Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g01135 ATGGAATTCGAAGCTCAGGCTCAGAGCTCGGACGGTTCGTCGACGTCTTCGAAGCTGGTTCTTTATTCTTTCTGGCAGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAATCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTAAACCTTGGGAGAGGAGAGCAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTCAAGTATGTTCCTGTATTAGTAGATGGTGCTGTGGTAGTTTCAGATTCTTACGCGATTTTACTGTATTTGGAAGAGAAATATCCACAGAAGGCGTTGCTGCCTGCTGATCTTCATTTAAAATCTCTTAATCTGCAAGTGGCAAGTATTGTCAGCTCAAGCATACAGCCTCTTATTATGTTGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCCAGAAGAGCAACTACCATGGGCTCAGACTAATATAGAAAATGGTTTCAATGCTCTAGAGAAACTGCTGAAGAATTTTTCTGGCCGATATGCGCTGGGAGAAGAAGTATATATGGCTGATGTATTTTTGGCTCCCCAAGTTTCTGTTGCTTTTGGGAGGTTCAACATTGACACGTCCAAGTTCCCTGCTTTAGCAAGGATTTATGAATCTTACAAGATGTTACCAGAATTCCAAGCCTCGTCACCAGAAAGGCAGCCCGACGCCCTTCACTAG 687 44.1 MEFEAQAQSSDGSSTSSKLVLYSFWQSSCSWRVRFALNLKGLSYEYRAVNLGRGEQLSPDFERLNPLKYVPVLVDGAVVVSDSYAILLYLEEKYPQKALLPADLHLKSLNLQVASIVSSSIQPLIMLGLLKTIEEKFGPEEQLPWAQTNIENGFNALEKLLKNFSGRYALGEEVYMADVFLAPQVSVAFGRFNIDTSKFPALARIYESYKMLPEFQASSPERQPDALH 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7652425 7656514 + CmaCh06G011350.1 Cma06g01135 296689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g01135 228 SFLD Main (cytGST) 19 208 - -
Cma06g01135 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 17 98 IPR004045 -
Cma06g01135 228 Pfam Glutathione S-transferase, N-terminal domain 21 97 IPR004045 -
Cma06g01135 228 Gene3D - 100 228 - -
Cma06g01135 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 103 228 IPR010987 -
Cma06g01135 228 Gene3D Glutaredoxin 21 97 - -
Cma06g01135 228 CDD GST_C_Zeta 104 223 IPR034330 -
Cma06g01135 228 Pfam Glutathione S-transferase, C-terminal domain 142 216 IPR004046 -
Cma06g01135 228 SUPERFAMILY GST C-terminal domain-like 99 226 IPR036282 -
Cma06g01135 228 SFLD Glutathione Transferase (cytosolic) 19 208 IPR040079 -
Cma06g01135 228 PANTHER MALEYLACETOACETATE ISOMERASE 9 227 - -
Cma06g01135 228 CDD GST_N_Zeta 19 91 IPR034333 -
Cma06g01135 228 SUPERFAMILY Thioredoxin-like 17 101 IPR036249 -
Cma06g01135 228 TIGRFAM maiA: maleylacetoacetate isomerase 21 226 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cma06g01135 228 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 9 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00641 Cma-Chr2:3887013 Cma06g01135 Cma-Chr6:7652425 1.32E-79 dispersed
Cma02g00643 Cma-Chr2:3895323 Cma06g01135 Cma-Chr6:7652425 1.84E-91 dispersed
Cma06g01135 Cma-Chr6:7652425 Cma03g00384 Cma-Chr3:4366133 1.57E-11 dispersed
Cma06g01135 Cma-Chr6:7652425 Cma06g01277 Cma-Chr6:8499592 2.42E-15 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g01135 K01800 - csv:101213403 363.229