Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00685 ATGGATAATGGAACTTCTAATAGTTCAACACAATCTGCAGTCAATAATCCAGCTCCAACTGTCCATAGGCAAAATAGTACAGGAGACCAGTTGACATCTATTTTATCTCCGTCTGGAATATCATCTTGGGCTAAGAGTTTTAGAAATCCACAACCGCCTGAAGCAGCAGAAAATGACTCTACGACAGGAAATGCTGGGATGTCAGCAATTGCTCGTTTCAGTAGTGGCTTTGGACTGCGGATGCCTTCAATGTCTCCTGTACGAGATGATACTGCTGCAGATACCAAAGCAGCAGCGAAATCTGATGTTTTCAAATCATTCACAAAAGGTTTAGTCGACACATCTCAGAATGCAGTAAAGGCTATGCAGGTAAAGGCACGCCATATTGTATCTCAGAACAAACGAAGATATCAGGAAGGAGAATTTGATTTGGATATGACATATATCACTGAAAATATAATTGGTATGGGGTTTCCTGCTGGTCACATGAGCTCCGGTTTATTTGGTTTCATTGAGGGATTTTACAGAAATCATATGGAAGAAGTGATCAAATTTTTTGAAACTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCTCATTATTTGAGGGGAAGGTTGCACATTTCCCGTTTGATGATCATAATTGTCCTCCTATCCATCTCATAAAATCATTTTGTCTAAGTGCTTATGCATGGTTAAAGGAGGATATTGAGAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCACGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTTCTAAAGTTCTTCCATACGTCAGCAGAGGCAATTGACTATTACAATCAGAAAAGATGCGTGGATGGAAAGGCTTTGGTTCTTCCTAGCCAGATTAGGTATGTCAAATACTTTGAGCGCATTTTAATACATTTCAACGGAAATACTCCACCTGGACGGAGGTGCATGCTGAGAGGTTTTCGGCTTCACAAGTGCCCGTATTGGGTTAGGCCTTCGATTACAATTTCAAATCACAGTGAGATTTTGTTCTCAACAAAAAAGCATCCAAAGACAAAGGATTTGATGCCAGAAGATTTCTGGATTAGAGCACCAAAGAAAGGATTTGTAGTTTTTGCACTGCCAGGTGAGCCTGGTTTGACAGAGTTGTCTGGGGACTTTAAGATTCATTTTCATGACCGCCATGGAGATTTTTATTGTTGGTTAAATACAACAATGACAGAAAACAAAGTATTATTAAGCGACACAGATCTTGATGGTTTTGATAAGAGAAAACTTCCTACTCCTGGATTCCAGGTCGAGGTTGTGATGATAGACTATAATGGTACTTTGCCAACACGATCGAAAACTAATTCTGCTGGCAAAGGATCTGATTGTCGTCCTATTCATGATCGGGTTCCAGGTCATGAGGCAGCACAATCGAGCAAAAACAAAATTCCTGAGAGTGAAGAAAATGATGATGTATTCTCTGATAGTGATGAAGAAAATGGTGACACAAAAACTGGTCTAGCTCAATCAACTTCTGAAACTGCAAAAGTTGACCATTCATCAACAGCAATTTCTTCTGATAAAATTGGGAGTTTAACGCGTGAAACAAATCATTTGTCACTTGGGAATGAGAGAAATCTACAAATCAATGCTCCAAAAGAACCAAACATTAGTGGCATGATACAACCGTCAGGCCTTGAGACCCCAAATATGGATTCGGCAAGCGCAAGTGAATTCAAAGCAATAGCCGCTGATGCATCAGTTTTCACTTTTGGGGATGAAGAAGACTTTGATAGTGAATGA 1815 39.72 MDNGTSNSSTQSAVNNPAPTVHRQNSTGDQLTSILSPSGISSWAKSFRNPQPPEAAENDSTTGNAGMSAIARFSSGFGLRMPSMSPVRDDTAADTKAAAKSDVFKSFTKGLVDTSQNAVKAMQVKARHIVSQNKRRYQEGEFDLDMTYITENIIGMGFPAGHMSSGLFGFIEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCLSAYAWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFHTSAEAIDYYNQKRCVDGKALVLPSQIRYVKYFERILIHFNGNTPPGRRCMLRGFRLHKCPYWVRPSITISNHSEILFSTKKHPKTKDLMPEDFWIRAPKKGFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKVLLSDTDLDGFDKRKLPTPGFQVEVVMIDYNGTLPTRSKTNSAGKGSDCRPIHDRVPGHEAAQSSKNKIPESEENDDVFSDSDEENGDTKTGLAQSTSETAKVDHSSTAISSDKIGSLTRETNHLSLGNERNLQINAPKEPNISGMIQPSGLETPNMDSASASEFKAIAADASVFTFGDEEDFDSE 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3010426 3014954 - CmaCh07G006850.1 Cma07g00685 298000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00685 604 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 5 604 - -
Cma07g00685 604 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 143 311 IPR029021 -
Cma07g00685 604 SMART PTEN_C2_2 319 447 IPR014020 -
Cma07g00685 604 ProSitePatterns Tyrosine specific protein phosphatases active site. 251 261 IPR016130 GO:0016311|GO:0016791
Cma07g00685 604 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 249 288 IPR000387 GO:0016311|GO:0016791
Cma07g00685 604 ProSiteProfiles Phosphatase tensin-type domain profile. 135 314 IPR029023 -
Cma07g00685 604 MobiDBLite consensus disorder prediction 466 493 - -
Cma07g00685 604 CDD PTP_PTEN 145 310 IPR045101 GO:0016791
Cma07g00685 604 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 5 604 - -
Cma07g00685 604 MobiDBLite consensus disorder prediction 451 577 - -
Cma07g00685 604 MobiDBLite consensus disorder prediction 507 577 - -
Cma07g00685 604 ProSiteProfiles C2 tensin-type domain profile. 321 448 IPR014020 -
Cma07g00685 604 Gene3D Protein tyrosine phosphatase superfamily 120 317 IPR029021 -
Cma07g00685 604 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00685 Cma-Chr7:3010426 Cma11g01149 Cma-Chr11:6608799 1.26E-43 dispersed
Cma11g01730 Cma-Chr11:11504002 Cma07g00685 Cma-Chr7:3010426 0 wgd
Cma19g00587 Cma-Chr19:6516097 Cma07g00685 Cma-Chr7:3010426 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00685 K01110 - csv:101213277 1035.02