Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g01328 ATGCACGTGACTTGGACGCTGTTCCCCCCTCTTAAATACCCCTCATCCATCCCCATTTCTTTCCGTCCTTCTCCTCCTCCGCCGCCGCCGCCACCGCCACCGCCACAGCCACATCTTCCGGCGAAAACTCAGAGACTGCGTTTTGATTTATTTGGAAGCATGGCCGGAGAGCCACTGAAAGTGTTGGACGCGTTGGATGTAGCCAAGACGCAATGGTACCATTTCACGGCCATTGTGATCGCCGGAATGGGCTTTTTCACCGACGCCTATGATCTCTTCTGCGTATCTCTTGTCACCAAATTGCTGGGTCGGATTTATTATCACAAACAGGGCTCTGACAAGCCTGGTGAATTGCCTTCCAATGTCGCCGCCGCCGTTAATGGCGTTGCCTTCTGCGGTACCCTCTCCGGTCAGCTCTTCTTCGGCTGGCTCGGTGACAAAATGGGTCGGAAACGAGTCTACGGCATGACCCTTATGCTTATGGTTATTTGCTCTGTTGCTTCCGGTCTGTCTTTCAGCAGCTCGCCGACGTCGGTGGTTGCCACTCTCTGCTTCTTCCGATTCTGGCTCGGGTTTGGCATCGGCGGCGATTACCCACTTTCCGCCACAATCATGTCGGAATACGCCAATAAAAGAACAAGGGGGGCATTCATCGCCGCCGTGTTTGCGATGCAGGGGTTTGGGATTTTGGCTGGTGGAGTGGTGGCTATAATTGTCTCCGCCGCTTTCGACGCCAAATACCCAGCGCCGTCGTACCAGGAAAATCCCAACGCCTCCACTGTCTCACAAGCGGATTACGTATGGCGAATCATTGTAATTTTTGGAGCTTTCCCAGCTCTCCTCACTTATTACTGGCGAATGAAAATGCCGGAAACCGCCCGTTACACCGCCTTGGTGGCTAAAAACGCCAAACAGGCGGCGGCGGACATGTCCAAAGTCCTGCAGGTGGAATTAGAATCCGAACAGGACAAAATCGAGGAAGGCAAATCGAAAAACGATTTTGGGTTGTTCTCAAAAAGCTTTCTTCGCCGGCACGGCCTTCACTTGCTCGGAACCACCTCCACCTGGTTCTTATTGGACATTGCATTCTACAGTCAAAATCTATTCCAAAAGGACATCTTCACCGCCATTGGATGGCTTCCTCCGGCGAAAACAATGAACGCCATTGAAGAAGTTTTCAAAATCGCCAGAGCACAGACTCTCATAGCATTATGCAGCACAGTTCCAGGGTATTGGTTCACGGTGGCATTGATCGACATAATGGGTCGATTTGCAATTCAATTAATGGGGTTTTTGTTCATGACGGTGTTCATGTTCGCATTGGCCATTCCTTACAACCACTGGACTCTGCCAGACCACAGAATTGGGTTCGTAGTGATGTATTCTCTCACGTTTTTCTTCGCGAATTTCGGGCCAAACGCGACGACATTCGTGGTACCGGCGGAGATTTTCCCAGCGAGGCTTCGATCAACCTGCCATGGAATATCTGCGGCGTCGGGAAAAGCAGGGGCGATCATCGGGGCGTTTGGGTTCCAGGCGGCGGAGAAGGCGTTTGGGGTAAAGAAGACGTTGATAATTCTGGGGGTGGTGAATGGTCTGGGGGCGTTGTTTACATTGTTGGTTCCTGAATCGAAGGGGAAGTCTTTGGAAGAGATTTCGGGGGAAGCGGGAGAAGAGGTTGAAAGGGAAACAGAGGCGAGGGCTGAATCTCGTAGAACTATGCCTGTTTGA 1731 51.82 MHVTWTLFPPLKYPSSIPISFRPSPPPPPPPPPPPQPHLPAKTQRLRFDLFGSMAGEPLKVLDALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHKQGSDKPGELPSNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSSPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKYPAPSYQENPNASTVSQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQDKIEEGKSKNDFGLFSKSFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMNAIEEVFKIARAQTLIALCSTVPGYWFTVALIDIMGRFAIQLMGFLFMTVFMFALAIPYNHWTLPDHRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIIGAFGFQAAEKAFGVKKTLIILGVVNGLGALFTLLVPESKGKSLEEISGEAGEEVERETEARAESRRTMPV 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8742265 8744488 - CmaCh06G013280.1 Cma06g01328 296882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g01328 576 TIGRFAM 2A0109: phosphate:H+ symporter 64 555 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cma06g01328 576 Gene3D MFS general substrate transporter like domains 73 570 IPR036259 -
Cma06g01328 576 MobiDBLite consensus disorder prediction 549 576 - -
Cma06g01328 576 SUPERFAMILY MFS general substrate transporter 58 553 IPR036259 -
Cma06g01328 576 MobiDBLite consensus disorder prediction 19 40 - -
Cma06g01328 576 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 57 566 - -
Cma06g01328 576 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 57 566 - -
Cma06g01328 576 Pfam Sugar (and other) transporter 78 553 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cma06g01328 576 ProSiteProfiles Major facilitator superfamily (MFS) profile. 77 546 IPR020846 GO:0022857
Cma06g01328 576 CDD MFS_PhT 78 545 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01328 Cma17g00166 CCT
Cma06g01328 Cma14g01810 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g01328 Cma-Chr6:8742265 Cma14g01811 Cma-Chr14:12987095 0 dispersed
Cma09g00027 Cma-Chr9:137993 Cma06g01328 Cma-Chr6:8742265 0 transposed
Cma16g00076 Cma-Chr16:329719 Cma06g01328 Cma-Chr6:8742265 0 transposed
Cma14g01810 Cma-Chr14:12979490 Cma06g01328 Cma-Chr6:8742265 0 wgd
Cma17g00166 Cma-Chr17:859051 Cma06g01328 Cma-Chr6:8742265 0 wgd
Cma19g00085 Cma-Chr19:510885 Cma06g01328 Cma-Chr6:8742265 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g01328 K08176 - csv:101209582 899.812