Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma06g01282 | ATGGAAGACCCTGCTATTTATTCGGCTGGTCAAGTAAATCTAGCGGTTGGGTGTCTTGTTTGGATTGAGGATCCTGAGGTAGCCTGGATAGATGGGGAAGTAGTGGCAGTTAATGGTCAAGATATCAGAGTACTCTGTTCATCAGGAACTACTGTTGAGGCCAAATCATCAAATGCCTATCCAAAGGATCCTGAATTTCCATCATGTGGTGTGGATGATATGACAAAACTAGCTTATTTACACGAGCCAGGACTGCTACAGAACTTGAAATGTCGTTATGATGTTAATGAAATTTATACCTATACTGGGGGTATACTAATAGCCGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATGGCATAATGCAACAATATAAAGGGGCGGATTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCAAATTCTGCATATAGCCAGTCAATTTTAGTTAGCGGGGAAAGTGGAGCTGGTAAAACGGAGAGTACAAAGATGCTTATGCGCTATCTTGCCCATGTTGGAGGGAGAGATGGAGGGAAGGCTGCAACTGGTGAACGCTCTGTAGAGCAGCAAGTACTAGAGTCCAACCCTGTTCTAGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCCAGTCGGTTTGGTAAATTTGTGGAGATCCAATTTGACCGAAGTTGGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGGAATTATCATTGCTTTTATATGCTTTGTGCATCAACAGAGGAAGTTGAAAAGTATAAGTTAGGGAATCCAAGAACATTCCATTATCTTAATCAATCTAATTGCTATGAACTTGATGGACTGGACGAATCCAAGGAATATACTTCTACTAGAGAAGCTATGGATGTCGTTGGAATAAGTACAGCTGAGCAGGATGCTATATTTCGAGTGGTAGCTGCAGTACTTCATTTGGGCAATGTTGAATTTACAAAGGGGAAGGATGCGGATTCCTCTGAACCTAAGGATGACAAAGCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGTGTGATAGTTACACGTGATGAAACCATAACTAAATGTCTCGATACAGTATCTGCAACTCTTAGTAGGGATGCTTTGGCAAAAATCGTATATTCAAGATTATTTGATTGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCGTGATTCAAAACACTTAATCGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATTAACCTGACAAATGAGAAATTGCAGCAACATTTCAACCAGCATGTGTTCAAGATGGAGCAAGACGAATATACAAAAGAAGAAATTAACTGGAGTTATATTGAATTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGCGTCATTGCGCTTCTGGATGAGGCTTGCATGTTTCCGAGATCCACACATGAGACTTTTGCTCAGAAACTATATCAAACTTTTAGGGACCATAAGCGATTTAGTAAGCCTAAATTATCACGAACTGACTTCACAATTTGTCATTATGCTGGGGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGTTGGGTGCTTCTAAGTGCTCCTTTGTTGCAGGGCTATTCCCCCCTTTACCTGAAGAAACCTCCAAATCATCCAAGTTCTCATCAATAGGAACTAGATTTAAGCAACAACTTCAAACTTTGCTCGAGACACTAAATGCTACTGAGCCACACTACATACGCTGTGTAAAGCCAAACAATCTTCTTAAACCATCCATCTTTGAGAATAATAATGTTTTACAGCAGCTCCGATGTGGGGGAGTCATGGAAGCAATCAGGATCAGTTGTGCTGGATATCCCACTAGGAAGACGTTTGATGAATTTATTGGTCGGTTTACTATCTTGGCACCTGATGTTTTGAAGGGGAGCTCTGATGAAGCCAATGCGTGTAAGAAGCTTTTGCAGAAAGTTAACCTTAATGGGTATCAGATTGGTAAAACCAAAGTGTTTCTTAGGGCTGGTCAAATGGCACAATTAGATGGCTGCCGAACTGAGGTCTTGGGAAGATCTGCTAGTGTTATCCAAAGGAAAGTTCGCTCATATTTGGAACGGAATCGTTTTATTTCGTTGCGGTTGGCTGCTATACAAATTCAAGCACTTTGTAGAGGGGAAGTTGCACGCCAGCAGTATGAAAACATCAGAATGGAAGCTGCTTCTATCAAAATCCAAAAGTATTGGCGCATGTGTTCTGCCCGAAGATCCTATAAAAGATTGCGCTCTTCAGCTGTAGCTATTCAGGCTGGTATCCATGGCATGGTTGCTCGTAAAGAGCTCAAGTTCAGGAGGGATACAAGAGCTGCAATTATCATTCAGAGTCGATGTCGGCAATACTTGGCCCATACGCATTATTTAAGGCTGCTAAGGAAACTGGCGCTCTCCAAGCTGCCAAAGATATGTTGGAAAAGCAAGTGGTGTGTGCAGGCTGCTAAGGAAACTGGCGCTCTCCAAGCTGCCAAAGATATGTTGGAAAAGCAAGTGGAAGAACTAACATTGAGATTGGAGCAAGAGAAACAAATGAGGGCTGACATGGAGGATGCCAAGACTCAAGAAAACACAAAATTGAAGTCTGCTTTGGAAGAAATACAAACTCAATTTCAGGAAACTAAAGCACTGCTTATTGAGGAACGTGAAGCTGCAAAGAAAGTAGTTGAGGAACGTGAAGCTGCAAAGAAAGTAGTTGAGGAAATCCGTGAAGCTTCAAAGAAAGTAGTTGAGGAAGTCCCAATAGCTGCAAAGAAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGAAAGTAGTTGAGGAAGTCCCAATAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGCGAAGCAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGCGAAGCAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGAAAGTAGTTGAGGAAGTCCCAGTAGCTGCACAGAAAGTAGTTGTGGAAGTCCCAGTCATACAGGAGGTTCCAGTTGTTGATCATGAGCTTATCAATAAGCTAACTACTGAAAATGAAGAACTTAAGGCTCTTGTTAGTTCTTTGGAAAGTAAAATTGATGAAACAGAAAGGAAATTTGAGGAAAGTAACAGACTTAGTGAAGAGCGGCTGAAGCAGGCTACGGAGGCAGAGTCAAAGATAATAGAATTAAAGACTGCCATGCAAAGGCTTGAGGAAAAGTTATCTGACTTGGAAACTGAGGACCAAATTCTGAGGCAGCAAGCACTGCAAAAGCCTCCTTCAAGAAAAATGTCTGGACATATAACAATGCAGCCTTTGGAGAATGGCCACCTTGAATTATTAAGCAATGCACCATCAAAAAAGTATGGTACCGATGCTGATGCAAAATTGAGGAGATCCCAAATTGAAAGGCAGAACGAAGGCATGGATGCTCTATCGAAATACTTGACACGGGATCTTGGGTACAGTGAGGGAAAACCTGTTGCTGCTTTTGTAATTTATAAATCTCTTCTCCATTGGAGATCATTTGAAGCAGAAAAAACAAGTGTATTTGATCGTCTTATTCAGATAATTGGTTCTGCAATTGAGGGGTTTCGCTCATCTTCTGCCAACCTTCCAGTTGGCACCCTTGATGTTGTACGGCAAGTTGAAGCCAAATATCCTGCTCTACTTTTCAAGCAGCAGCTAACAGCGTATGTAGAAAAGATATATGGAATAGTTAGAGACAACCTGAAGAAGGAACTATCGCCGTTGCTTTCAACTTGTGTCCAAGCTCCCAAAACTTCGGAAGAGAATATTGAGGAATCATCTGACGAGACAAAGAGTAGCAGCCTTCTCAATAGTTCATGGGGCAGCATCATCCATCACCTTAATCATCATCTTAGTAGATTGCAGACGAACTTCGTGCCTTCCGTTTTGGTCCAGAAGATATTCACTCAGGTTTTTTCATACATCAACGTACAGCTTTTCAATAGTCTTCTACTTCGTCAAGAGTGCTGCACGTTTAGTAACGGAGAATATGTGAAGTCAGGACTTGCTGAGTTAGAGAGTTGGTGTACCCAAGCCAAAGAAGAGTATGTCGGGTTATCTTGGGATGAGCTAAAACCAGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGACCTCTGTCCAATATTAAGCGTTCAGCAGCTTTATAGAATATGTACTCTTTATTGTGACGACAATTACAATACCAGAAGCGTAGCTGAAGAGGTTATTTCTAGCATGAAGGTTTTGATGCCCGAAGATTCCAATGATGAAGACAATAATTCCTTTTTGTTGGATGATAATTCCAGCATACCTTTCTCAGTCGATGACATATCCAGTTCCTTGCAAGATAAGAATTTTCAAGATATTAAGCCTCCAGCAGAACTACTTGAGAATCCGGTCTTCCAATTTTTACAGGAATAA | 4758 | 41.38 | MEDPAIYSAGQVNLAVGCLVWIEDPEVAWIDGEVVAVNGQDIRVLCSSGTTVEAKSSNAYPKDPEFPSCGVDDMTKLAYLHEPGLLQNLKCRYDVNEIYTYTGGILIAVNPFRRLPHLYDNGIMQQYKGADLGELSPHPFAIANSAYSQSILVSGESGAGKTESTKMLMRYLAHVGGRDGGKAATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDRSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCASTEEVEKYKLGNPRTFHYLNQSNCYELDGLDESKEYTSTREAMDVVGISTAEQDAIFRVVAAVLHLGNVEFTKGKDADSSEPKDDKARFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDTVSATLSRDALAKIVYSRLFDWIVDKINNSIGQDRDSKHLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQDEYTKEEINWSYIEFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAQKLYQTFRDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLGASKCSFVAGLFPPLPEETSKSSKFSSIGTRFKQQLQTLLETLNATEPHYIRCVKPNNLLKPSIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPDVLKGSSDEANACKKLLQKVNLNGYQIGKTKVFLRAGQMAQLDGCRTEVLGRSASVIQRKVRSYLERNRFISLRLAAIQIQALCRGEVARQQYENIRMEAASIKIQKYWRMCSARRSYKRLRSSAVAIQAGIHGMVARKELKFRRDTRAAIIIQSRCRQYLAHTHYLRLLRKLALSKLPKICWKSKWCVQAAKETGALQAAKDMLEKQVEELTLRLEQEKQMRADMEDAKTQENTKLKSALEEIQTQFQETKALLIEEREAAKKVVEEREAAKKVVEEIREASKKVVEEVPIAAKKVVEEVPVAAKEVVEEVPVAAKKVVEEVPIAAKEVVEEVPVAAKEVVEEVPVAAKEVVEEVPAKQVVEEVPVAAKEVVEEVPAKQVVEEVPVAAKKVVEEVPVAAQKVVVEVPVIQEVPVVDHELINKLTTENEELKALVSSLESKIDETERKFEESNRLSEERLKQATEAESKIIELKTAMQRLEEKLSDLETEDQILRQQALQKPPSRKMSGHITMQPLENGHLELLSNAPSKKYGTDADAKLRRSQIERQNEGMDALSKYLTRDLGYSEGKPVAAFVIYKSLLHWRSFEAEKTSVFDRLIQIIGSAIEGFRSSSANLPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIYGIVRDNLKKELSPLLSTCVQAPKTSEENIEESSDETKSSSLLNSSWGSIIHHLNHHLSRLQTNFVPSVLVQKIFTQVFSYINVQLFNSLLLRQECCTFSNGEYVKSGLAELESWCTQAKEEYVGLSWDELKPVRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTLYCDDNYNTRSVAEEVISSMKVLMPEDSNDEDNNSFLLDDNSSIPFSVDDISSSLQDKNFQDIKPPAELLENPVFQFLQE | 1585 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 8516480 | 8540422 | - | CmaCh06G012820.1 | Cma06g01282 | 296836 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma06g01282 | 1585 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 15 | 64 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cma06g01282 | 1585 | Coils | Coil | 889 | 972 | - | - | |
| Cma06g01282 | 1585 | Coils | Coil | 1108 | 1142 | - | - | |
| Cma06g01282 | 1585 | Pfam | IQ calmodulin-binding motif | 834 | 853 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | Pfam | IQ calmodulin-binding motif | 739 | 757 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | Pfam | IQ calmodulin-binding motif | 787 | 806 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | Pfam | IQ calmodulin-binding motif | 763 | 780 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 40 | 789 | IPR027417 | - | |
| Cma06g01282 | 1585 | PANTHER | MYOSIN | 13 | 1293 | - | - | |
| Cma06g01282 | 1585 | PANTHER | MYOSIN | 1293 | 1583 | - | - | |
| Cma06g01282 | 1585 | PANTHER | MYOSIN-7 | 13 | 1293 | - | - | |
| Cma06g01282 | 1585 | ProSiteProfiles | Dilute domain profile. | 1307 | 1531 | IPR002710 | - | |
| Cma06g01282 | 1585 | PANTHER | MYOSIN-7 | 1293 | 1583 | - | - | |
| Cma06g01282 | 1585 | Gene3D | - | 441 | 625 | - | - | |
| Cma06g01282 | 1585 | Gene3D | - | 737 | 786 | - | - | |
| Cma06g01282 | 1585 | Gene3D | - | 787 | 837 | - | - | |
| Cma06g01282 | 1585 | Coils | Coil | 1150 | 1184 | - | - | |
| Cma06g01282 | 1585 | Gene3D | - | 668 | 734 | - | - | |
| Cma06g01282 | 1585 | SMART | iq_5 | 784 | 806 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | SMART | iq_5 | 832 | 854 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | SMART | iq_5 | 759 | 781 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | SMART | iq_5 | 807 | 829 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | SMART | iq_5 | 736 | 758 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | Gene3D | - | 255 | 312 | - | - | |
| Cma06g01282 | 1585 | ProSiteProfiles | IQ motif profile. | 808 | 837 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | PRINTS | Myosin heavy chain signature | 431 | 459 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cma06g01282 | 1585 | PRINTS | Myosin heavy chain signature | 148 | 173 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cma06g01282 | 1585 | PRINTS | Myosin heavy chain signature | 484 | 512 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cma06g01282 | 1585 | PRINTS | Myosin heavy chain signature | 199 | 226 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cma06g01282 | 1585 | PRINTS | Myosin heavy chain signature | 99 | 118 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cma06g01282 | 1585 | CDD | MyosinXI_CBD | 1233 | 1554 | IPR037975 | GO:0007015 | |
| Cma06g01282 | 1585 | ProSiteProfiles | IQ motif profile. | 760 | 789 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | Pfam | Myosin head (motor domain) | 71 | 722 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cma06g01282 | 1585 | SMART | DIL_2 | 1406 | 1513 | IPR002710 | - | |
| Cma06g01282 | 1585 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 787 | 858 | IPR027417 | - | |
| Cma06g01282 | 1585 | Pfam | DIL domain | 1407 | 1509 | IPR002710 | - | |
| Cma06g01282 | 1585 | CDD | MYSc_Myo11 | 83 | 722 | IPR036018 | - | |
| Cma06g01282 | 1585 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 314 | 603 | - | - | |
| Cma06g01282 | 1585 | ProSiteProfiles | Myosin motor domain profile. | 69 | 734 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Cma06g01282 | 1585 | ProSiteProfiles | IQ motif profile. | 785 | 814 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | Pfam | Myosin N-terminal SH3-like domain | 19 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Cma06g01282 | 1585 | Gene3D | Kinesin motor domain | 72 | 664 | IPR036961 | - | |
| Cma06g01282 | 1585 | ProSiteProfiles | IQ motif profile. | 833 | 861 | IPR000048 | GO:0005515 | |
| Cma06g01282 | 1585 | SMART | MYSc_2a | 63 | 735 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma06g01282 | Cma-Chr6:8516480 | Cma17g01361 | Cma-Chr17:9101620 | 0 | dispersed | |
| Cma06g01282 | Cma-Chr6:8516480 | Cma08g00051 | Cma-Chr8:276033 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma06g01282 | K10357 | - | csv:101221506 | 1651.72 |