Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g01123 ATGGAGACCAATCCCGCCGCTGCCGTCGTCGACGTTAGCAATACCCCAAGCATTCCGCCGGAGAAACGGAACCGTTCTATCTTCAACGTCCCGCCGGACTTCTTCGCTTCCTGCAAACTCCTTCGTTCTCCACATTCATACACCTCATCAACCAGCGGCAGCTACAGCTCAAGCGCAGAAAATCCAGTCGATTCGGAGCAGAATTCTAGGGATTTCAAAGAAAGTTCCGTTGCCCAAAGATGGACCTGCAACACATGCAAGGCCGAGTTCGAATCCCTCCTCGACCAGCGTTCGCACTTCAAATCCGACCTCCACCGGTTCAATGTGAAGCTAAGCATTGCTGGAAAGAATATTGTCAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTTTGATGTGTCAAGTATTTCTGGATCAGAGGACGAAACAGAGAAGGAGATTTCCTCTCGGAATGAAGGGTCTAAGGTAACAAATGATAGTGTGAACAAGAAGAAGTTGTTCATTCATCTTCAAACAGGTGAAAGAGTTTCGGTTTGGAAGTGTTTGCTCATAAATGAGTCGGATAGTATTTCGTATGAGGATGATAAAACATCGGTCGGCGGTAATGGTATTCATTCACAATATCTTAGAGAGAATGAAGTCATAGCGAGATTGAAATATCTAAATCACGAGCCAAGAGATGGCACCCATTTGCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTTGCCGGTTGTGTTTTCGACGGGAACTCGGTTGTAGCTCATAAAACCTTTCACAGATATGTAGTGAGAGCCAAGTCTGGAAAGAAGCAGTCATCGAAAGATGCAAGTGGCAAAACAATCAGTTCTGCCGGGGCTTCACTTCGTCGTCATAATGAACTCGCGTTGAAGAAGGAAATTCAAGATCTCCTAGCTGCTTGGAAGTCCTATTTTAATGCTTCTTCTTGCGTTTATATTTATGCTCCTTCAAACAACCGGCAATTACTTTTTAATGGGGATAAGCCATATTTTAGCAATCAGCGTTCTGCTGTTCGGAATATTCCTTTGACTGTTCGAAGGCCTACGTTAAAAGAAGCTCGACGTGTTTATGAACAATTGGTGCAAGTAGCATATGAAGTAGAAGATAAGGAAATATTGTCCACCAGTGAGCACAATTCACCTTCAAGTGTAGTTACAACAGACAATGGCACCCAAGATATAGGTGAACCGAAGGTTATTGGGGACTTGGAAAAGGATGCTTGTACACATCTTGAAGAATCTGTTGAACATCCAATAACTAGAGAGAGTGAAAGTGAAAGTATTTGTATAACTACACCTCTGCATGAAGCATCACAGACTGGAAATGCAGATAAGGTTTTGGAACTCCTTAAACAGGGTCTTGATCCTTGCGCCAAAGATGAACGAGGACGGACTCCTTACATGCTAGCAACTGAAAAGGAAGTCCGAAATAGCTTCAGAAGGTTCATGGCTTCAAACCTGGATAAGTGGGATTGGAATGCTGCTAAAGTGCCGAGCGCGCTAACCAAGGAAATGGAGGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAGCGAAAGGCACGAGCGAAGGAATTGAAGAAGTTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCCGAGGCCGAGGCTGCTGAATCTCAAAAAGCTGCAAAGGCGGAACACGGCAGAGGAATCGGCTCTATTTTGAATCCTCGAGCTGAATCAACCAGTGGAAAACTGATTACCAAAGAGAAGGAAAAACAAAAGGGTTTTTTTGAGCGTGGCTCCCAAATAGACTTAAAACGAGTCCTACTCGATATTTTACTAATCTCTGCAACAATCTACAGATGGTACAGGCTGCCGAGCGCGAAAAGAGAGCAGCAGCTGCCGAGAGGAGAATCGCAGCCATGGCCGCAGCTGCAGCCACCCGAGCGCGAAAAGAGAGCAGCAGCTGCCGAGAGGAGAATCGCAGCCATGGCCGCAGCTGCAGCCACCAATGGTTCCTCGTCAACTATTCCGAACAGCTCTCAGACTAAAACCGGGTTAGCCGGGGACATCAACTGTTCCTGTTGCGGTAAGTCGCTAGCTGGTAAGGTTCCTTTCCACCGGTACAACTATAAATATTGTAGCTCAACATGCATGCATGTACACAAAGAGGTCCTTGAAGAAAACTAG 2187 45.72 METNPAAAVVDVSNTPSIPPEKRNRSIFNVPPDFFASCKLLRSPHSYTSSTSGSYSSSAENPVDSEQNSRDFKESSVAQRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDFDVSSISGSEDETEKEISSRNEGSKVTNDSVNKKKLFIHLQTGERVSVWKCLLINESDSISYEDDKTSVGGNGIHSQYLRENEVIARLKYLNHEPRDGTHLRIVLLASGGHFAGCVFDGNSVVAHKTFHRYVVRAKSGKKQSSKDASGKTISSAGASLRRHNELALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSNQRSAVRNIPLTVRRPTLKEARRVYEQLVQVAYEVEDKEILSTSEHNSPSSVVTTDNGTQDIGEPKVIGDLEKDACTHLEESVEHPITRESESESICITTPLHEASQTGNADKVLELLKQGLDPCAKDERGRTPYMLATEKEVRNSFRRFMASNLDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAEAEAAESQKAAKAEHGRGIGSILNPRAESTSGKLITKEKEKQKGFFERGSQIDLKRVLLDILLISATIYRWYRLPSAKREQQLPRGESQPWPQLQPPEREKRAAAAERRIAAMAAAAATNGSSSTIPNSSQTKTGLAGDINCSCCGKSLAGKVPFHRYNYKYCSSTCMHVHKEVLEEN 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7563983 7568310 + CmaCh06G011230.1 Cma06g01123 296677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g01123 728 ProSiteProfiles Ankyrin repeat profile. 442 471 IPR002110 GO:0005515
Cma06g01123 728 MobiDBLite consensus disorder prediction 138 160 - -
Cma06g01123 728 MobiDBLite consensus disorder prediction 47 65 - -
Cma06g01123 728 SUPERFAMILY Ankyrin repeat 442 494 IPR036770 -
Cma06g01123 728 Pfam Vms1-associating treble clef domain 690 723 IPR041540 -
Cma06g01123 728 MobiDBLite consensus disorder prediction 543 563 - -
Cma06g01123 728 MobiDBLite consensus disorder prediction 629 650 - -
Cma06g01123 728 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 21 724 - -
Cma06g01123 728 MobiDBLite consensus disorder prediction 384 405 - -
Cma06g01123 728 ProSitePatterns Zinc finger C2H2 type domain signature. 83 105 IPR013087 -
Cma06g01123 728 MobiDBLite consensus disorder prediction 538 575 - -
Cma06g01123 728 MobiDBLite consensus disorder prediction 386 403 - -
Cma06g01123 728 MobiDBLite consensus disorder prediction 1 26 - -
Cma06g01123 728 MobiDBLite consensus disorder prediction 139 156 - -
Cma06g01123 728 Pfam Bacteroidetes VLRF1 release factor 237 375 IPR041175 -
Cma06g01123 728 Coils Coil 515 565 - -
Cma06g01123 728 MobiDBLite consensus disorder prediction 47 74 - -
Cma06g01123 728 Gene3D - 432 557 IPR036770 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g01123 K26089 - csv:101216211 976.852