Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma06g01623 | ATGAAATCTTCTCTTGCCCTCATTTTCAAACTCCCCGCCATTCTGTTCCCCAGATTCTCGATTATCCCCACCACCGCCATTTCCGCCACCATGTCCACTTCCGATCACTCTTCCCCCGCCTTTGACAGACCTCGCTCCGTCGTCAAGAAGGTTCTCGCTAAACTCCAGCACGAAGGCGATGGCGCCGTTGTTCGTCGAGGCATCGGAAGGAGCGATTTGAAGAATCTGGATCCATTTCTGATGCTCGATGATTTTTCCGTTAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACTTACATGTTACAGGGAGGAATTACTCATCAAGATTTTGCTGGCCACAAGGGTACGATCAGAACAGGTGATGTACAGTGGATGACAGCAGGAAGAGGTATTATCCATTCTGAAATGCCTGCTGGCGAAGGTCCTCAAAAGGGATTGCAGCTTTGGATCAATCTTGCAGCACATGACAAAATGATGGAACCAAAATATCAGGAGATTCTAAGCAACGACATTCCGAGAGCGGAGAACGACGGTGTCGAGGTTAACGTTATAGCAGGAGAGTCCATGGGAGTCCATTCTCCAATCTACACTCAAACGCCAACGATGTACCTCGACTTCACATTGAAACCAAAAGCTCAAGTGCATCAAAGCATCCCAGAGACATGGACTTCTTTCGTATACATAATCGACGGGGAAGGGGTATTCGGGTCGTTGAACTCGTCCCGGGTGGCGGCTCACCATGTCCTAGTGTTAGGACCGGGAGATGGGCTGAGTGTATGGAACAGATCTTCAAATCCATTGAGGTTTATTCTTGTAGCAGGGAAGCCACTGAATGAACCAATTGTTCAACATGGACCATTTGTGATGAACTCCCAATCTGAAATTGACCAAGCCATTGAGGACTACCACTATGCCAAAAATGGGTTTGAAATGGCAAAGCATTGGAGATCCCAGTGA | 978 | 48.36 | MKSSLALIFKLPAILFPRFSIIPTTAISATMSTSDHSSPAFDRPRSVVKKVLAKLQHEGDGAVVRRGIGRSDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGPQKGLQLWINLAAHDKMMEPKYQEILSNDIPRAENDGVEVNVIAGESMGVHSPIYTQTPTMYLDFTLKPKAQVHQSIPETWTSFVYIIDGEGVFGSLNSSRVAAHHVLVLGPGDGLSVWNRSSNPLRFILVAGKPLNEPIVQHGPFVMNSQSEIDQAIEDYHYAKNGFEMAKHWRSQ | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 10098128 | 10100118 | - | CmaCh06G016230.1 | Cma06g01623 | 297177 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma06g01623 | 325 | PANTHER | PIRIN-LIKE PROTEIN | 34 | 325 | - | - | |
Cma06g01623 | 325 | PANTHER | PIRIN-RELATED | 34 | 325 | IPR012093 | - | |
Cma06g01623 | 325 | CDD | cupin_pirin_C | 207 | 283 | - | - | |
Cma06g01623 | 325 | PIRSF | Pirin | 43 | 323 | IPR012093 | - | |
Cma06g01623 | 325 | Pfam | Pirin | 65 | 157 | IPR003829 | - | |
Cma06g01623 | 325 | Gene3D | Jelly Rolls | 58 | 310 | IPR014710 | - | |
Cma06g01623 | 325 | Gene3D | Jelly Rolls | 179 | 284 | IPR014710 | - | |
Cma06g01623 | 325 | CDD | cupin_pirin_N | 62 | 159 | - | - | |
Cma06g01623 | 325 | SUPERFAMILY | RmlC-like cupins | 45 | 323 | IPR011051 | - | |
Cma06g01623 | 325 | Pfam | Pirin C-terminal cupin domain | 210 | 314 | IPR008778 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma06g01623 | Cma14g01512 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma06g01623 | Cma-Chr6:10098128 | Cma16g00937 | Cma-Chr16:7193013 | 6.98E-139 | dispersed | |
Cma14g01512 | Cma-Chr14:11428180 | Cma06g01623 | Cma-Chr6:10098128 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma06g01623 | K06911 | - | csv:101205861 | 585.874 |