Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00660 ATGGGTCGCTTTAATCTTCTTATTGTGCTGTCTCTTCTTTCCCTCTCCGTCTTCCCTTCTCCCTCTGTCGCCCAACTCCGACAAAACTTCTACGCCGACATTTGCCCAAATGTCGAAACCATTGTCCGCAACGAAGTCACTAAAAAATTTCAGCAAACTTTCGTAACTGTTCCTGCCACTCTCCGCCTCTTCTTTCACGATTGCTTCGTTCAGGGATGTGATGCCTCGGTGATCATTGCTTCCACTGCATCCAACAAGGCCGAGAAGGATCATCCTGATAACCTTTCATTGGCTGGAGATGGATTCGACACCGTCATTAAGGCTAAAGCCGCCATCGACGCCATCCCTCAATGCCGAAACAGAGTCTCCTGCGCAGATATTCTCACTATAGCCACTCGGGACGTCATAAAACTGTCGGGCGGACCGTCGTACGCGGTGGAGCTGGGAAGATTAGACGGGCTAGTTTCTAAAGCCTCCGACGTGGACGGTAGACTCCCTGGGCCGACATTTAATCTCAACCAGCTCAATTCACTGTTTGCTGCTAATGGGCTTTCGCAACAAGACATGATCGCACTATCAGCGGCTCACACGCTTGGATTCTCGCACTGCGGGAAGTTCGCAAATCGAATTTACAGTTTTGCCCCGGGGAATCCAGTGGACCCTACACTAAACAAAACTTACGCAACTCAGCTGCAACAAATGTGCCCGAAGAATGTGGACCCCAGAGTGGCGATCAACATGGACCCAATCACACCCAGAGCATTCGACAACATATACTTCAAGAACCTCCAGCAGGGAATGGGTCTGTTCACGTCGGACCAGGTTTTGTTCACGGACACGAGATCCCGACCCACGGTGAACGCATGGGCCGGCGATTCCCAGGCCTTTAATAAGGCGTTTGTTGACGCCATGACAAAGCTGGGGCGGGTGGGCGTGAAGAGCGGTCGAAACGGGAACATCCGACGCGACTGTGGTGCTTTCAACTGA 987 51.87 MGRFNLLIVLSLLSLSVFPSPSVAQLRQNFYADICPNVETIVRNEVTKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTASNKAEKDHPDNLSLAGDGFDTVIKAKAAIDAIPQCRNRVSCADILTIATRDVIKLSGGPSYAVELGRLDGLVSKASDVDGRLPGPTFNLNQLNSLFAANGLSQQDMIALSAAHTLGFSHCGKFANRIYSFAPGNPVDPTLNKTYATQLQQMCPKNVDPRVAINMDPITPRAFDNIYFKNLQQGMGLFTSDQVLFTDTRSRPTVNAWAGDSQAFNKAFVDAMTKLGRVGVKSGRNGNIRRDCGAFN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2885001 2886714 - CmaCh07G006600.1 Cma07g00660 297975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00660 328 CDD secretory_peroxidase 25 327 IPR033905 GO:0004601|GO:0042744
Cma07g00660 328 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 SUPERFAMILY Heme-dependent peroxidases 25 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cma07g00660 328 Gene3D - 29 328 - -
Cma07g00660 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cma07g00660 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 Pfam Peroxidase 42 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 PANTHER PEROXIDASE 6 328 - -
Cma07g00660 328 PANTHER - 6 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma07g00660 328 Gene3D Peroxidase, domain 2 166 307 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00934 Cma07g00660 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00660 Cma-Chr7:2885001 Cma15g00075 Cma-Chr15:360910 7.10E-146 dispersed
Cma07g01087 Cma-Chr7:5845558 Cma07g00660 Cma-Chr7:2885001 0 transposed
Cma20g01022 Cma-Chr20:7265817 Cma07g00660 Cma-Chr7:2885001 0 transposed
Cma03g00934 Cma-Chr3:6685302 Cma07g00660 Cma-Chr7:2885001 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00660 K00430 - csv:101206860 587.8