Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g01221 ATGGAGCAGCAAAATCCGCATGGGAGAGGAGCCGATGCAGTTTTAAATCTTCAGCCAAACTCCTCGGTTGCTATTGCATATCACTCACTTTTTGGTCCACATGATGATTTAGTTCTTCTTGAGGTTGATGAAAAGCTTCTGGAAGAAGTTCTCCACGAACGAGTAAGCATCAGAGGACAGGCAGAAGAAGAAGCAGTCTTTTGCACGAAGTCGAAAACATATGGAATAAAATATGTAGGAACGTCCAATTCTGTACTCCTCATACCCCCATCAGGTCGATCGGAATACTACGAAAATGAGCTAGATAGCCAGGGGAATGACAGCACTAAAGAAGTTGTTCCTGTGATTAAACTTGCTCCAGGAATCATGGAACTTGTTGAGATTGCTCCCAGAATTGATAAGCTTAAATTGCTTCTTTCAGAGAATCCTTACAGCTTAGCTGATGAGTGGGAAAGCGAAGAGATGGACAAATGTGAGAAGCAAATGTATAATTGGAATGATCTTTTAGACAAGGTTCAGGCTAGTGATGATGAACTGAAAGCTGGATTACGAGCACTTTCCGCAGTTGAGATTGATGGATACTGGAGACTTGTGGACGAAAAATACATGGACTCCATGCTACAAATGCTCTTGAATAACAGAATTTTAAACGACTGGTCTCTTGATGCACTTGATGAAGGTGTACTCATGAAAGTGATGAAAATGGATGGTTTTTCTGAAACACTCGTGCATCATTGTCTCGACGTCTATGGCGATAAACTCGAAGGAGATGAGGGGAATAGCTGTTTATGGAGATTGGATGAGAAACGTGTTTGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAAGGAAAGATGAAGGTGGAGCATTTCATGGATGAATGGCAAAAGAAAATCCCTGTTGAAATGCATGCTAACTTTGACATGTTGGAAGGTGAAGTTCTGACCGAGAGGCTCGGGGTCGAGACGTGGGTTCGTGGTTTTAGAGTATCTTCATTGCCATTGAATCCTGTTGAGCGTTTCTCCATTTTGTTTAGAGAACGACCAAAATGGGAGTGGAAGGATCTGCAGCCATACATTAGGGATCTTACAGTTCCAGGTCTTTCATCTGAAGGTTTACTTCTCAAATACACCCGACGAACTCAACCGAACCCAGAAGCCGAACCCGTGTTCAGTGCAAGATAG 1182 42.72 MEQQNPHGRGADAVLNLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQAEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSQGNDSTKEVVPVIKLAPGIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQMYNWNDLLDKVQASDDELKAGLRALSAVEIDGYWRLVDEKYMDSMLQMLLNNRILNDWSLDALDEGVLMKVMKMDGFSETLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPVEMHANFDMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPNPEAEPVFSAR 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8143149 8145579 - CmaCh06G012210.1 Cma06g01221 296775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g01221 393 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 11 393 IPR019128 GO:0007064|GO:0031390
Cma06g01221 393 Pfam Sister chromatid cohesion protein Dcc1 38 359 IPR019128 GO:0007064|GO:0031390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g01221 K11271 - csv:101203202 675.626