Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00735 ATGTTCGAATACTGCCGATCCTTTCCCCTCCGAGACTACGAATTTGATTCTGTTTTGGCTTGGCTTGGCTTGGGTTTAAAGATAAATCTTCTTTTGCAGGGAGGTGATGATTCTATTTGTTTCTTGTTTAGTTGGAGTAAGTTGGAGTCGACTATGACTTGGCGCCGATACTTTGTTATCGTTATTATCGCAATTCTTTCGGATTCTTTAACAATCGCCGAGGAGTTAACGCCCTGCGAAACCGGGAATTCGGCGGAATTTGTACACCGTCCGTTTGGATTCTCAAACAAAAGCGAAATCAAATTGAATTGCAGCGAAAATGGCGAGACTCAAATCGGAAGATTCCAGGTCCAGAACATTACTGAAAGGAGCATCCTCATCAAACTTCCTTCAGAATGCAATATCTCTATCGATTCAATTTCAGAACTGTTCGGCAAAAACTACAGGCCCACTCTCCGCAACAGTCTCCTCCTGAATTGTACTGAACGACCTATTCCATGCGTAGTAATAGCCAATTTCGACCAGAATCAGCCGCAGAATTGCGGCTTTAATAGCAATAATTTGAGCTGCTTCACCGAGCCCAAGCAAAATGGATTTATGCCGGCTTTGGATAAGTGCCAGTCCCTTTTGTACTCTGTCTTCGTTAATTCTTCATCAGAATCGACCTCCGAGATCGAGTTCGGGGTCATTGAGTTAGAGTGGTGGCTCTCACCCTTGGCTTCCGGAGGATGCGCAAAAAACGCCAATCCCACGGAAATTACCAACTCGACGGGCCTCCTAGGATTTCGTTGCCAATGCACGAAAGGATATGAAGGAAATGCTTACGCCGGCGTCGGCCACGGCTGCCGGAAAGTTTCTCACAAGTGCAATCCTAAAACATTCATTACTGGCCGCTGTAGCGGAGGCAGATTCACTTTTCTGATTGCAGGTGTTTTTGTTGGAGCTTTTCTAATGGCTGTCCTCACCCTCCTCTGTTATTGCATCCGACGCCGCTCAATGTGTCTGAAAGGTCAGATGAGTGCGAAGCGGCTTCTAAGTGAGGCTGCTGGAAATTCCAGTGTAACTTTATATCCCTACAAGGAAATAGAAAGAGCCACTAATGGCTTCTCTGAGAAACAAAGGCTGGGAACTGGAGCCTTTGGTACAGTCTATGCAGGGAGGCTTCATGAGGATGAGTGGGTTGCTGTGAAGAAGATCAAATATAGAGACCACAATAGCATTGATCAGGTCATGAATGAGATAAAACTACTCTCCTCGGTGAGCCACCCAAATCTAGTCCGCTTGCTTGGCTGCTGCATTGAAGAAGGCCAACAGATCCTTGTCTATGAGTTTATGCCCAATGGAACTCTCTCCCAACATCTCCAGAGAGAGCGTGGAAATGGCCTCCGATGGACGACAAGGCTCACCATTGCAGCTGAAACTTCCAATGCAATAGCATACCTACATTCTGCTGTGCATCCACCAATATATCATAGAGATATCAAGTCAAGCAATATACTTTTGGATCATGGATTCAAATCAAAAGTTGCAGATTTTGGTCTTTCTAGACTTGGTATGACAGAAATATCACACGTCTCAACCGCTCCACAAGGGACTCCGGGCTATGTTGATCCACAATACCATCAAAATTTCTATCTTTCAGATAAAAGTGACGTTTATAGTTTTGGAGTAGTCCTGGTAGAGATAATAACAGCATTGAAAGTGGTTGATTTCACTCGTCCCCAGAGTGAAGTAAACCTAGCAGCACTTGCCATTGATAGGATTGGGAGAGGTGCTGTGGATGAACTAATTGATCCTTTCCTCGAGCCACATAGAGATGCTTGGACCCTCTACTCTATTCACAAGGTGGCTGAGCTAGCATTCAGATGCCTTGCTTTTCATAGCGACATGAGGCCTTCAATGACAGAAGTAGCAGAGGAACTGGAATCCATCAGACGCAACGGGTGGACATCAATGGAGGAGAATCTTTGTGCAGCATCATCAGCAGGGTCGGCTTGCTCATCTCCTCGTAGTATAAGCGATAGATCTATTAGTAGCATTACAATTAAGAAGGCCGGGCTGCTTGCAGGACTGGGGAGTCAGAGATTGATAATCCCACCAGAGAACAATCATCAAAAGGACCATCTGCCTCCTGTAGAGGAGATTACGGATAGTTCCCCAGTTTCCATACAAGATCCTTGGTTAAGTGAACAAAGCTCACCTTCAACAAATAGTTTATTGGGTAATGTAGTACGGTGA 2238 45.26 MFEYCRSFPLRDYEFDSVLAWLGLGLKINLLLQGGDDSICFLFSWSKLESTMTWRRYFVIVIIAILSDSLTIAEELTPCETGNSAEFVHRPFGFSNKSEIKLNCSENGETQIGRFQVQNITERSILIKLPSECNISIDSISELFGKNYRPTLRNSLLLNCTERPIPCVVIANFDQNQPQNCGFNSNNLSCFTEPKQNGFMPALDKCQSLLYSVFVNSSSESTSEIEFGVIELEWWLSPLASGGCAKNANPTEITNSTGLLGFRCQCTKGYEGNAYAGVGHGCRKVSHKCNPKTFITGRCSGGRFTFLIAGVFVGAFLMAVLTLLCYCIRRRSMCLKGQMSAKRLLSEAAGNSSVTLYPYKEIERATNGFSEKQRLGTGAFGTVYAGRLHEDEWVAVKKIKYRDHNSIDQVMNEIKLLSSVSHPNLVRLLGCCIEEGQQILVYEFMPNGTLSQHLQRERGNGLRWTTRLTIAAETSNAIAYLHSAVHPPIYHRDIKSSNILLDHGFKSKVADFGLSRLGMTEISHVSTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLVEIITALKVVDFTRPQSEVNLAALAIDRIGRGAVDELIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPSMTEVAEELESIRRNGWTSMEENLCAASSAGSACSSPRSISDRSISSITIKKAGLLAGLGSQRLIIPPENNHQKDHLPPVEEITDSSPVSIQDPWLSEQSSPSTNSLLGNVVR 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3250356 3254106 + CmaCh07G007350.1 Cma07g00735 298050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00735 745 Gene3D Phosphorylase Kinase; domain 1 330 444 - -
Cma07g00735 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 70 683 IPR045274 GO:0007166
Cma07g00735 745 MobiDBLite consensus disorder prediction 699 745 - -
Cma07g00735 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 70 683 - -
Cma07g00735 745 SUPERFAMILY Protein kinase-like (PK-like) 349 642 IPR011009 -
Cma07g00735 745 Pfam Protein tyrosine and serine/threonine kinase 372 641 IPR001245 GO:0004672|GO:0006468
Cma07g00735 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Cma07g00735 745 SMART serkin_6 369 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00735 745 MobiDBLite consensus disorder prediction 717 745 - -
Cma07g00735 745 ProSiteProfiles Protein kinase domain profile. 369 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00735 745 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
Cma07g00735 745 Gene3D Transferase(Phosphotransferase) domain 1 445 662 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00735 Cma-Chr7:3250356 Cma15g00109 Cma-Chr15:493811 2.02E-92 dispersed
Cma08g00161 Cma-Chr8:881126 Cma07g00735 Cma-Chr7:3250356 1.86E-54 transposed
Cma12g00502 Cma-Chr12:2602510 Cma07g00735 Cma-Chr7:3250356 1.08E-170 wgd
Cma03g01017 Cma-Chr3:7079778 Cma07g00735 Cma-Chr7:3250356 0 wgd
Cma05g00216 Cma-Chr5:911920 Cma07g00735 Cma-Chr7:3250356 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68699 PF07714 PK_Tyr_Ser-Thr 7.70E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00735 - - csv:101222324 1138.64