Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g00726 ATGTTGCTTAGCTTCCTGAAATCGCCCATTTTTGAAGTTCCAGTCAATATACTATGTTCTTTATTTAAAGGATCAGCCGATCCACACGGCCATTTGCTAATTCTGAGGCAAGTAGTCAACAATATTCATCTTCAACGCAAACCCAGATTCAGTTTTATTTTGCTTTTGAGCTATCTATCTACTGTTTCTTCTCTGTTAATGGCTGGTCGGATTTTTGAAACTTTGTCATTTGGGTCACAACATGGTCAAAGTAATCAATCTTTGCCATTTTCATCTGGAAATGCATCATTGAAGTTCTTGCTCTTGCATGGTTATTTGGATATTTCTGTCAAGTCAGCCAAGAATCTTCCTAACATGGATATGTTTCATAAGACTCTTGGGGATGTTCTTTCAAAAGTGTCTTTTAAGAGTTCTAAGAACAGTGATGGGCAAAAGGCTCCAAAAGTGACTAGTGATCCTTATGTGACTATCTCTGTATCTGGTGCTGTGATAGGAAGAACTTTTGTGATTGATAATAGTGAAAATCCTGTTTGGATGCAGCATTTTAATGTTCCTGTAGCTCATTATGGTGCTGAAGTGCACTTTGTAGTTAAAGATCATGATGTTGTGGGATCACAAATTATAGGTGTTGTTGCTATTCCTATTGAACAATTATACTCTGGAGATGTAGTTGAGGGTACCTACCCTATCCTTAATAGTAGCAGGAAGCCCTGCAAGCCTGGGGCTGTCTTGAGTTTGTCGATTCGGTATATTCCGGCAGACCGGGCGGCCATTTTTCACGGTGGAATGTATGCATCTTCTGATCATCAGGGAGTTCCTGGCACATATTTTCCTCTTAGGAAGGGAGGTAAAGTTACATTGTACCAAGATGCTCATGTTGAGGATGGATGTCTTCCTTCAGATTTTAAGCTTCATGGTGGGGTTGAATATGAACATAGGAGCTGTTGGGACGACATCACTGAATCGATTAGCAAAGCTCGTCGTTTGATCTATATTACGGGCTGGTCTGTATACCATAATGTTAGATTGGTTAGAGATGGAAAGGCGAAAGAATGCAGTTTAGGGGACTTACTCAAAGCTAAGTCTCAAGAAGGTGTACGAGTGTTGCTTCTTATATGGGATGATCCAACTTCGACAAGTATGTTGGGATATAAAACGGTTGGGATGATGAATACAAATGATGAGGAGACTCGGCGGTTCTTTAAGAACTCTTCAGTCCAAGTGGTATTGTGCCCACGATCTGGTGGAAAAGGTCATAGCTGGATTAAAAAGCAGGAAGCTGGAACCATCTATACCCACCATCAAAAGACAGTTATTGTAGATGCTGATGCTGGCCACCACAAAAGAAAAATTGTAGCTTTTGTTGGAGGCCTCGATTTATGTTTAGGTCGATATGATACTTCGAGGCATCCTCTTTTTCGGACATTGCAAACTACGCACGTGGATGACTTCCACAACCCCAATTTTACGGGACCAGCTACTGGTTGTCCAAGAGAACCATGGCATGATTTGCACTCTAAGATTGATGGTCCAGCAGCATACGACGTCCTAACGAATTTCGAGGAGCGTTGGTTGAGAGCTTCAGAGCCTCGTGGCCTTAAAAAGCTAAAAAGGTTGAATGAAGATGTATTGCTCAAAATTGAAAGAATTCCTGAGATTTTGGGAATTGCTGATGCTGCTCGTTTGTGTAACAATGATCCAGAAGGTTGGAACGTGCAGATTTTTCGTTCGATCGACTCGAATTCGGTGAAAGGATTTCCTGAGGACCCGAAAGATGCTATAAGTAGGAACTTGGTATGTGGGAAGAATGTGATGATAGATATGAGTATACATTCAGCATATGTTAATGCAATTCGTGCTGCCCAACGCTTCATTTATATTGAAAATCAATACTTTCTTGGGTCATCTTATAATTGGAGCGCTCATAAAGACTTGGGGGCTAATAACTTAATACCGATTGAAATTGCCCTTAAAATTGTGGAGAAAATCAGAGCTAAAGAAAGGTTTTCAGCGTATGTGGTTATCCCAATGTGGCCAGAAGGTGTTCCTACAAGCACTCCGATTCAAAGAATTCTCTTTTGGCAGAGTAGGACAATGCAAATGATGTACGAAATGATATATACAGCTTTAGTGGAGGTTGGACTTCATGAACAGTATAAGCCTGAAGACTACTTGAATTTCTTTTGCCTTGGAAACCGTGAGGTGATCAGTGATAGAGATGGCATTGAAGCCGGAAATGGAGAAAAGAATGCTCAATCACTTGTTCGTAAGAGTCGACGTTTTATGATCTATGTCCATTCTAAAGGGATGATAGTAGATGATGAATATGTCATATTGGGATCTGCAAATATCAATCAGCGATCCCTTGAAGGTACTAGAGACACTGAAATAGCAATGGGCGCGTACCAATCTCGTCATTCTTGGTCGTCAAGCAAACGCTCGAGCCCACGTGGTCAGGTCTATGGATATAGAATGTCATTATGGGCAGAGCACACTGGGACTATGGAGGATTGTTTCGAGAGACCAGAGAGTATTGAATGTGTAAGAAGAATCAGATCAGTGGGTGAGAGAAACTGGAGACAGTATGTTGCTGAGGAAGTGACAGAAATGAGAAGCCATCTTCTTAAATATCCATTGCAAGTTGAGCCAACTGGTAAGGTCACTCATCTTCCTGGTTCTGAGACCTTCCCAGACCTTGGTGGTAACATATTGGGAACATTCATAGCCATCCAAGAGAACCTTACAATTTGA 2751 41.29 MLLSFLKSPIFEVPVNILCSLFKGSADPHGHLLILRQVVNNIHLQRKPRFSFILLLSYLSTVSSLLMAGRIFETLSFGSQHGQSNQSLPFSSGNASLKFLLLHGYLDISVKSAKNLPNMDMFHKTLGDVLSKVSFKSSKNSDGQKAPKVTSDPYVTISVSGAVIGRTFVIDNSENPVWMQHFNVPVAHYGAEVHFVVKDHDVVGSQIIGVVAIPIEQLYSGDVVEGTYPILNSSRKPCKPGAVLSLSIRYIPADRAAIFHGGMYASSDHQGVPGTYFPLRKGGKVTLYQDAHVEDGCLPSDFKLHGGVEYEHRSCWDDITESISKARRLIYITGWSVYHNVRLVRDGKAKECSLGDLLKAKSQEGVRVLLLIWDDPTSTSMLGYKTVGMMNTNDEETRRFFKNSSVQVVLCPRSGGKGHSWIKKQEAGTIYTHHQKTVIVDADAGHHKRKIVAFVGGLDLCLGRYDTSRHPLFRTLQTTHVDDFHNPNFTGPATGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRASEPRGLKKLKRLNEDVLLKIERIPEILGIADAARLCNNDPEGWNVQIFRSIDSNSVKGFPEDPKDAISRNLVCGKNVMIDMSIHSAYVNAIRAAQRFIYIENQYFLGSSYNWSAHKDLGANNLIPIEIALKIVEKIRAKERFSAYVVIPMWPEGVPTSTPIQRILFWQSRTMQMMYEMIYTALVEVGLHEQYKPEDYLNFFCLGNREVISDRDGIEAGNGEKNAQSLVRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSLEGTRDTEIAMGAYQSRHSWSSSKRSSPRGQVYGYRMSLWAEHTGTMEDCFERPESIECVRRIRSVGERNWRQYVAEEVTEMRSHLLKYPLQVEPTGKVTHLPGSETFPDLGGNILGTFIAIQENLTI 916
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3679605 3686675 - CmaCh06G007260.1 Cma06g00726 296280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g00726 916 Pfam C2 domain 104 230 IPR000008 -
Cma06g00726 916 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 429 464 IPR001736 GO:0003824
Cma06g00726 916 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 102 252 IPR035892 -
Cma06g00726 916 Gene3D C2 domain 91 250 IPR035892 -
Cma06g00726 916 PIRSF PLD_plant 91 916 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cma06g00726 916 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 761 788 IPR001736 GO:0003824
Cma06g00726 916 Gene3D Endonuclease Chain A 576 816 - -
Cma06g00726 916 Pfam Phospholipase D C terminal 836 906 IPR024632 -
Cma06g00726 916 ProSiteProfiles C2 domain profile. 80 228 IPR000008 -
Cma06g00726 916 PANTHER PHOSPHOLIPASE D 76 916 IPR015679 -
Cma06g00726 916 CDD C2_plant_PLD 100 251 - -
Cma06g00726 916 SUPERFAMILY Phospholipase D/nuclease 610 848 - -
Cma06g00726 916 SUPERFAMILY Phospholipase D/nuclease 270 529 - -
Cma06g00726 916 Pfam Phospholipase D Active site motif 430 464 IPR001736 GO:0003824
Cma06g00726 916 Pfam Phospholipase D Active site motif 762 788 IPR001736 GO:0003824
Cma06g00726 916 SMART C2_3c 105 227 IPR000008 -
Cma06g00726 916 Gene3D Endonuclease Chain A 304 543 - -
Cma06g00726 916 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 76 916 - -
Cma06g00726 916 SMART pld_4 429 464 IPR001736 GO:0003824
Cma06g00726 916 SMART pld_4 761 788 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g00726 Cma-Chr6:3679605 Cma08g00939 Cma-Chr8:5850444 0 dispersed
Cma06g00726 Cma-Chr6:3679605 Cma17g00003 Cma-Chr17:12987 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g00726 K01115 - csv:101208016 1580.46