Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00696 ATGTCTGATCACAAATCAGGCTCCATGACCGACCAGCTCTCCAGCCAGACTTCTATTTTTGGCCTACGCTTGTGGGTTGTACTTGGGGTTTGTGTTGGAGCTGCTTTTGTGCTTTTTCTGTTTCTAATCTCTCTTTGGATTGCCTCCAAACGCTCTCGCAGGAAGATTTCTCACAGACCCACAATTCCAGTTGACTCCAAAGAAATTCAAGAGATCAGAATCGATCATGCCCTCGCTCAAACCCAAGAACACAAGCCAACTAGACCCCATTTTCAGGTCGACCATCTTCCAGAGCCGGAGCTTATCCCCGGAATTGAGCGGCAAGCGTTGCTTTCGTTGCCTCAGGATGAAGAACGAGTGAATAGAATTAATATTGAGATCGGGAAGGATCATAGGATTTCCTATCCTGAGCGACTTGGTCGGTCGTCTTCCTCGCAGGGCAGTGGAGAGGGCCGATGTGGTGGCGATCAGTTGCCTATAGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGGCATTGGTACACTCTCAGAGAGCTTGAAGCTTCGACTAATGGTTTTTCCCCTGATAACGTAATCGGTGAAGGTGGGTATGGAATTGTTTACCATGGCATATTGGAGGATGGAACTCAGGTTGCTGTTAAGAATTTGCTAAACAATAGAGGACAAGCCGAGAAGGAGTTTAAAGTAGAAGTTGAAGCAATTGGACGAGTCAGACATAAGAACTTAGTTAGATTGCTGGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATACGAGTACATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGAAGTAGGATCTTACAGTCCTCTTACCTGGGAGATCAGAATGAATATCATTCTTGGAACCGCTAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCGAAGGTTGTTCACCGGGATATCAAATCAAGCAATATCTTACTTGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGGCTTGCAAAGCTACTATGCTCTGATAACAGTTATATTACAACCCGTGTCATGGGAACATTTGGCTATGTAGCGCCAGAATATGCAAGTACGGGTATGCTAAATGAAAGAAGTGATGTGTATGGTTTTGGAATACTTGTTATGGAAATAATCTCAGGAAGGAACCCGGTCGACTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTTAAGAGAATGGTCAGTAACCGGAATCCAGAGGGCGTATTGGATCCAAAGCTCTCTGAAAAGCCTACTTCGAGAGCATTAAAGCGGGCGCTTCTTGTTGCATTACGCTGCGTGGACCCAAATGCTCAGAAACGCCCAAAAATGGGACATATTATTCATATGCTTGAAGCTGAAGAGGCTACGTTTAAAGGGGATCGCAAAGCTGGAAAGGACCCAGAGAACTCACATTCAGACAATCTGAAGGATGGTTTAAATGAGAGGCAGGCAACAGAATTAGGTGGCAGCAATGTGGATGAACTCAGTATGCGACAATGA 1521 45.3 MSDHKSGSMTDQLSSQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRRKISHRPTIPVDSKEIQEIRIDHALAQTQEHKPTRPHFQVDHLPEPELIPGIERQALLSLPQDEERVNRINIEIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPIVVPEVSHLGWGHWYTLRELEASTNGFSPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGEVGSYSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYGFGILVMEIISGRNPVDYSRPPDEVNLIDWLKRMVSNRNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEEATFKGDRKAGKDPENSHSDNLKDGLNERQATELGGSNVDELSMRQ 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3064864 3067727 + CmaCh07G006960.1 Cma07g00696 298011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00696 506 CDD STKc_IRAK 192 458 - -
Cma07g00696 506 MobiDBLite consensus disorder prediction 465 506 - -
Cma07g00696 506 Gene3D Transferase(Phosphotransferase) domain 1 262 472 - -
Cma07g00696 506 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Cma07g00696 506 PANTHER RECEPTOR-LIKE KINASE PLANT 1 499 - -
Cma07g00696 506 PANTHER OS01G0323000 PROTEIN 1 499 - -
Cma07g00696 506 Pfam Protein kinase domain 189 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00696 506 ProSiteProfiles Protein kinase domain profile. 186 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00696 506 Gene3D Phosphorylase Kinase; domain 1 168 261 - -
Cma07g00696 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Cma07g00696 506 MobiDBLite consensus disorder prediction 465 487 - -
Cma07g00696 506 SUPERFAMILY Protein kinase-like (PK-like) 167 458 IPR011009 -
Cma07g00696 506 MobiDBLite consensus disorder prediction 491 506 - -
Cma07g00696 506 SMART serkin_6 186 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00696 506 MobiDBLite consensus disorder prediction 136 156 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g00971 Cma07g00696 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g01080 Cma-Chr6:7267301 Cma07g00696 Cma-Chr7:3064864 0 dispersed
Cma07g00696 Cma-Chr7:3064864 Cma14g02059 Cma-Chr14:14306599 0 dispersed
Cma12g00558 Cma-Chr12:2910366 Cma07g00696 Cma-Chr7:3064864 2.05E-67 wgd
Cma03g00971 Cma-Chr3:6874473 Cma07g00696 Cma-Chr7:3064864 0 wgd
Cma05g00175 Cma-Chr5:740818 Cma07g00696 Cma-Chr7:3064864 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68695 PF00069 Pkinase 2.60E-46 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00696 - - cmax:111497422 1011.52