Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g01244 ATGGGTAGCGGAGAAAAGGTCTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTATATGACGTGACCAAATTCTTAGATGACCATCCTGGAGGTGATGATGTTTTGTTATCAGCCACAGGAAAAGATGCAACGGACGATTTTGAAGATGTGGGGCACAGTGACAACGCAAGAGAAATGATGGATCAATACTATGTCGGAGAGATTGATGGTTCGACAATTCCGAAGAAGGTTGCATACACGCCTCCGAAACAGCCTCATTACAATCAGGACAAGACGTCGGAGTTCATCATCAAGCTCCTCCAGTTCCTCGTCCCGCTTGCAATTTTGGGATTGGCAGTTGCCTTACGTTTCTACACGAAACAAGCTTGA 405 46.42 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLDDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDGSTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVALRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8291203 8294836 + CmaCh06G012440.1 Cma06g01244 296798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g01244 134 Gene3D - 3 84 IPR036400 -
Cma06g01244 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 91 IPR036400 -
Cma06g01244 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cma06g01244 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cma06g01244 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cma06g01244 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cma06g01244 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cma06g01244 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cma06g01244 134 PANTHER CYTOCHROME B5 1 132 - -
Cma06g01244 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cma06g01244 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cma06g01244 134 PANTHER CYTOCHROME B5 1 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01681 Cma-Chr2:9474696 Cma06g01244 Cma-Chr6:8291203 1.66E-66 dispersed
Cma06g01226 Cma-Chr6:8175526 Cma06g01244 Cma-Chr6:8291203 7.93E-16 dispersed
Cma06g01244 Cma-Chr6:8291203 Cma17g00107 Cma-Chr17:521732 1.44E-75 dispersed
Cma05g00451 Cma-Chr5:2070589 Cma06g01244 Cma-Chr6:8291203 1.32E-37 transposed
Cma14g01890 Cma-Chr14:13376466 Cma06g01244 Cma-Chr6:8291203 9.76E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g01244 K23490 - csv:101214209 273.092