Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00218 ATGGCGTCGCAGTTGCTCTCACGCGCCACTTACTTCGCTGGCGGCATTCCCAGTCTCCGCAAGTTGCACAGAGATTCCACCACCACCAACAACCACGTCGCCTTCGTCCACACCAGGCCCATCGCCGAGGGAGCCAACTTGATTTGGGGACGCCAATTGCGACCGTCTCTGCTTCTTGATAACCTCTCGGCCAAACGGGAGACAGTTCGGCCTACCTATGCCGCAGCCTCCTCTTCTCCCGCGGGAGGTAGCGATTCTGCCGGGGAGGCGAAAGTTACCCCGGCTGGTTTCTTCGAGAAGTATCCGGCGTTGGTCACCGGATTCTTCTTCTTCATGTGGTACTTTTTGAACGTGATTTTCAATATCCTCAACAAGAAGATCTATAATTACTTCCCCTATCCTTATTTTGTATCCGTGATCCATTTGTTGGTTGGGGTGGTGTACTGCTTGATAAGCTGGGTTGTGGGTCTCCCCAAGCGAGCGCCTATTGACTCAACACTCCTGAAGCTGCTGATCCCTGTAGCTTTCTGTCATGCACTCGGCCACGTCACTAGCAATGTCTCATTCGCAGCTGTTGCTGTCTCATTCACACACACAATCAAAGCTTTGGAACCGTTCTTTAACGCCGCCGCTTCTCAATTCATTTTGGGGCAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCATTGGTGTGTCAATTGCATCTTTGACTGAGCTTTCATTCAACTGGACTGGCTTCATTAGTGCTATGATTTCTAATATCTCATTTACCTACAGAAGTATTTATTCAAAGAAAGCCATGACTGACATGGACAGCACCAACGTCTATGCCTATATTTCTATCATCGCTCTCCTTTTCTGCATTCCACCAGCTGTAATTGTGGAGGGGCCTCAACTGCTGAAGTTCGGTTTCAATGATGCCATAGCTAAAGTTGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTGGGAATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACACTGGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTGTCTTTGGTAACAAAATTTCAACACAGACTGGTATTGGAACCTGCATTGCAATAGCAGGAGTTGCACTTTACTCTTTCATCAAGGCTAAGATGGAAGAAGAGAAACGAGGTTTGGGTGTTCTTCTGTGTTTTCTTCTGTTCTTTTCTCCGATCTTCACCTTCTAA 1266 47.39 MASQLLSRATYFAGGIPSLRKLHRDSTTTNNHVAFVHTRPIAEGANLIWGRQLRPSLLLDNLSAKRETVRPTYAAASSSPAGGSDSAGEAKVTPAGFFEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLISWVVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSIASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSFIKAKMEEEKRGLGVLLCFLLFFSPIFTF 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1012179 1016565 + CmaCh07G002180.1 Cma07g00218 297533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00218 421 Pfam Triose-phosphate Transporter family 105 392 IPR004853 -
Cma07g00218 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 241 - -
Cma07g00218 421 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 402 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cma07g00218 421 PANTHER BNAC02G47130D PROTEIN 41 405 - -
Cma07g00218 421 PANTHER SOLUTE CARRIER FAMILY 35 41 405 - -
Cma07g00218 421 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 393 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g01289 Cma07g00218 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01142 Cma-Chr1:8353848 Cma07g00218 Cma-Chr7:1012179 5.34E-78 dispersed
Cma07g00218 Cma-Chr7:1012179 Cma07g00303 Cma-Chr7:1339664 1.24E-78 dispersed
Cma13g00885 Cma-Chr13:7158062 Cma07g00218 Cma-Chr7:1012179 2.17E-64 dispersed
Cma18g01109 Cma-Chr18:9049595 Cma07g00218 Cma-Chr7:1012179 0 transposed
Cma03g01289 Cma-Chr3:8369310 Cma07g00218 Cma-Chr7:1012179 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00218 K15283 - csv:101220728 739.954