Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma07g00648 | ATGACTTCCTTGCCCTCCACCACCTCCTCCTCCTCCTCCCCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCCTTCTTCTTCTTCTTCCCCTTCTTCTTCTTCCCCTTCTTCTTCTTCTTCTTCTTCCTCCCCTTCTTCTTCTTCTTCTTCTTCTTCAATTCATTCTTTTGGATTCCTTTCAACGAAGCATCGCTGCAAGTCCGAGCCATCTCCTATAGAAAGTGACATTGCATCAGGTTTTCCTTATATTGTAACTGAAGAATTTATTTTCATCAACTATCTCAGAAAAATGGAAAGGTTTTTGGACGAGAATTTTGGAGGCGTCAAACCCAAAAACTCGTCTGACGAGGTGCTCCAGAAGTGGAGGGATCTTTGTGGAGTGGTTAAGAACCCTAAAAGGAGGTTTCGCTTTACCGCCAATCTCTCCAAGCGTGGCGAAGCTGCTGCTATGCGCCAGAGTAATCAGGAGAAGTTGAGGGTCGCAGTTTTAGTCTCAAAAGCTGCATTTCAATTCATCCAAGGTATGCAACCAAGTGATTATAATGTTCCGGAGGATGTCAAAGCTGCAGGTTTCCATATTTGTGCTGATGAACTCGGGGCAATTGTTGAAGGCCATGATCCAAAGAAGTTAAAACATCATGGCGGTGTTGAAGGAATTGCTCAGAAGCTCTGTACATCAACAACAACTGGGCTTAATGGTGATGCTGATGCACTCAACCGTAGGCAAGAGATTTATGGAGTTAATAAATTTGCTGAGAGTGAACAGAGGAGTTTCTTGGTGTTCGTTTGGGAGGCACTCCAAGACATGACTCTCATGATCCTTGGACTCTGTGCCTTCGTCTCTTTGGTAGTTGGCATAATAACGGAAGGATGGCCGCATGGGGCTCATGATGGCCTTGGAATTGTTGCCAGTATCTTGTTAGTTGTATTTGTGACAGCAACTAGTGATTATCGACAATCCTTGCAGTTCAAGGACTTGGATAAGGAGAAAAAGAAGATATCAATTCAGGTTACAAGGAATGATTATAGACAGAAAATGTCAATTTATGATTTGCTTCCTGGAGATATTGTGCACCTGTCTCTTGGGGACCAAGTTCCTGCAGATGGACTATTTGTTTCAGGGTTTTCTGTGTTGATTGACGAGTCAAGTTTGACTGGAGAAAGTGAGCCAGTGATGGTGAGTGCAGAAAGCCCTTTTCTTTTATCAGGAACTAAAGTTCAAGATGGATCCTGCAAGATGATGATCACTACTGTTGGGATGAGAACCCAATGGGGTAAGTTGATGGCCACTCTTAGTGAAGGTGGAGATGATGAAACTCCATTGCAGGTGAAATTGAATGGAGTGGCAACAATTATTGGGAAAATAGGTCTTTTCTTTGCCATCATCACATTCGCTGTGTTGGTTCAAGGATTGGTTAGCCAGAAACTTCGGGAAGGGACTCACTGGAACTGGTCAGGAGATGACGCATTAGAGATATTGGAATTCTTTGCTGTTGCAGTCACAATTGTTGTTGTTGCTGTGCCAGAGGGGCTTCCTTTGGCTGTGACATTAAGCCTTGCCTTTGCCATGAAGAAAATGATGAATGATAAAGCACTTGTCCGTCACCTTGCAGCTTGTGAAACAATGGGTTCTGCCACAACTATTTGTAGTGACAAAACTGGAACAATCACTACAAATCACATGACGGTGGTCAAATCATGCATTTGCATGAATGTCAAAGAATCAAGTAATAATCCATCAAGCTTCTGCTCTGATCTTCCATCCTCCGTTGTCAAGATTCTGCTACAATCAATATTCAACAACACTGGGGGAGAAGTCGTAATCAACAAAAATGGCAAACGTGAGTTGTTGGGCACTCCCACTGAGACTGCATTATTAGAGTTTGGTCTTTCACTCGGTGGTGATTTTCAGGCTGAGAGACAGGCAGGTAAACTTATTAAAGTTGAGCCATTCAATTCTTTGAAAAAGCGGATGGGTGTTGTCCTACAATTTCCTGAAGGTGGTTTCCGAGCTCACACTAAAGGTGCTTCAGAAATAGTATTGGCTGCCTGTGACAAGGTGATCAACTCGAGTGGTGAGGTTGTTCCTTTAGATGAAGCTTCCACCAAACGTCTCAATATTATTATCGATCAATTTGCTGGTGAGGCTCTCCGAACACTTTGCCTTGCCTATATGGAACTGGAAAATGGATTCTCTGTCAATGATCCTATTCCCGTTTCTGGTTATACCTGCATTGGTATTGTGGGTATTAAAGATCCTGTTCGTCCTGGTGTTAAGGAGTCTGTTGCAGTTTGTCGTTCAGCTGGTATTACTGTACGAATGGTTACTGGCGACAATATTAATACTGCAAAAGCTATTGCTAAGGAATGTGGAATTCTCACCGATGATGGCATAGCCATCGAGGGTCCAGATTTCAGGGAGAAAACTCAAGAGGAATTGCTTAAAATTATTCCCAAAATTCAGGTGATGGCTCGATCCTCACCTCTAGATAAGCACACTCTGGTCAAGCATTTGCGGACCACCTTTGACGAAGTTGTTGCAGTTACTGGTGATGGAACAAACGATGCTCCTGCGCTTCACGAAGCAGATATTGGACTAGCAATGGGCATCGCTGGAACTGAGGTCGCCAAAGAGAGTGCTGATGTGATCATTCTTGATGACAATTTCTCTACTATCGTGACTGTGGGAAAATGGGGTCGTTCTGTTTACATAAATATTCAAAAATTCGTGCAATTCCAGCTGACTGTCAACATTGTGGCGTTGATTGTGAACTTCTCTTCAGCTTGTTTGACAGGTAATGCACCCCTTACTGCAGTCCAGCTGTTGTGGGTGAACATGATTATGGACACACTTGGAGCTTTGGCTCTCGCCACTGAGCCTCCGAATGATGAGTTGATGAAGCGCTTGCCCGTTGGAAGGAGAGGAAGTTTTATCAGCAATGTCATGTGGAGAAATATCTTGGGGCAGTCCGTGTATCAGCTCTCAGTGATATGGTTTTTACAGGCCAAAGGGAAAGAAGCGTTTGATCTAGACAGCACTGATTCTGATCAGATACTGAATACCCTCATCTTCAATTCCTTTGTGTTCTGTCAGATTTTTAACGAAATAAGTTCCAGGGAGATGGACAAAATCGATGTCTTTCAAGGCATGCTTAATAACTATGTGTTTGTTGCTGTCATTGGTTCCACCGTTCTGTTCCAAATACTAATCATCGAATTTTTGGGAACATTTGCAAGCACAACCCCTCTGACTTCATCGGAGTGGCTGTTTAGCGTGGTGGTTGGATTTCTAGGCATGCCCATTGCTGCTTTCTTAAAGACTATTCCGGTATAA | 3342 | 43.33 | MTSLPSTTSSSSSPSFSSSSSSSSSSPSSSSSPSSSSPSSSSSSSSPSSSSSSSSIHSFGFLSTKHRCKSEPSPIESDIASGFPYIVTEEFIFINYLRKMERFLDENFGGVKPKNSSDEVLQKWRDLCGVVKNPKRRFRFTANLSKRGEAAAMRQSNQEKLRVAVLVSKAAFQFIQGMQPSDYNVPEDVKAAGFHICADELGAIVEGHDPKKLKHHGGVEGIAQKLCTSTTTGLNGDADALNRRQEIYGVNKFAESEQRSFLVFVWEALQDMTLMILGLCAFVSLVVGIITEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNDYRQKMSIYDLLPGDIVHLSLGDQVPADGLFVSGFSVLIDESSLTGESEPVMVSAESPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAIITFAVLVQGLVSQKLREGTHWNWSGDDALEILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTITTNHMTVVKSCICMNVKESSNNPSSFCSDLPSSVVKILLQSIFNNTGGEVVINKNGKRELLGTPTETALLEFGLSLGGDFQAERQAGKLIKVEPFNSLKKRMGVVLQFPEGGFRAHTKGASEIVLAACDKVINSSGEVVPLDEASTKRLNIIIDQFAGEALRTLCLAYMELENGFSVNDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIAKECGILTDDGIAIEGPDFREKTQEELLKIIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGSFISNVMWRNILGQSVYQLSVIWFLQAKGKEAFDLDSTDSDQILNTLIFNSFVFCQIFNEISSREMDKIDVFQGMLNNYVFVAVIGSTVLFQILIIEFLGTFASTTPLTSSEWLFSVVVGFLGMPIAAFLKTIPV | 1113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2816696 | 2822860 | - | CmaCh07G006480.1 | Cma07g00648 | 297963 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma07g00648 | 1113 | PRINTS | H+-transporting ATPase (proton pump) signature | 852 | 868 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma07g00648 | 1113 | PRINTS | H+-transporting ATPase (proton pump) signature | 884 | 909 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma07g00648 | 1113 | PRINTS | H+-transporting ATPase (proton pump) signature | 708 | 726 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma07g00648 | 1113 | CDD | P-type_ATPase_Ca_PMCA-like | 241 | 985 | - | - | |
Cma07g00648 | 1113 | Gene3D | - | 267 | 1109 | - | - | |
Cma07g00648 | 1113 | PRINTS | P-type cation-transporting ATPase superfamily signature | 749 | 760 | - | - | |
Cma07g00648 | 1113 | PRINTS | P-type cation-transporting ATPase superfamily signature | 771 | 781 | - | - | |
Cma07g00648 | 1113 | PRINTS | P-type cation-transporting ATPase superfamily signature | 552 | 566 | - | - | |
Cma07g00648 | 1113 | PRINTS | P-type cation-transporting ATPase superfamily signature | 876 | 888 | - | - | |
Cma07g00648 | 1113 | PRINTS | P-type cation-transporting ATPase superfamily signature | 383 | 397 | - | - | |
Cma07g00648 | 1113 | PRINTS | P-type cation-transporting ATPase superfamily signature | 852 | 871 | - | - | |
Cma07g00648 | 1113 | Pfam | Cation transporter/ATPase, N-terminus | 215 | 284 | IPR004014 | - | |
Cma07g00648 | 1113 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 104 | 148 | IPR024750 | GO:0005516 | |
Cma07g00648 | 1113 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 558 | 761 | IPR023299 | GO:0000166 | |
Cma07g00648 | 1113 | SMART | Cation_ATPase_N_a_2 | 213 | 289 | IPR004014 | - | |
Cma07g00648 | 1113 | Pfam | haloacid dehalogenase-like hydrolase | 836 | 892 | - | - | |
Cma07g00648 | 1113 | SUPERFAMILY | Calcium ATPase, transduction domain A | 338 | 432 | IPR008250 | - | |
Cma07g00648 | 1113 | Gene3D | - | 562 | 756 | IPR023299 | GO:0000166 | |
Cma07g00648 | 1113 | Pfam | E1-E2 ATPase | 336 | 530 | - | - | |
Cma07g00648 | 1113 | SFLD | p-type atpase | 534 | 904 | IPR044492 | - | |
Cma07g00648 | 1113 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 215 | 1112 | IPR023298 | - | |
Cma07g00648 | 1113 | SFLD | C1.7: P-type atpase like | 534 | 904 | - | - | |
Cma07g00648 | 1113 | Gene3D | - | 549 | 897 | IPR023214 | - | |
Cma07g00648 | 1113 | SUPERFAMILY | HAD-like | 550 | 957 | IPR036412 | - | |
Cma07g00648 | 1113 | PANTHER | CATION TRANSPORTING ATPASE | 104 | 1112 | - | - | |
Cma07g00648 | 1113 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 554 | 560 | IPR018303 | - | |
Cma07g00648 | 1113 | Pfam | Cation transport ATPase (P-type) | 612 | 690 | - | - | |
Cma07g00648 | 1113 | Gene3D | - | 116 | 176 | - | - | |
Cma07g00648 | 1113 | Pfam | Cation transporting ATPase, C-terminus | 937 | 1110 | IPR006068 | - | |
Cma07g00648 | 1113 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Cma07g00648 | 1113 | Gene3D | - | 239 | 435 | - | - | |
Cma07g00648 | 1113 | PANTHER | CALCIUM-TRANSPORTING ATPASE 1 | 104 | 1112 | - | - | |
Cma07g00648 | 1113 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 493 | 578 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma07g00648 | 1113 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 818 | 933 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma07g00648 | 1113 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 209 | 1113 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma03g00914 | Cma07g00648 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma07g00648 | Cma-Chr7:2816696 | Cma15g00783 | Cma-Chr15:3900023 | 0 | dispersed | |
Cma14g00550 | Cma-Chr14:2735274 | Cma07g00648 | Cma-Chr7:2816696 | 0 | transposed | |
Cma01g01785 | Cma-Chr1:11948321 | Cma07g00648 | Cma-Chr7:2816696 | 0 | wgd | |
Cma03g00914 | Cma-Chr3:6618043 | Cma07g00648 | Cma-Chr7:2816696 | 0 | wgd | |
Cma07g00648 | Cma-Chr7:2816696 | Cma09g00290 | Cma-Chr9:1192471 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma07g00648 | K01537 | - | csv:101212315 | 1855.49 |