Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00508 ATGCCTGAAGAAGCCATGACAGGTAGAGCGTCATCGGGAAGGACGCCGACGTGGAAGGAAAGGGAGAACAATAAGAGGAGGGAGAGACGGCGGAGGGCTATTGCTGCTAAGATCTACACTGGTCTCAGAACTCAGGGGAACTATAAGCTTCCTAAGCACTGTGACAACAACGAGGTCTTGAAGGCGCTTTGTAGTGAAGCTGGTTGGGTGGTTGAAGAAGATGGCACCACCTATCGCAAGGGATGCAACCCTCCTCCGATTGATATTGGCACTTCTGCTAACATGAGTGCCTGTTCTTCTCTTCAACCAAGCCCACAATCTTCATGTTTCCCAAGTCCTGTACCATCCTACCATGCCAGCCCTTCTTCATCCTCTTTTCCGAGCCCAACTCGATTTGATGGGAATCCATCTTATCTTTTGCCATTCCTTCAAAATATAACCTCTATACCTGCTAATCTCGCACCTCTCAGAATATCAAACAGTGCACCTGTTACGCCACCTCTTTCTTCCCCGACATCGAGGGGTTCGAAGCGTAAACCTGACTGGGAGTCCATTCCAAATAGCTACTTGACCTCTTTCCGCCACCCCCTCTACGCTGTCTCTGCTCCTTCAAGTCCTACAAGATGCCGCCATCTTACACCAGCAACAATTCCAGAATGTGATGAGTCTGATGCTTCAACTGTGGACTCTGGCCGCTGGGTCAGTTTCCAAACTGTAGCACCTTCTGTTGCTCCTCCCTCCCCTACATTTAATCTGATGAAACCAGTGAGCCAGCAAAACTCTCTCCACGATTCAGTTGACAGACATGGAGCAATGGGCTGGGGTGCTGCATCGGACAGGGGGCGAGGCTCTGAGTTTGAATTCAAAAAATTTGAGAATGGCAAAGTGAAGCCATGGGAGGGCGAGAGAATTCATGAAGTTGGGGTGGACGATTTGGAGCTTACACTTGGGAGTGGGAAGGCCCGTGGTTAA 972 50.0 MPEEAMTGRASSGRTPTWKERENNKRRERRRRAIAAKIYTGLRTQGNYKLPKHCDNNEVLKALCSEAGWVVEEDGTTYRKGCNPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSYLLPFLQNITSIPANLAPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYLTSFRHPLYAVSAPSSPTRCRHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLHDSVDRHGAMGWGAASDRGRGSEFEFKKFENGKVKPWEGERIHEVGVDDLELTLGSGKARG 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2196728 2199203 - CmaCh07G005080.1 Cma07g00508 297823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00508 323 MobiDBLite consensus disorder prediction 1 30 - -
Cma07g00508 323 Pfam BES1/BZR1 plant transcription factor, N-terminal 11 133 IPR008540 -
Cma07g00508 323 MobiDBLite consensus disorder prediction 15 29 - -
Cma07g00508 323 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 6 322 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cma07g00508 323 MobiDBLite consensus disorder prediction 160 175 - -
Cma07g00508 323 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 6 322 - -
Cma07g00508 323 MobiDBLite consensus disorder prediction 160 183 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00775 Cma07g00508 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00226 Cma-Chr5:963953 Cma07g00508 Cma-Chr7:2196728 7.30E-86 dispersed
Cma07g00508 Cma-Chr7:2196728 Cma12g00489 Cma-Chr12:2541382 1.58E-89 dispersed
Cma03g00775 Cma-Chr3:6022602 Cma07g00508 Cma-Chr7:2196728 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
35372 PF05687 BES1_N 3.50E-63 No_clan Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00508 K14503 - csv:101216171 553.518