Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma06g01676 ATGGAGAAAACCCCACCCCCAGAAAAGTCTGAAAGTTTTTCAAAAAATTTCAATAGAAGGATTGCGAATTTGGGCTCACCTCGCCGGATTCCCGATGCCGCCGCTGATGCTAAATCAGAAGCTGAAAAGCATGCCGATCGTGAAGATGAAGCGTTCATTGAAGAGCCTCTTTCTGAATCAGAAACCGCTTTGATTCTCGAAGAGGTTGATCGATTCCTTGCGAATTCGTCCGATGCTAGAGATGACGGATCGAATCTCATGGTTGAAATTCCGAGCTCCGTTCTTTCCTTGTGCAAAATGGTGGACTCGATGACCTCCAGGTTCTATTCTACCAAAATTCCGGCGAAGCTCGGTAGCGATCCTGACCTAGATTCTTTGTTTTTCGAAGCTCTAAATCGCATTTCGAAGGTTGCGATTAAATTAAGCGAATTCCCTTCGACCACTGCCTCCATTCCTTCGCTCAATCGAACCACCACGTCTCTACAGCGAGCCATGTCGCTATTGGACGAAGAATTCAATGCGCTTCTGAAAGAATGCAAACATCGAGAGTCCGATTCGAAATTTGATAAGAAAGCGTTGAAGCAATCGTCGTTCAAATCAAGCAACGAATCGACAGATCAACATCACAGCGCCGTTCCTGAATCATCCGACCCAGATTCTACCAAGGAGGAAGAATTTCCCTCTTTCTCGCTGGAAACTATATCGAAAATGAAAAGAATCGCCGAAACGATGATCTGCGCCGGCTACGAGAAGGAATGTTGTTTGAGCTACAGCTTGCTCCGGCAGAGCTCGTTCAAAGGAATACTGAACAAGTACGGCTACGAAAATATTAGCATAGACGACATACAGAAAATGCAATGGGAGATTCTTCAATCGGAAATCGACAAATGGATGGCCGTCGTCAATAAATGCTCAAGTTCCTTGTTCCCAGGCGAGTGGAAGTTCTGCGACGCTGTTTTCGCCGATCATCCCTTCATTGCTCATACGCTCTTCAGCGGTTTAACAAGAGGAATAGTCATCAAGCTTCTCAACTTCGCAAATGCGGTGGTTCTAACAAAGCGATCGGCGGAGAAGATGTTCAAATTACTCGACATGTACGAGACCCTCCGCGATTTGATTCCGGCATTCAATGGCTTCCCTGAAAATTGCAGAACGGAGCTAATTTCAGAAGCGGAAGGGGCAAAACGCGGAATAGGCGAAGCAATAGTCGGGATTTTCTACGACCTAGAAAGCTCAATCAAAAGCGACAACGCGAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTGACGCGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTCCTTCAATTCCTCGACCCTAAAGTCGAAGAAAATCGACCGGCAATAATCGACGAAAACGACGATGAATCCCCGAGAAAGTCTCAGCTCGCGTATCAGGTGACGATGGTGATGGATCTGCTGGACGCGAACCTCGCGATGAGATCGAAATTGTACCGCGACGCATCTCTTCGGTACATCTTCCTGATGAACAACGGAAGGTACATATTTCAGAAAATCAAAGGCTCAAGTGGAATAACGGAATTGATGGGAGACCGCTGGTGCCGGAAACGATCGACGAATCTGCGACGGTACCACAAAAATTACCAGCGAGAAACATGGAGTAAGGTGCTGCAATGCCTGAACCACGAAGGATTGCAGGTGAACGGGAAGGTATCGAAGCCGATATTGAAGGAGAGATTCAAAAGCTTCAACGCGATGTTCGACGAAATACACAAAACGCAGAGCAGTTGGGTGGTGAGCGACGACCAGCTTCAATCGGAGCTTCGGATTTCAGTGTCGGCGGTGATGATTCCGGCATACCGTTCGTTCGTGGGGAGATTCAAGCAGTATTTCGATCCGGGAAGACAATCGGAGAAGTACATAAAGTATCAGCCGGAAGATATTGAAGGCTTGATCGAGGACCTGTTTGATGGCAATACTGCCTCTATGTCGAGAAGGAGAACGTAG 2019 46.9 MEKTPPPEKSESFSKNFNRRIANLGSPRRIPDAAADAKSEAEKHADREDEAFIEEPLSESETALILEEVDRFLANSSDARDDGSNLMVEIPSSVLSLCKMVDSMTSRFYSTKIPAKLGSDPDLDSLFFEALNRISKVAIKLSEFPSTTASIPSLNRTTTSLQRAMSLLDEEFNALLKECKHRESDSKFDKKALKQSSFKSSNESTDQHHSAVPESSDPDSTKEEEFPSFSLETISKMKRIAETMICAGYEKECCLSYSLLRQSSFKGILNKYGYENISIDDIQKMQWEILQSEIDKWMAVVNKCSSSLFPGEWKFCDAVFADHPFIAHTLFSGLTRGIVIKLLNFANAVVLTKRSAEKMFKLLDMYETLRDLIPAFNGFPENCRTELISEAEGAKRGIGEAIVGIFYDLESSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVLQFLDPKVEENRPAIIDENDDESPRKSQLAYQVTMVMDLLDANLAMRSKLYRDASLRYIFLMNNGRYIFQKIKGSSGITELMGDRWCRKRSTNLRRYHKNYQRETWSKVLQCLNHEGLQVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDDQLQSELRISVSAVMIPAYRSFVGRFKQYFDPGRQSEKYIKYQPEDIEGLIEDLFDGNTASMSRRRT 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10336286 10338304 + CmaCh06G016760.1 Cma06g01676 297230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma06g01676 672 MobiDBLite consensus disorder prediction 33 51 - -
Cma06g01676 672 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 671 IPR004140 GO:0000145|GO:0006887
Cma06g01676 672 MobiDBLite consensus disorder prediction 1 15 - -
Cma06g01676 672 SUPERFAMILY Cullin repeat-like 127 661 IPR016159 -
Cma06g01676 672 MobiDBLite consensus disorder prediction 197 226 - -
Cma06g01676 672 MobiDBLite consensus disorder prediction 210 226 - -
Cma06g01676 672 MobiDBLite consensus disorder prediction 1 55 - -
Cma06g01676 672 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 57 671 - -
Cma06g01676 672 Gene3D Exocyst complex component Exo70 108 670 - -
Cma06g01676 672 Pfam Exo70 exocyst complex subunit 296 658 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02280 Cma-Chr4:15904894 Cma06g01676 Cma-Chr6:10336286 0 dispersed
Cma06g01676 Cma-Chr6:10336286 Cma15g00757 Cma-Chr15:3697182 0 dispersed
Cma14g01446 Cma-Chr14:11058970 Cma06g01676 Cma-Chr6:10336286 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma06g01676 K07195 - csv:101220402 1110.9