Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma07g00291 | ATGGCGGAGGATTTTCAGGCTGCTATTTGCGGCGATAATTGGTGGAGCTTTTCACGAAACATGATGGTCACCGTCGGTGGCTTATCGCCCTGTTCCGTCGGGATTGGCGACCTAGGTTGGCCGCCGGCTGATGATTTCCTCGACATCAAGCCCAAGTCCGCAACTGATTCCGACCACAACAACAACTCCATGCTTTTTCAAGATTATTCCACCTTCCAAATGATGGGTTTTGCTCTTTCTTCTTCCACCACCTCCGATCATTGGAACCAACCTGATGGTTTACTTTGCGGCGGTGGGCGAGGTGAGAGCAACTTCAATTCGAATGGAATTGAGAGGTACAAAGATGAGGAAATTACAAGGAGTTTCACGTCTGATTCGAGCTTCATAAACGGATTGAAGCAAGGAGATGATGAAGATTACAACATGTTGGAGCAAAATGGTTTGATGTCTACAACTAACACACCCACTTGCCAGGGTTTGTTTCCTCTTGACTCAACTTTATATGGATACCCTCATCAACAACAACAACAACAACAACCACCACCACCACATGCCCATTCCCTTTTCAACTCAACCCACCCTCAGCCTCAGCCTGTTTCTGCCGCCTTGCACTTCGCCAATAACACTCCCTTTTGGAACGCCCCAACCGCAGCTTCTTCTACTCACATTCCACAGGGCATTGCTTCCTTACTTGAACAAAAGAGCGCCAAATCCCAAAATAGTTTGAAGCCTATCAATAATGGTAATTGTGAAAATGGTCAAGAACCCAAGAAAGGTGACAAAAACAGCGCAAATGAATCAGTGCCAGTGTTCAAAAGGCCTCGAATTGAAACTCCATCACCATTGCCGACATTTAAGGTGCGGAAAGAGAAGCTAGGGGACCGTGTCACTGCGCTTCAACAACTGGTTTCACCGTTTGGAAAGACCGATACTGCCTCAGTTCTTCACGAAGCCATTGAGTACATCAAGTTCCTCCACGATCAAGTCTTAAGCACTCCATATATGAAGAGCAACAATGGAATAACACCCACCCAACAACACCAACAGGTATGTGAAAAGGAAGACCCAGATTGCCCAAAACAAGATCTGAGAAGCCGAGGGCTTTGCTTGGTGCCGGTTTCAAGCACATTTCCAGTGTCCAATGTAGGCACGGCGGATTTCTGGACTCCGACGTTCGGCGGAACATTCCGAGTAGTGGTAGAGTATTGGGAAGAACAGGAACAAGTGCTAAATTCAGGTAAAGTACTCAACGACACAGACAGGGCAGCGTAA | 1272 | 47.09 | MAEDFQAAICGDNWWSFSRNMMVTVGGLSPCSVGIGDLGWPPADDFLDIKPKSATDSDHNNNSMLFQDYSTFQMMGFALSSSTTSDHWNQPDGLLCGGGRGESNFNSNGIERYKDEEITRSFTSDSSFINGLKQGDDEDYNMLEQNGLMSTTNTPTCQGLFPLDSTLYGYPHQQQQQQQPPPPHAHSLFNSTHPQPQPVSAALHFANNTPFWNAPTAASSTHIPQGIASLLEQKSAKSQNSLKPINNGNCENGQEPKKGDKNSANESVPVFKRPRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVLSTPYMKSNNGITPTQQHQQVCEKEDPDCPKQDLRSRGLCLVPVSSTFPVSNVGTADFWTPTFGGTFRVVVEYWEEQEQVLNSGKVLNDTDRAA | 423 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1294348 | 1296360 | - | CmaCh07G002910.1 | Cma07g00291 | 297606 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma07g00291 | 423 | Gene3D | - | 286 | 350 | IPR036638 | GO:0046983 | |
Cma07g00291 | 423 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 276 | 325 | IPR011598 | GO:0046983 | |
Cma07g00291 | 423 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 286 | 330 | IPR036638 | GO:0046983 | |
Cma07g00291 | 423 | MobiDBLite | consensus disorder prediction | 235 | 282 | - | - | |
Cma07g00291 | 423 | MobiDBLite | consensus disorder prediction | 168 | 199 | - | - | |
Cma07g00291 | 423 | CDD | bHLH_AtbHLH_like | 282 | 329 | IPR045239 | - | |
Cma07g00291 | 423 | MobiDBLite | consensus disorder prediction | 164 | 199 | - | - | |
Cma07g00291 | 423 | MobiDBLite | consensus disorder prediction | 235 | 253 | - | - | |
Cma07g00291 | 423 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 53 | 382 | - | - | |
Cma07g00291 | 423 | PANTHER | TRANSCRIPTION FACTOR BHLH103 | 53 | 382 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g00929 | Cma-Chr4:4795265 | Cma07g00291 | Cma-Chr7:1294348 | 3.15E-60 | dispersed | |
Cma07g00291 | Cma-Chr7:1294348 | Cma16g00839 | Cma-Chr16:4812754 | 1.59E-52 | dispersed | |
Cma13g00697 | Cma-Chr13:6338777 | Cma07g00291 | Cma-Chr7:1294348 | 5.21E-48 | wgd | |
Cma03g00508 | Cma-Chr3:4950547 | Cma07g00291 | Cma-Chr7:1294348 | 6.21E-144 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma07g00291 | - | - | bhj:120072732 | 482.256 |