Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00379 ATGTTGCTGGTTTATTACCTGTGTTTGAGTTTCTTGTGGGGAAAATCGTTGGCGGCTCCTGCCGGCGGCGATGGCACCACGAGGGAGCTTGATCAGACTCCGACATGGGCTGTTGCCGGTGTTTGTGCTGTTATCATCATTATTTCTATCACCTTGGAGAAACTCCTTCATAAAGCTGGAACGTGGCTTACAGATAAGCATAAGAGAGCTCTTTATGAAGCTCTGGAGAAGGTTAAAGCTGAGCTGATGATTCTGGGTTTCATTTCACTGCTCCTCACCTTTGGCCAGAGCTATATCATTAAAATCTGCATTCCCACAGGGGTTGCAAACACTATGTTACCGTGTGCAGCAGCTAAGGATGACAAAATGGAAAAGGACGCTGGCGGAGCCGATGAAGGCGAGCACCATCGACGTCTTCTATGGGTAGAACGGAGGTTCCTGGCTGCTGTTGGCCCTGTTAGTTGCAAGGATGATCATGTGCCGCTTATATCTATCTCAGGATTGCATCAGCTGCACTTGTTTATCTTCTTCTTAGCTGTATTTCATGTAGTATACAGCGCCATCACAATGATGCTTGGGAGACTAAAGATTCGAGGTTGGAAGGCATGGGAGGAGGAGACCTCAACTCACAATTATGAGTTCTCAAATGATAATGCACGATTCAGGCTTACTCACGAAACATCATTTGTGAGAGCCCACACGAGCTTTTGGGCAAAACTTCCTGTCTTTTTTTATATTGGATGCTTCTTCCGACAATTTTTCAGGTCCGTTGGTAAGGCTGACTACTTGGCATTACGCAATGGATTCATCGCCGTTCATCTAGCTCCGGGAAGTAAGTTTGACTTCCAAAAATATATTAAAAGGTCCTTAGAAGATGACTACAAGATTATTGTGGGAGTGAGTCCCGTGCTTTGGGCCTCGTTCGTCGTCTTCTTACTTATAAACGTTTATGGATGGCAGGCATTGTTTTGGACATCCTTAATTCCTGTGATTATAATCCTGGCTGTTGGAACAAAGCTTCAGGGAGTTATGACAAAAATGGCTCTTGAAATTACAGAAAGACATGCTGTTGTCCAAGGAATTCCTCTTGTTCAGGCATCAGATAAATATTTTTGGTTTGGCAAGCCTCAGCTGGTTCTTTATCTCATCCACTTCGCTTTATTTTCGAATGCATTCCAAATAACGTATTTCTTCTGGATTTGGTATTCGTTCGGGCTAAAATCCTGCTTCCATACTGATTTCAAGCTCGCAATTATAAAGATCGGTCTTGGGGTTGGTGTTCTCTGTCTTTGCAGCTACATTACTCTTCCACTATATGCTCTTGTGACTCAGATGGGCACACGTATGAAGAAGTCAATCTTTGATGAACAAACATCAAAGGCACTCAAAAAGTGGCGCATGGCTGTTAAGAAGAAGCAAGGAAAGTCCCCGACTCGAAAACTAGGTAGCCCGAGCGCTTCGCCGATGCATTCATCATCAGGATACACATTGCATCGATTCAAGACCACAGGTCACTCAAACGGATCATCCATGTACGACGAGAACGAGGCATCGGATAACGAAGTAGATCCGGTGTCGCCTAAAGCACCTGCTGCAAATTTTACAGTTAGAGTAGATGCTCATGATGAACATGAGAAGGAAATAATGGAATCCCAGCATTCAGAAAGAAGGAATGAAGATGATTTCTCATTTGCCAAACCTGCACCCACCAAAGGCTCTGCTTAA 1725 44.29 MLLVYYLCLSFLWGKSLAAPAGGDGTTRELDQTPTWAVAGVCAVIIIISITLEKLLHKAGTWLTDKHKRALYEALEKVKAELMILGFISLLLTFGQSYIIKICIPTGVANTMLPCAAAKDDKMEKDAGGADEGEHHRRLLWVERRFLAAVGPVSCKDDHVPLISISGLHQLHLFIFFLAVFHVVYSAITMMLGRLKIRGWKAWEEETSTHNYEFSNDNARFRLTHETSFVRAHTSFWAKLPVFFYIGCFFRQFFRSVGKADYLALRNGFIAVHLAPGSKFDFQKYIKRSLEDDYKIIVGVSPVLWASFVVFLLINVYGWQALFWTSLIPVIIILAVGTKLQGVMTKMALEITERHAVVQGIPLVQASDKYFWFGKPQLVLYLIHFALFSNAFQITYFFWIWYSFGLKSCFHTDFKLAIIKIGLGVGVLCLCSYITLPLYALVTQMGTRMKKSIFDEQTSKALKKWRMAVKKKQGKSPTRKLGSPSASPMHSSSGYTLHRFKTTGHSNGSSMYDENEASDNEVDPVSPKAPAANFTVRVDAHDEHEKEIMESQHSERRNEDDFSFAKPAPTKGSA 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1625474 1630062 - CmaCh07G003790.1 Cma07g00379 297694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00379 574 PANTHER MLO-LIKE PROTEIN 20 563 - -
Cma07g00379 574 Pfam Mlo family 28 492 IPR004326 GO:0006952|GO:0016021
Cma07g00379 574 PANTHER MLO-LIKE PROTEIN 1 20 563 IPR004326 GO:0006952|GO:0016021
Cma07g00379 574 MobiDBLite consensus disorder prediction 537 564 - -
Cma07g00379 574 MobiDBLite consensus disorder prediction 468 574 - -
Cma07g00379 574 MobiDBLite consensus disorder prediction 478 515 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g01297 Cma07g00379 CST
Cma03g00619 Cma07g00379 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00968 Cma-Chr5:7813496 Cma07g00379 Cma-Chr7:1625474 0 dispersed
Cma06g00168 Cma-Chr6:831182 Cma07g00379 Cma-Chr7:1625474 0 dispersed
Cma07g00379 Cma-Chr7:1625474 Cma20g00477 Cma-Chr20:2307515 5.41E-177 dispersed
Cma03g00619 Cma-Chr3:5399530 Cma07g00379 Cma-Chr7:1625474 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00379 K08472 - csv:101212923 995.342