Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00303 ATGATCTCTTCACTCAGCCTCACATCTTCTACTTTCGCTTCCTCTGAACTTCTCAACCGAAAATCTCCGATTCCCAGGCTGAATCTTCCGGCGCAGTTTCCGAATCGCAGTGCCCTCAAACATCTCGATCGATCTCTTTCTACCAACAAACCACTTCACATCTCATCCGTTGATAATCTTTCTTTGCCCCTAAAATCGTTTGAGCGTTCGACGGAATGCAGGGCGTACGAGGCCGATTCGCGGCGTTTGCAGATTAACGTTGAACTTCCTGAAGAACAGGCAGCTCAGAAACTAAAAATTGGGCTGTATTTCGCCACTTGGTGGGCTTTGAATGTGGTGTTCAATGTATACAACAAGAAAGTTCTTAATGCGTTCCCTTATCCATGGCTCACCTCCACTCTCTCCCTCGCCGCTGGATCGCTTATGATGCTCGTTTCTTGGGCCACTAGAATGGTCGACGCTCCCAAAACCGATTTGGATTTCTGGAAATCCCTATTGCCGGTGGCGGTGGCGCATACTATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTGGCTGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCGGCTTTCAGTGTGTTGGTCTCCAGGTTTCTGTTGGGCGAGATGTTTCCATTGCCTGTTTACTTATCTCTTATCCCTATCATTGGAGGCTGCGCTCTTTCTGCACTAACTGAGCTCAATTTCAACATGACTGGATTCATGGGAGCGATGATATCGAACTTGGCATTTGTGTTTAGAAACATATTCTCAAAGAAAGGGATGAAGGGGAAGTCAGTGAGTGGGATGAATTACTATTCTTGCCTTTCAATGCAGTCTCTGCTCATTCTTACTCCTTTCGCCATTGCTGTGGAGGGACCCAAGTTGTGGGCCGAAGGATTTCAACAGGCTCTCTCTCAAATTGGTCCCAATTTCATTTGGTGGTTGGTAGCTCAAAGTATGTTCTACCACTTGTACAATCAAGTGTCATACATGTCTCTTTATCAGATATCTCCATTGACATTCAGTGTAGGGAACACAATGAAGAGAATATTCGTAATAGTGTCGTCCATTATCGTCTTCCGCACGCCTGTCCGACCCATCAACACCATTGGAGCTGCCATTGCAATCCTTGGAACCTTCCTCTACTCGCAGGCCAAGCTGTGA 1176 46.77 MISSLSLTSSTFASSELLNRKSPIPRLNLPAQFPNRSALKHLDRSLSTNKPLHISSVDNLSLPLKSFERSTECRAYEADSRRLQINVELPEEQAAQKLKIGLYFATWWALNVVFNVYNKKVLNAFPYPWLTSTLSLAAGSLMMLVSWATRMVDAPKTDLDFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLPVYLSLIPIIGGCALSALTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYSCLSMQSLLILTPFAIAVEGPKLWAEGFQQALSQIGPNFIWWLVAQSMFYHLYNQVSYMSLYQISPLTFSVGNTMKRIFVIVSSIIVFRTPVRPINTIGAAIAILGTFLYSQAKL 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1339664 1341811 + CmaCh07G003030.1 Cma07g00303 297618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00303 391 PANTHER SOLUTE CARRIER FAMILY 35 35 390 - -
Cma07g00303 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 291 388 - -
Cma07g00303 391 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 98 390 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cma07g00303 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 235 - -
Cma07g00303 391 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 35 390 - -
Cma07g00303 391 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02695 Cma-Chr4:18244050 Cma07g00303 Cma-Chr7:1339664 1.40E-76 dispersed
Cma07g00218 Cma-Chr7:1012179 Cma07g00303 Cma-Chr7:1339664 1.24E-78 dispersed
Cma07g00303 Cma-Chr7:1339664 Cma16g00853 Cma-Chr16:5052238 0 dispersed
Cma01g01142 Cma-Chr1:8353848 Cma07g00303 Cma-Chr7:1339664 0 wgd
Cma03g00528 Cma-Chr3:5032836 Cma07g00303 Cma-Chr7:1339664 0 wgd
Cma07g00303 Cma-Chr7:1339664 Cma09g00938 Cma-Chr9:4699608 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00303 K15283 - csv:101216621 644.81