Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00408 ATGGCTTCCTTTGCTGTGGCATTCTCACACTTTGCATTCCTTTTGCTGTCTGTTGTGTCATTGGGGAGTTCGCTGAGCTTAGACTACTACGACAAGACGTGTCCCAGTGCCGACTTCATTGTTTCTAAAGCTGTCAGGAATGCAGCTTACAAAGATAAGACTGTCCCTGCTGCACTCCTCCGAATGCACTTTCATGACTGCTTTATAAGGGGTTGTGATGCATCTGTATTGCTGAACTCAGTAGGGAACAACAAAGCAGAGAAAGATGGGCCCGCTAATTTATCTTTGCACTCATTTTTTGTGATCGACGACGCGAAGAAAGAACTTGAATCCTATTGCCCTGGTGTTGTCTCTTGTGCTGATATCTTGGCTATGGCGGCAAGGGATGCGGTTGTGCTGTCTGGAGGTCCAACATGGGATGTTCCTAAAGGAAGAAAGGATGGAAGGGTATCAAAGGCAAGCGAAACAATACAATTGCCATCTCCAGCCTTCAACATTTCTCAGCTGCAACAAAGCTTCTCCCAAAGGGGACTATCCTTGGACGACCTAGTTGCTCTGTCAGGAGCACACACCTTAGGATTTGCTCATTGCTCATCCTTTGAAGGTAGAATCCGCAACTTCAGTCCAGCCAGCAATGTTGACCCTGCAATGAATCCATCGTTTGCAGGAAGTCTAAGAAACATGTGCCCAGTAAACAACAAGGCAAAAAATGCGGGCGCTAACATGGATACTTCTCCAACCACATTCGACAACAATTACTATAGACTGATACTCCAAAAGAAGGGCCTGTTTTCTGCTGATCAAGCTCTGCTCAACTTTCCCAAGACCAAGAATCTTGTTAATGAGTTTGCTAGCTCAAAGGAAGCTTTTACCAGAGCATTTGTTAATTCCATGATCAAGATGAGTAGCATCACTGGAGGACAGGAGATCAGAAAGAATTGTAGGGCAGTGAACTAA 957 45.25 MASFAVAFSHFAFLLLSVVSLGSSLSLDYYDKTCPSADFIVSKAVRNAAYKDKTVPAALLRMHFHDCFIRGCDASVLLNSVGNNKAEKDGPANLSLHSFFVIDDAKKELESYCPGVVSCADILAMAARDAVVLSGGPTWDVPKGRKDGRVSKASETIQLPSPAFNISQLQQSFSQRGLSLDDLVALSGAHTLGFAHCSSFEGRIRNFSPASNVDPAMNPSFAGSLRNMCPVNNKAKNAGANMDTSPTTFDNNYYRLILQKKGLFSADQALLNFPKTKNLVNEFASSKEAFTRAFVNSMIKMSSITGGQEIRKNCRAVN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1767659 1769291 + CmaCh07G004080.1 Cma07g00408 297723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00408 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cma07g00408 318 Gene3D Peroxidase, domain 2 160 301 - -
Cma07g00408 318 PANTHER PEROXIDASE 25-RELATED 10 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 CDD secretory_peroxidase 28 317 IPR033905 GO:0004601|GO:0042744
Cma07g00408 318 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PANTHER PEROXIDASE 10 317 - -
Cma07g00408 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 Gene3D - 28 318 - -
Cma07g00408 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00408 318 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01679 Cma-Chr1:11455528 Cma07g00408 Cma-Chr7:1767659 1.11E-78 dispersed
Cma07g00408 Cma-Chr7:1767659 Cma18g01214 Cma-Chr18:9599503 1.94E-120 dispersed
Cma12g00394 Cma-Chr12:2033702 Cma07g00408 Cma-Chr7:1767659 2.65E-149 wgd
Cma03g00661 Cma-Chr3:5545692 Cma07g00408 Cma-Chr7:1767659 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00408 K00430 - csv:101217954 555.829