Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma06g01123 | ATGGAGACCAATCCCGCCGCTGCCGTCGTCGACGTTAGCAATACCCCAAGCATTCCGCCGGAGAAACGGAACCGTTCTATCTTCAACGTCCCGCCGGACTTCTTCGCTTCCTGCAAACTCCTTCGTTCTCCACATTCATACACCTCATCAACCAGCGGCAGCTACAGCTCAAGCGCAGAAAATCCAGTCGATTCGGAGCAGAATTCTAGGGATTTCAAAGAAAGTTCCGTTGCCCAAAGATGGACCTGCAACACATGCAAGGCCGAGTTCGAATCCCTCCTCGACCAGCGTTCGCACTTCAAATCCGACCTCCACCGGTTCAATGTGAAGCTAAGCATTGCTGGAAAGAATATTGTCAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTTTGATGTGTCAAGTATTTCTGGATCAGAGGACGAAACAGAGAAGGAGATTTCCTCTCGGAATGAAGGGTCTAAGGTAACAAATGATAGTGTGAACAAGAAGAAGTTGTTCATTCATCTTCAAACAGGTGAAAGAGTTTCGGTTTGGAAGTGTTTGCTCATAAATGAGTCGGATAGTATTTCGTATGAGGATGATAAAACATCGGTCGGCGGTAATGGTATTCATTCACAATATCTTAGAGAGAATGAAGTCATAGCGAGATTGAAATATCTAAATCACGAGCCAAGAGATGGCACCCATTTGCGGATAGTGTTGCTTGCAAGTGGTGGGCACTTTGCCGGTTGTGTTTTCGACGGGAACTCGGTTGTAGCTCATAAAACCTTTCACAGATATGTAGTGAGAGCCAAGTCTGGAAAGAAGCAGTCATCGAAAGATGCAAGTGGCAAAACAATCAGTTCTGCCGGGGCTTCACTTCGTCGTCATAATGAACTCGCGTTGAAGAAGGAAATTCAAGATCTCCTAGCTGCTTGGAAGTCCTATTTTAATGCTTCTTCTTGCGTTTATATTTATGCTCCTTCAAACAACCGGCAATTACTTTTTAATGGGGATAAGCCATATTTTAGCAATCAGCGTTCTGCTGTTCGGAATATTCCTTTGACTGTTCGAAGGCCTACGTTAAAAGAAGCTCGACGTGTTTATGAACAATTGGTGCAAGTAGCATATGAAGTAGAAGATAAGGAAATATTGTCCACCAGTGAGCACAATTCACCTTCAAGTGTAGTTACAACAGACAATGGCACCCAAGATATAGGTGAACCGAAGGTTATTGGGGACTTGGAAAAGGATGCTTGTACACATCTTGAAGAATCTGTTGAACATCCAATAACTAGAGAGAGTGAAAGTGAAAGTATTTGTATAACTACACCTCTGCATGAAGCATCACAGACTGGAAATGCAGATAAGGTTTTGGAACTCCTTAAACAGGGTCTTGATCCTTGCGCCAAAGATGAACGAGGACGGACTCCTTACATGCTAGCAACTGAAAAGGAAGTCCGAAATAGCTTCAGAAGGTTCATGGCTTCAAACCTGGATAAGTGGGATTGGAATGCTGCTAAAGTGCCGAGCGCGCTAACCAAGGAAATGGAGGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAGCGAAAGGCACGAGCGAAGGAATTGAAGAAGTTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCCGAGGCCGAGGCTGCTGAATCTCAAAAAGCTGCAAAGGCGGAACACGGCAGAGGAATCGGCTCTATTTTGAATCCTCGAGCTGAATCAACCAGTGGAAAACTGATTACCAAAGAGAAGGAAAAACAAAAGGGTTTTTTTGAGCGTGGCTCCCAAATAGACTTAAAACGAGTCCTACTCGATATTTTACTAATCTCTGCAACAATCTACAGATGGTACAGGCTGCCGAGCGCGAAAAGAGAGCAGCAGCTGCCGAGAGGAGAATCGCAGCCATGGCCGCAGCTGCAGCCACCCGAGCGCGAAAAGAGAGCAGCAGCTGCCGAGAGGAGAATCGCAGCCATGGCCGCAGCTGCAGCCACCAATGGTTCCTCGTCAACTATTCCGAACAGCTCTCAGACTAAAACCGGGTTAGCCGGGGACATCAACTGTTCCTGTTGCGGTAAGTCGCTAGCTGGTAAGGTTCCTTTCCACCGGTACAACTATAAATATTGTAGCTCAACATGCATGCATGTACACAAAGAGGTCCTTGAAGAAAACTAG | 2187 | 45.72 | METNPAAAVVDVSNTPSIPPEKRNRSIFNVPPDFFASCKLLRSPHSYTSSTSGSYSSSAENPVDSEQNSRDFKESSVAQRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDFDVSSISGSEDETEKEISSRNEGSKVTNDSVNKKKLFIHLQTGERVSVWKCLLINESDSISYEDDKTSVGGNGIHSQYLRENEVIARLKYLNHEPRDGTHLRIVLLASGGHFAGCVFDGNSVVAHKTFHRYVVRAKSGKKQSSKDASGKTISSAGASLRRHNELALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSNQRSAVRNIPLTVRRPTLKEARRVYEQLVQVAYEVEDKEILSTSEHNSPSSVVTTDNGTQDIGEPKVIGDLEKDACTHLEESVEHPITRESESESICITTPLHEASQTGNADKVLELLKQGLDPCAKDERGRTPYMLATEKEVRNSFRRFMASNLDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAEAEAAESQKAAKAEHGRGIGSILNPRAESTSGKLITKEKEKQKGFFERGSQIDLKRVLLDILLISATIYRWYRLPSAKREQQLPRGESQPWPQLQPPEREKRAAAAERRIAAMAAAAATNGSSSTIPNSSQTKTGLAGDINCSCCGKSLAGKVPFHRYNYKYCSSTCMHVHKEVLEEN | 728 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 7563983 | 7568310 | + | CmaCh06G011230.1 | Cma06g01123 | 296677 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma06g01123 | 728 | ProSiteProfiles | Ankyrin repeat profile. | 442 | 471 | IPR002110 | GO:0005515 | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 138 | 160 | - | - | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 47 | 65 | - | - | |
Cma06g01123 | 728 | SUPERFAMILY | Ankyrin repeat | 442 | 494 | IPR036770 | - | |
Cma06g01123 | 728 | Pfam | Vms1-associating treble clef domain | 690 | 723 | IPR041540 | - | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 543 | 563 | - | - | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 629 | 650 | - | - | |
Cma06g01123 | 728 | PANTHER | ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 21 | 724 | - | - | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 384 | 405 | - | - | |
Cma06g01123 | 728 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 83 | 105 | IPR013087 | - | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 538 | 575 | - | - | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 386 | 403 | - | - | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 139 | 156 | - | - | |
Cma06g01123 | 728 | Pfam | Bacteroidetes VLRF1 release factor | 237 | 375 | IPR041175 | - | |
Cma06g01123 | 728 | Coils | Coil | 515 | 565 | - | - | |
Cma06g01123 | 728 | MobiDBLite | consensus disorder prediction | 47 | 74 | - | - | |
Cma06g01123 | 728 | Gene3D | - | 432 | 557 | IPR036770 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma06g01123 | K26089 | - | csv:101216211 | 976.852 |