Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma07g00508 | ATGCCTGAAGAAGCCATGACAGGTAGAGCGTCATCGGGAAGGACGCCGACGTGGAAGGAAAGGGAGAACAATAAGAGGAGGGAGAGACGGCGGAGGGCTATTGCTGCTAAGATCTACACTGGTCTCAGAACTCAGGGGAACTATAAGCTTCCTAAGCACTGTGACAACAACGAGGTCTTGAAGGCGCTTTGTAGTGAAGCTGGTTGGGTGGTTGAAGAAGATGGCACCACCTATCGCAAGGGATGCAACCCTCCTCCGATTGATATTGGCACTTCTGCTAACATGAGTGCCTGTTCTTCTCTTCAACCAAGCCCACAATCTTCATGTTTCCCAAGTCCTGTACCATCCTACCATGCCAGCCCTTCTTCATCCTCTTTTCCGAGCCCAACTCGATTTGATGGGAATCCATCTTATCTTTTGCCATTCCTTCAAAATATAACCTCTATACCTGCTAATCTCGCACCTCTCAGAATATCAAACAGTGCACCTGTTACGCCACCTCTTTCTTCCCCGACATCGAGGGGTTCGAAGCGTAAACCTGACTGGGAGTCCATTCCAAATAGCTACTTGACCTCTTTCCGCCACCCCCTCTACGCTGTCTCTGCTCCTTCAAGTCCTACAAGATGCCGCCATCTTACACCAGCAACAATTCCAGAATGTGATGAGTCTGATGCTTCAACTGTGGACTCTGGCCGCTGGGTCAGTTTCCAAACTGTAGCACCTTCTGTTGCTCCTCCCTCCCCTACATTTAATCTGATGAAACCAGTGAGCCAGCAAAACTCTCTCCACGATTCAGTTGACAGACATGGAGCAATGGGCTGGGGTGCTGCATCGGACAGGGGGCGAGGCTCTGAGTTTGAATTCAAAAAATTTGAGAATGGCAAAGTGAAGCCATGGGAGGGCGAGAGAATTCATGAAGTTGGGGTGGACGATTTGGAGCTTACACTTGGGAGTGGGAAGGCCCGTGGTTAA | 972 | 50.0 | MPEEAMTGRASSGRTPTWKERENNKRRERRRRAIAAKIYTGLRTQGNYKLPKHCDNNEVLKALCSEAGWVVEEDGTTYRKGCNPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSYLLPFLQNITSIPANLAPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYLTSFRHPLYAVSAPSSPTRCRHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLHDSVDRHGAMGWGAASDRGRGSEFEFKKFENGKVKPWEGERIHEVGVDDLELTLGSGKARG | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2196728 | 2199203 | - | CmaCh07G005080.1 | Cma07g00508 | 297823 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma07g00508 | 323 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cma07g00508 | 323 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 11 | 133 | IPR008540 | - | |
Cma07g00508 | 323 | MobiDBLite | consensus disorder prediction | 15 | 29 | - | - | |
Cma07g00508 | 323 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 6 | 322 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
Cma07g00508 | 323 | MobiDBLite | consensus disorder prediction | 160 | 175 | - | - | |
Cma07g00508 | 323 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 1 | 6 | 322 | - | - | |
Cma07g00508 | 323 | MobiDBLite | consensus disorder prediction | 160 | 183 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma03g00775 | Cma07g00508 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma05g00226 | Cma-Chr5:963953 | Cma07g00508 | Cma-Chr7:2196728 | 7.30E-86 | dispersed | |
Cma07g00508 | Cma-Chr7:2196728 | Cma12g00489 | Cma-Chr12:2541382 | 1.58E-89 | dispersed | |
Cma03g00775 | Cma-Chr3:6022602 | Cma07g00508 | Cma-Chr7:2196728 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
35372 | PF05687 | BES1_N | 3.50E-63 | No_clan | Cma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma07g00508 | K14503 | - | csv:101216171 | 553.518 |