACAAACGTCGAGTGCCTTTCAACGTTCAATCCGGCACATCCATGTCATGCCCGCACATCGCAGGCGTTGCAGGCCTTCTTAAGAAACTTCATCCTACATGGAGTCCTGCAGCTATCAAATCTGCTATTATGACTACAGCCAAAACGAGAGACAACACCAAGAACACAATGTTGGACTTCAACAAAGTGAAGGCTACCCCATTTGATTATGGAGCAGGACATGTCCATCCAAACGATGCCATGGACCCCGGCCTCGTTTACGACACGACGATTGATGACTACTTGAACTTCTTATGTATGCAGGGCTATAACTCACTCACGCTCAAGAAATTCTCTAATAAGCCATTTGTTTGTGCCAAGAACTTCGCAAGCACCGACCTCAACTATCCATCCATCTCGGTCCCCAAGTTGCAAATTGGTGTACCGGTGACGGTGAATAGAAGAGTTAAGAATGTGGGAAGCGCAGGCACGTATGTGGCGCGGGTGAGGATGCCCAAGGGCATTACAGTTATGGTGGAGCCAAGTACGTTGCAATTTCACAGCGTAGGAGAAGAGAAGGCTTTCAAACTTGTATTTCATTACGCACAGAAAGTGCGGCGTCCTGGCTATGTTTTTGGGGCATTGGTATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTATTGCAGTGAATTTGGTATGA 2274 46.31 MEFSYIISPLLLFFFLLQTSSVHTKKSYIVYLGSESNPSIYDVQLATESKYDILGTVKGSKVAAKESILYTYNRCINGFAAVLDDKEVTALAKNPSVVSIFENRERKLHTTRSWSFLGVGSDRGIPWNSIWKASKFGEDVIIGNLDTESHSFHDSGYGPVPSRWMGACEGGSNFSCNRKLIGARYFYRGYEMINGPLNISSLNARDHEGHGTHTLSTAGGNFVRGANVFGNGNGTAKGGAPKARVAAYKVCWPQGKCSDADLLAGIEAAISDGVDVLSISLGAAAQDFADDPISVGAFHAIQQGIIVVCSAGNDGPLPGTVTNVSPWMFTVGASSIDRGFFSYVYLGNKKQVKGSSLSSGGLPRGKLYPLMNSVNAKASNASDGLAQLCEEGSLDPMKARGKIIVCLRGDNGRMDKSFEVLRVGGVGMILVNDKISGSDIETDAHMLPTSHVSYIDGLSIAEYLKSTKRPVASITPVRTEIGIKPSPVMAPFSSRGPNHIAEAMIKPDISAPGVNIIASFTKAVAATDLPFDKRRVPFNVQSGTSMSCPHIAGVAGLLKKLHPTWSPAAIKSAIMTTAKTRDNTKNTMLDFNKVKATPFDYGAGHVHPNDAMDPGLVYDTTIDDYLNFLCMQGYNSLTLKKFSNKPFVCAKNFASTDLNYPSISVPKLQIGVPVTVNRRVKNVGSAGTYVARVRMPKGITVMVEPSTLQFHSVGEEKAFKLVFHYAQKVRRPGYVFGALVWSDGKHFVRSPIAVNLV 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3494530 3498485 - CmaCh06G006940.1 Cma06g00694 296248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00694 757 Gene3D Peptidase S8/S53 domain 139 625 IPR036852 GO:0004252|GO:0006508
Cma06g00694 757 Pfam Fibronectin type-III domain 657 754 IPR041469 -
Cma06g00694 757 Gene3D - 629 757 - -
Cma06g00694 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 109 IPR037045 -
Cma06g00694 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Cma06g00694 757 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 27 756 - -
Cma06g00694 757 CDD Peptidases_S8_3 107 578 IPR034197 -
Cma06g00694 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 756 IPR045051 -
Cma06g00694 757 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Cma06g00694 757 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Cma06g00694 757 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Cma06g00694 757 Gene3D - 337 481 - -
Cma06g00694 757 Pfam Subtilase family 139 585 IPR000209 GO:0006508|GO:0008236
Cma06g00694 757 Pfam Peptidase inhibitor I9 27 109 IPR010259 -
Cma06g00694 757 SUPERFAMILY Protease propeptides/inhibitors 26 106 - -
Cma06g00694 757 SUPERFAMILY Subtilisin-like 108 616 IPR036852 GO:0004252|GO:0006508
Cma06g00694 757 ProSiteProfiles Serine proteases, subtilase domain profile. 113 612 - -
Cma06g00694 757 Pfam PA domain 389 459 IPR003137 -
Cma06g00694 757 CDD PA_subtilisin_like 343 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00691 Cma-Chr6:3464091 Cma06g00694 Cma-Chr6:3494530 0 dispersed
Cma06g00692 Cma-Chr6:3468860 Cma06g00694 Cma-Chr6:3494530 0 dispersed
Cma06g00694 Cma-Chr6:3494530 Cma16g00976 Cma-Chr16:7523164 0 dispersed
Cma06g00693 Cma-Chr6:3478009 Cma06g00694 Cma-Chr6:3494530 0 tandem
Cma10g00622 Cma-Chr10:2862927 Cma06g00694 Cma-Chr6:3494530 2.58E-07 transposed
Cma16g00987 Cma-Chr16:7597941 Cma06g00694 Cma-Chr6:3494530 1.42E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00694 - - cmax:111498820 1488.01