Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00767 ATGGCGATGGATCAAGCGTTGATCATCATAAAGCTAGAGAGAGAAAACGCCCAGCAGCTGATTTCATTGAAATCTTCACTTCCCAATCCAAACCTCCTTCAAAACTGGCTTTCCAACGGCGACCCATGTTCGTTTTCCGGCGTTTCCTGCAAGGAAACCAGAGTTTCCGCCATAGATTTGAGCTTCGTGTCGTTGAGCTCTAATTTCAGCCATGTTTTCCCTTTGCTTGCGGCTCTCGACCATTTGGAATCGCTTTCTCTGAAATCCACGAACCTTACTGGCTCCATTTCCCTGCCCGCTGGATTCAAATGTAGCCCTCTTCTTTCTTCTCTTGATCTGTCACTCAATGGCTTGTTCGGCTCTGTTTCTGATGCCTCTTATTTGGGGCTTTGTTCCAATATCAAGTCGCTTAATCTGTCATTTAACGCTTTTGATTTTCCCCCAAAAGACTCTGCCGCCGGATTGAAGCGGGATTTGCAAGTTCTTGATCTTTCTTCCAATCGGATTGTTGGGTCGAAATTAGTTCCATGGGTTCTCTCTACTGGGTGTAGTAATTTGCAGTTCTTGGCATTGAAGGGCAACAAAATCAGCGGCGAAATTAATCTCTCATCCTGTAATAAACTCCAGCATTTGGATATCTCCGGCAACAATTTCTCTGCGGGTATTCCGTCGTTAGGCGATTGCTCTGTTTTGGAGTATCTTGATATATCCGGCAATAAGTTCACCGGCGACGTCGGAAATACTCTGTCTTCTTGTTTGCAACTGAGATTTCTGAATCTCTCGAGCAACCAGTTTCAGGGATCAATCCCTTCATTTTCATCGCCGAATTTGTGGTTTCTTTCGCTTGCTAACAACGATTTTCAGGGGGAGATTCCGGTGAGTATTGCTGATTCTTGTTCTAGTTTGGTTCATTTGGATCTTTCTGAAAATAGATTGATTGGGGGTATACCTTCTGGTTTGGGGTTTTGTTCTTTGTTGGAATCTTTGGACATTTCTAAAAATAACCTCTCTGGTGAGCTCCCCATTGATGTTTTTGCCAAAATGAGTAGTTTGAAGAGACTGTCCATGTCGGATAACAAGTTTTTCGGGGTTTTGTCGGATTCTCTGTCTCAGCTCACCACTTTGAATTCCTTGGATCTGAGTTCTAATAACTTCTCTGGCTCGATTCCTGTCGGGCTCTGTGAAGATCCTAAGAACAGCTTGAAAGAATTGTTTCTTCAGAACAATTGGTTGACTGGTCGGATCCCTGCAAGTATTAGCAACTGTTCTCAGCTGGTTTCGCTTGATTTGAGCTTCAACTTTCTGAGTGGGACTATCCCTTCAAGCTTGGGATCACTATCTAAGCTGAAGAACTTGATCATGTGGTTGAATCAGCTGGAGGGGGAGATTCCATCGGATTTTAAGAACTTTCAGGGGCTTGAGAATCTGATCCTGGATTTCAATGAGCTCACCGGGACGATTCCTTCTGGGCTAAGCAATTGCACAAACTTGAACTGGATTTCGTTGTCGAACAACCGGTTGAGCGGAGAGATACCGAGGTGGATTGGGCAGCTGCCAAGCCTGGCCATACTTAAGCTGAGTAACAACTCATTCCATGGAAGGATTCCTCGGGAGCTGGGTGATTGTCGGAGCTTGATCTGGCTTGATCTGAATACGAATTTGTTGAACGGAACGATTCCACCGGAGCTGTTTCGACAATCGGGTAACATTGCTGTAAACTTTATCACTGGGAAGTCTTATGCTTACATTAAGAATGATGGTAGCAAGCAGTGCCATGGAGCTGGAAATTTGGTGGAGTTTGCTGGGATAAGACAGGAACAAGTGAACAGGATATCAAGTAAGAGTCCCTGCAATTTCACCAGGGTTTATAAAGGAATGACTCAACCGACTTTTAACCATAACGGGTCGATGATCTTCCTCGATCTTTCGCATAATATGTTGTCTGGTAGTATTCCAAAGGAGATTGGTTCTACAAAATATCTGTACATATTGGATTTGGGGCACAACAGGGTGTCGGGAGGCATTCCGCAGGAGCTGGGCGACTTGACGAAGCTCAACATTCTTGATCTGTCAAGCAATGAGCTTGAAGGATCAATACCATTATCCTTGACTGGGCTTTCCTCCCTCATGGAGATTGATCTGTCAAACAATCATCTCAATGGTTCGATACCCGAATCAGCTCAGTTCGAAACGTTCCCGGCATCTGGTTTTGCAAATAATTCTGGCCTCTGTGGGTATCCTCTGCCTCAATGCAGGGTTGATTCAGCAGCAAATGCAAACTCTCAGCATCAAAGATCTCACAGGAAACAGGCATCGCTTGCAGGGAGCGTCGCAATGGGGCTACTATTCTCCCTCTTCTGTATATTCGGTCTGATCATAGTCGTTATCGAGATGAAGAAGAGAAGGAAAAACAAGGATTCTGCTCTTGATTCTTATATTGACACTCATTCCCATTCAGGCACCACAACCACCGTTAACTGGAAGAACACCTGTGTTCGTGAAGCATTGAGCATCAATCTTGCAACATTCGAGAAGCCTCTTCGGAAGCTTACGTTTGCAGATCTTCTCGACGCCACCAATGGCTTCCACGACAATACGCTTATTGGTTCGGGGGGTTTCGGTGACGTATATAAGGCCCAATTGAAGGATGGAAGCATTGTAGCCATCAAGAAGCTCATTCATGTCAGTGGACAGGGTGATAGGGAGTTCACTGCAGAAATGGAAACCATTGGCAAAATCAAACACCGAAACCTCGTTCCTCTTCTCGGCTACTGCAAAGTCGGAGATGAACGCCTGCTTGTGTACGACTACATGAAATATGGAAGCTTGGAAGACGTTTTACACGATCATAACAAGGCTGGAATCAAACTCAATTGGGCTGCTAGAAGAAAGATTGCCATTGGAGCTGCTAGGGGCCTGGCTTTCCTTCACCACAATTGCATCCCTCACATCATCCACAGGGACATGAAATCCAGCAATGTCTTATTGGATGAGAACTTGGAAGCCAGAGTCTCTGATTTTGGTATGGCTCGACTCATGAGTGCTATGGACACCCATTTGAGTGTCAGCACATTAGCCGGTACCCCCGGTTACGTCCCTCCCGAATATTACCAAAGCTTCCGCTGTTCGACCAAAGGCGATGTGTATAGCTACGGTGTCGTTATGCTTGAGCTTTTGACAGGAAAACGACCCACAGATTCTGCCGATTTTGGGGACAACAACCTCGTCGGATGGGTTAAACAACACGCCAAGTTGGACCTAACCAATGTCTTCGATCCCGAGCTCTTGAAGGAAGATCCCAACCTTAAGATAGAGCTTTTAGAACACTTGAAAGTAGCTGTTGCTTGCTTAGATGATAGGTCCTGGCGGCGTCCAACCATGATCCAAGTGATGACGTTGTTCAAGGAAATCCAAGCTGGGTCGGGGATGGATTCGCAATCTACCATCGGATCCGACAACGGTGGATTCAGCATCGACATGGTAGACATGAGCTTAAAGGAAGTACCAGAAGGCAAGTACTAG 3522 45.66 MAMDQALIIIKLERENAQQLISLKSSLPNPNLLQNWLSNGDPCSFSGVSCKETRVSAIDLSFVSLSSNFSHVFPLLAALDHLESLSLKSTNLTGSISLPAGFKCSPLLSSLDLSLNGLFGSVSDASYLGLCSNIKSLNLSFNAFDFPPKDSAAGLKRDLQVLDLSSNRIVGSKLVPWVLSTGCSNLQFLALKGNKISGEINLSSCNKLQHLDISGNNFSAGIPSLGDCSVLEYLDISGNKFTGDVGNTLSSCLQLRFLNLSSNQFQGSIPSFSSPNLWFLSLANNDFQGEIPVSIADSCSSLVHLDLSENRLIGGIPSGLGFCSLLESLDISKNNLSGELPIDVFAKMSSLKRLSMSDNKFFGVLSDSLSQLTTLNSLDLSSNNFSGSIPVGLCEDPKNSLKELFLQNNWLTGRIPASISNCSQLVSLDLSFNFLSGTIPSSLGSLSKLKNLIMWLNQLEGEIPSDFKNFQGLENLILDFNELTGTIPSGLSNCTNLNWISLSNNRLSGEIPRWIGQLPSLAILKLSNNSFHGRIPRELGDCRSLIWLDLNTNLLNGTIPPELFRQSGNIAVNFITGKSYAYIKNDGSKQCHGAGNLVEFAGIRQEQVNRISSKSPCNFTRVYKGMTQPTFNHNGSMIFLDLSHNMLSGSIPKEIGSTKYLYILDLGHNRVSGGIPQELGDLTKLNILDLSSNELEGSIPLSLTGLSSLMEIDLSNNHLNGSIPESAQFETFPASGFANNSGLCGYPLPQCRVDSAANANSQHQRSHRKQASLAGSVAMGLLFSLFCIFGLIIVVIEMKKRRKNKDSALDSYIDTHSHSGTTTTVNWKNTCVREALSINLATFEKPLRKLTFADLLDATNGFHDNTLIGSGGFGDVYKAQLKDGSIVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGDERLLVYDYMKYGSLEDVLHDHNKAGIKLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVMLELLTGKRPTDSADFGDNNLVGWVKQHAKLDLTNVFDPELLKEDPNLKIELLEHLKVAVACLDDRSWRRPTMIQVMTLFKEIQAGSGMDSQSTIGSDNGGFSIDMVDMSLKEVPEGKY 1173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3443007 3447075 - CmaCh07G007670.1 Cma07g00767 298082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00767 1173 SMART LRR_typ_2 518 542 IPR003591 -
Cma07g00767 1173 SMART LRR_typ_2 470 494 IPR003591 -
Cma07g00767 1173 SMART LRR_typ_2 543 566 IPR003591 -
Cma07g00767 1173 SMART LRR_typ_2 372 396 IPR003591 -
Cma07g00767 1173 SMART LRR_typ_2 299 323 IPR003591 -
Cma07g00767 1173 SMART LRR_typ_2 682 705 IPR003591 -
Cma07g00767 1173 SMART LRR_typ_2 706 729 IPR003591 -
Cma07g00767 1173 SMART LRR_typ_2 348 371 IPR003591 -
Cma07g00767 1173 SUPERFAMILY RNI-like 37 270 - -
Cma07g00767 1173 Gene3D Phosphorylase Kinase; domain 1 822 937 - -
Cma07g00767 1173 ProSitePatterns Protein kinases ATP-binding region signature. 868 891 IPR017441 GO:0005524
Cma07g00767 1173 SUPERFAMILY L domain-like 628 747 - -
Cma07g00767 1173 SMART serkin_6 862 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00767 1173 Pfam Leucine rich repeat 472 530 IPR001611 GO:0005515
Cma07g00767 1173 Pfam Leucine rich repeat 326 385 IPR001611 GO:0005515
Cma07g00767 1173 Pfam Leucine rich repeat 661 719 IPR001611 GO:0005515
Cma07g00767 1173 Pfam Protein kinase domain 862 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00767 1173 ProSiteProfiles Protein kinase domain profile. 862 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00767 1173 Pfam Leucine rich repeat N-terminal domain 17 50 IPR013210 -
Cma07g00767 1173 SUPERFAMILY Protein kinase-like (PK-like) 848 1138 IPR011009 -
Cma07g00767 1173 PANTHER SYSTEMIN RECEPTOR SR160 13 1149 - -
Cma07g00767 1173 Gene3D Ribonuclease Inhibitor 20 751 IPR032675 -
Cma07g00767 1173 Pfam Leucine Rich Repeat 400 422 IPR001611 GO:0005515
Cma07g00767 1173 Pfam Leucine Rich Repeat 425 446 IPR001611 GO:0005515
Cma07g00767 1173 Gene3D - 573 633 - -
Cma07g00767 1173 Pfam Brassinosteroid receptor island domain 568 632 IPR045381 -
Cma07g00767 1173 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 1149 - -
Cma07g00767 1173 SUPERFAMILY RNI-like 247 562 - -
Cma07g00767 1173 Gene3D Transferase(Phosphotransferase) domain 1 938 1139 - -
Cma07g00767 1173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 984 996 IPR008271 GO:0004672|GO:0006468
Cma07g00767 1173 Pfam Leucine Rich repeat 204 219 IPR001611 GO:0005515
Cma07g00767 1173 CDD STKc_IRAK 868 1137 - -
Cma07g00767 1173 PRINTS Leucine-rich repeat signature 682 695 - -
Cma07g00767 1173 PRINTS Leucine-rich repeat signature 326 339 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g01053 Cma07g00767 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02153 Cma-Chr4:15068257 Cma07g00767 Cma-Chr7:3443007 5.05E-38 dispersed
Cma07g00767 Cma-Chr7:3443007 Cma15g00877 Cma-Chr15:4444583 0 dispersed
Cma03g01053 Cma-Chr3:7263570 Cma07g00767 Cma-Chr7:3443007 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68702 PF00069 Pkinase 6.70E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00767 K13415 - csv:101209118 2043.08