Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g01547 ATGTCAGTCTCCGGTGGTGTTTCGATTGCCCGAATCCGTGGGGAGAATCGGTTCTATCATCCACCTGCGATGCGGCGTCGTTTGCAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAACAACAGCAACAGCAACAGCAGCAGAAGAAAACTGCCTTGGATTCTGAGGTTGTTGCTACTACTGCGAGGATCGATGAGTTGGAGAAGAGTGAGGTCGTTGAGTGTCGTTCTTGGTCCACTCGCTCGGATTGCTCTGTTTCTGATCGTGGAGTTGCTGATTCTACTAATTTGGATCGGTTCTTGGAGTACACTACTCCCGTTGTTCCGGCTCAATATTTTTCTAAGACGAGCCTAAAGGGATGGAGAAATCGTGAAGTCTCAGAGGCACCTCCTTATTTTGTGCTCGGTGATCTCTGGGAATCTTTCAAGGAATGGAGTGCATATGGAGCGGGTATCCCTCTATTGTTAAATGGTAGCGACTCTGTAGTACAGTACTACGTTCCATATCTGTCAGGCATACAACTCTATGTGGATCCATCAAAATCCTCTGCCTTAAGTAGAAGGCGTGGTGCTGATATTGATGCTGAGTCCTCAAAGGAAACAACTAGTGATGAAAGCAGTAATTGTGGGATGGAAAAAAAAGCTAGTACGGTTCTTCAGGATGAGTGGATACAGGACTCCAGTGTTACTGGGTCACAGAGAGCGCTACAAATGAATGTACCCTCTGCCGAGTCATCAAGTGATGAAAGTGACTCTTGCTGCCGTCAAGGTCAGCTTGTGTTTGAATACATGGAGCTTGATCCACCATTTTGTCGTGAACCATTAACTGATAAGATCACTATCCTTGCATCTCGTTTTCCTGAATTGAAAACATATAGAAGCTGTGATTTATCTCCTTCCAGTTGGATATCTGTGGCATGGTATCCAATTTATAGGATTCCCACGGGTCCAACTCTACAAAGTCTAGATGCTTGCTTTTTGACCTTCCATTCTCTGTCTACAGCATTTCAAGGCATTAACTACAGTTGCCAACATTTGGACTTGCTTCCTACAAGTTTAAATTTTCGTTTTGGAATTCAACTGGTGTGGAGGAATGTCCAAAGGCTAACACATTGTGGCAAGATGCCGACAACTGGCTCAAGTCATTAA 1149 45.08 MSVSGGVSIARIRGENRFYHPPAMRRRLQQQQQQQQQQQQQQQQQQQQKKTALDSEVVATTARIDELEKSEVVECRSWSTRSDCSVSDRGVADSTNLDRFLEYTTPVVPAQYFSKTSLKGWRNREVSEAPPYFVLGDLWESFKEWSAYGAGIPLLLNGSDSVVQYYVPYLSGIQLYVDPSKSSALSRRRGADIDAESSKETTSDESSNCGMEKKASTVLQDEWIQDSSVTGSQRALQMNVPSAESSSDESDSCCRQGQLVFEYMELDPPFCREPLTDKITILASRFPELKTYRSCDLSPSSWISVAWYPIYRIPTGPTLQSLDACFLTFHSLSTAFQGINYSCQHLDLLPTSLNFRFGIQLVWRNVQRLTHCGKMPTTGSSH 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9691269 9694729 + CmaCh06G015470.1 Cma06g01547 297101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g01547 382 Coils Coil 25 50 - -
Cma06g01547 382 MobiDBLite consensus disorder prediction 25 54 - -
Cma06g01547 382 Pfam Protein of unknown function (DUF789) 95 342 IPR008507 -
Cma06g01547 382 MobiDBLite consensus disorder prediction 26 54 - -
Cma06g01547 382 MobiDBLite consensus disorder prediction 229 251 - -
Cma06g01547 382 MobiDBLite consensus disorder prediction 187 211 - -
Cma06g01547 382 PANTHER T15D22.8 4 343 - -
Cma06g01547 382 PANTHER OS07G0246600 PROTEIN 4 343 - -
Cma06g01547 382 MobiDBLite consensus disorder prediction 187 201 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g01547 Cma14g01602 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g01547 Cma-Chr6:9691269 Cma15g00927 Cma-Chr15:4880285 2.70E-90 dispersed
Cma14g01602 Cma-Chr14:12043159 Cma06g01547 Cma-Chr6:9691269 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g01547 - - cmax:111470860 630.172