Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g01155 ATGGAAGAAGAAGAAGGAGAAGTGAAGCTGTTCAGAACGTGGTCGAGTCCATTCGCTCTGAGAATAGTATGGGCGTTGAAGTTGAAAGGAATAGAATACGACACCGTTTACGAAGATCTGGCCAACAAGAGTTCGTCGCTTTTGGAGTATAATCCGATTCACAAGAAGGTTCCGGTGCTCGTCCATGGCGGAAAGCCGATCGCCGAATCGCTCGTCATCCTCGAATACATCGATGAAATATGGAACCAAAATCCATTGCTGCCTCAGGATCCTTACCAGAGAGCCCTTGCTCGCTTTTGGGCCAAATTTGGGGACGATAAGGTTTGGGAATCAATGAAGAAAGTGTTTATGAAGGAAGGGAAGTTGAAAGAGGAAGGGATAGAAGAAGCGAAGGAGAATTTGAAGCATTTGGAAGAAGAGTTAAAGGCGGGGGGGAAGAGGTTCTTTGGAGGGGAAGTGATAGGGTTTGTGGATGTTGCGCTTGGGTGGCTTGCAAACTTACCAAGTGTGTTGGAGGAAGTGATTGGACTTAGCCTCATAACTCAACAAACCTTCCCCCTCTTGTCTAAATGGACTCACGAATTTGCTAATGCCCCAATCATCAATCAACATTGGCCTCCTAAACAACAACTTGTCACCAAGTTCAAAGCTATGCATCAAATTTTCATGAATAAACAAGCATGA 684 45.18 MEEEEGEVKLFRTWSSPFALRIVWALKLKGIEYDTVYEDLANKSSSLLEYNPIHKKVPVLVHGGKPIAESLVILEYIDEIWNQNPLLPQDPYQRALARFWAKFGDDKVWESMKKVFMKEGKLKEEGIEEAKENLKHLEEELKAGGKRFFGGEVIGFVDVALGWLANLPSVLEEVIGLSLITQQTFPLLSKWTHEFANAPIINQHWPPKQQLVTKFKAMHQIFMNKQA 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7777316 7778827 - CmaCh06G011550.1 Cma06g01155 296709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g01155 227 CDD GST_N_Tau 8 81 - -
Cma06g01155 227 SFLD Main (cytGST) 4 226 - -
Cma06g01155 227 PANTHER S-TRANSFERASE, PUTATIVE-RELATED 6 219 - -
Cma06g01155 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 215 IPR010987 -
Cma06g01155 227 Gene3D - 87 226 - -
Cma06g01155 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Cma06g01155 227 Gene3D Glutaredoxin 1 86 - -
Cma06g01155 227 SUPERFAMILY GST C-terminal domain-like 79 222 IPR036282 -
Cma06g01155 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 219 IPR045073 -
Cma06g01155 227 SFLD Main.3: Omega- and Tau-like 4 226 IPR045073 -
Cma06g01155 227 Coils Coil 120 147 - -
Cma06g01155 227 CDD GST_C_Tau 91 218 IPR045074 GO:0004364|GO:0006749
Cma06g01155 227 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Cma06g01155 227 Pfam Glutathione S-transferase, C-terminal domain 108 199 IPR004046 -
Cma06g01155 227 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01155 Cma14g01961 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g01155 Cma-Chr6:7777316 Cma14g01861 Cma-Chr14:13213235 8.87E-71 dispersed
Cma18g01154 Cma-Chr18:9264619 Cma06g01155 Cma-Chr6:7777316 3.20E-51 transposed
Cma14g01961 Cma-Chr14:13801828 Cma06g01155 Cma-Chr6:7777316 2.27E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g01155 K00799 - csv:101219529 353.214