Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00132 ATGTCAGATGAAATGTTTAGAGATCTATTTTTCTCGAACCCTTTTCGAGACGGTGGGTTCGGGGACTCGGAAACAGCCAGGAATTTTGGGGTGTCGAATGAAATTTCGGGGACTCCGATGAATTCTTGTGGGTCGTTGTCGTCTTCAGATGCTGGAGCTGAGGAAGATGGTTCTGGGAAAGAGAAGGAGAAGGCGATGAAAGACATGGAAGATGGTGGAGAGAGTTCCAAAGCTGCAGGTAAAGCTAAGAAGAAAGAGAGAGAGCCCAGATTTGCTTTTATGACGAAGACCCAGATCGATCATCTTGAAGATGGATATCGATGGAGAAAATATGGACAGAAGACTGTCAAGAACAGTGTTTTTCCTAGGAGCTATTACAGATGTACAACTCCCAACTGTGGAGTGAAGAAACGTGTAGAAAGATCGTTTCAAGATCCATCCATTGTAATCACGACGTACGAAGGACAACACAACCACCCAATTGCGGCAACGCTGAGAGGAAATCTGTCGGCGGCTGCCGCATTTCCACAGTCCATGTTGGAACCAATGCCGGTGGTCGGTGGCGCTGGGTTTCTTCCGAAACCGTTGAGCGACCCTTCCGGCAACAGTCAGGTTGTCGGCGGTGGCGGTGGCGGCTACGTCTATTCACAGAGCAGCTTCGGGTATCCTTACAACGAGCAGCAATCCGAATATGAGGTTTTGCAGGACATTTTTCCATCTCCGTCGTCGTTCTTCAACCGGCAGTCGTGA 750 48.93 MSDEMFRDLFFSNPFRDGGFGDSETARNFGVSNEISGTPMNSCGSLSSSDAGAEEDGSGKEKEKAMKDMEDGGESSKAAGKAKKKEREPRFAFMTKTQIDHLEDGYRWRKYGQKTVKNSVFPRSYYRCTTPNCGVKKRVERSFQDPSIVITTYEGQHNHPIAATLRGNLSAAAAFPQSMLEPMPVVGGAGFLPKPLSDPSGNSQVVGGGGGGYVYSQSSFGYPYNEQQSEYEVLQDIFPSPSSFFNRQS 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 683658 685147 - CmaCh07G001320.1 Cma07g00132 297447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00132 249 MobiDBLite consensus disorder prediction 26 52 - -
Cma07g00132 249 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma07g00132 249 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 30 241 IPR044810 GO:0003700
Cma07g00132 249 PANTHER WRKY TRANSCRIPTION FACTOR 81 30 241 - -
Cma07g00132 249 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma07g00132 249 MobiDBLite consensus disorder prediction 12 89 - -
Cma07g00132 249 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma07g00132 249 MobiDBLite consensus disorder prediction 54 89 - -
Cma07g00132 249 Gene3D WRKY domain 86 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cma07g00132 249 SUPERFAMILY WRKY DNA-binding domain 94 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g01378 Cma07g00132 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00132 Cma-Chr7:683658 Cma19g01082 Cma-Chr19:9010129 3.39E-50 dispersed
Cma03g01378 Cma-Chr3:8745541 Cma07g00132 Cma-Chr7:683658 4.77E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
35322 PF03106 WRKY 3.10E-26 CL0274 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00132 - - mcha:111012424 288.885