Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00805 ATGCCTGCTTGGTGGGCAAGAAAATTCAGTAAAAGCAAAGAGCATCACAATCCCCCCACTAATTTTCTCAACTTCTCTAAATCTTCTACTTCTTCCCCCAAATCTGAGCCTAAGAAGGGGGCAGAAACCCCCAGGAGCTTCGATGACCTCTCTTCTCTGATTTTCTCTCGTAATTCCCCCAGGCCTTCCAGGGATCTGGCCTCTTCTGGGGTTGCTGATGTAGGCGGCGGCGGCTCTTCTGGGTTCTCTGGTTTTGACTCCGATAGTGGGGATAAGAGTCACCCTCTTCCGAGACCTGCTACTCCCCCCGCTTTTGGGATTGATCATGGAGTCGGGATTGGATCTGGGTCTGTTTCGGTTTCCAGTGTTAGCTCTTCTGGGTCTTCGGATGAACATCCATCGAATCAAGAACAGCTTCAGTTTGGAGCTTACAGAGGATTTGCTGATACCAGAATAGAGGCAAGGCCAAGAAGTCCCGGTCCAGGATCGAGAGGACCCACGAGTCCTACATCGCCTCTGAACTCACGGTTCTGTGGCACGAGTCTCGAGTCTCCGACCGGCAAGCTAGATGATGGGAAGAGTCGATGTCATAAGCTGCCGCTTCCTCCAAGCTCTCCCACCAGCCCTTCTTCGTTGACCAGCACGAAAGCTGTCAATATCGGTGATAATGACCCGGCTACCCAATCGAAGTGGAAGAGAGGAAGGCTTCTAGGAAGGGGAACATTTGGGCATGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATTAAGGAGGTCAAGGTTATTAGCGATGACTTGACATCGAAGGAATGTCTCAAGCAATTGAATCAGGAGATAACCCTGCTCAGTCAGCTGTCGCATCCGAACATCGTCCGGTACTATGGTAGTGAAATGGGTGACGAATCGCTCTCCGTCTATTTAGAATACATCTCCGGTGGCTCAATCCACAAATTACTACAAGAATATGGCGCCTTCAAAGAACCTGTTATAAGAAATTATACCCGAAAGATTCTTTCTGGGCTTGCGTATCTGCACGGGAGAAATACAGTGCATAGGGACATCAAAGGGGCTAATATCTTAGTGGATCCAAATGGCGAGGTCAAGTTGGTCGACTTCGGCATGGCAAAACACATGACGAATTGTACTTCGATGCTTTCGTTCAAAGGCAGTCCTTATTGGATGGCCCCTGAGGTTGTGATGCATACGAATGGGTATAGTCTTGCTGTAGATATTTGGAGTTTAGGGTGTACGGTTCTCGAAATGGCAACGTCTAAGCCACCTTGGAGCAAATATGAAGGGGTGGCTGCCATATTCAAAATTGGAAATAGCAAAGATATGCCTGAAATCCCAGACCATCTCTCCTATGATGCTAAAAACTTTGTGCAGCTATGTTTACAACGCAATCCATCGGCACGTCCTTCCGCTGCAGAACTGCTGGATCACCCTTTTGTTCAAGATGCAGTAACACCAAGAGCATCTGATGTCAACTTTTCCATGGATGCATTTCCCTTTAGCTTCGATGGATTCCAGACTCCGCCATTGTTAGATCAGCATCCAAACAGAAAAAGTATAAGCATATGTGATGGAGACTACGTGACAAACCCGACAACCTCGTCGAGAGCTTTGAGGAGTCCTAGGGGAAATGCACGAATGATCACGTCCTTGCCTGTCTCTCCGTCTTCGAGTCCGTTACGGTCGTATGGCCCGCTACACCAGAGCTGTTATCGTTCACCACCTCACACATCTTACATGGGGTTGGGTCAAAGCTGTTACAATTTAAACGAATACGCATATAACACGAGACCAAACACATTGTTCACACTCGACCCATCACGAGATTCATCGCTATTGAAAGTGCGGACTCATGGTGGATCACCAAGAAGACCTCTTTGA 1902 47.9 MPAWWARKFSKSKEHHNPPTNFLNFSKSSTSSPKSEPKKGAETPRSFDDLSSLIFSRNSPRPSRDLASSGVADVGGGGSSGFSGFDSDSGDKSHPLPRPATPPAFGIDHGVGIGSGSVSVSSVSSSGSSDEHPSNQEQLQFGAYRGFADTRIEARPRSPGPGSRGPTSPTSPLNSRFCGTSLESPTGKLDDGKSRCHKLPLPPSSPTSPSSLTSTKAVNIGDNDPATQSKWKRGRLLGRGTFGHVYLGFNSVSGQMCAIKEVKVISDDLTSKECLKQLNQEITLLSQLSHPNIVRYYGSEMGDESLSVYLEYISGGSIHKLLQEYGAFKEPVIRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPNGEVKLVDFGMAKHMTNCTSMLSFKGSPYWMAPEVVMHTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDMPEIPDHLSYDAKNFVQLCLQRNPSARPSAAELLDHPFVQDAVTPRASDVNFSMDAFPFSFDGFQTPPLLDQHPNRKSISICDGDYVTNPTTSSRALRSPRGNARMITSLPVSPSSSPLRSYGPLHQSCYRSPPHTSYMGLGQSCYNLNEYAYNTRPNTLFTLDPSRDSSLLKVRTHGGSPRRPL 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3686636 3691680 + CmaCh07G008050.1 Cma07g00805 298120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00805 633 ProSiteProfiles Protein kinase domain profile. 231 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00805 633 MobiDBLite consensus disorder prediction 49 65 - -
Cma07g00805 633 SMART serkin_6 231 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00805 633 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 610 - -
Cma07g00805 633 MobiDBLite consensus disorder prediction 208 226 - -
Cma07g00805 633 SUPERFAMILY Protein kinase-like (PK-like) 229 579 IPR011009 -
Cma07g00805 633 Pfam Protein kinase domain 232 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma07g00805 633 ProSitePatterns Protein kinases ATP-binding region signature. 237 260 IPR017441 GO:0005524
Cma07g00805 633 MobiDBLite consensus disorder prediction 153 229 - -
Cma07g00805 633 MobiDBLite consensus disorder prediction 1 141 - -
Cma07g00805 633 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 610 - -
Cma07g00805 633 CDD STKc_MEKK1_plant 230 487 - -
Cma07g00805 633 MobiDBLite consensus disorder prediction 167 182 - -
Cma07g00805 633 MobiDBLite consensus disorder prediction 16 37 - -
Cma07g00805 633 Gene3D Transferase(Phosphotransferase) domain 1 227 504 - -
Cma07g00805 633 MobiDBLite consensus disorder prediction 115 141 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma03g01097 Cma07g00805 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00805 Cma-Chr7:3686636 Cma18g01256 Cma-Chr18:9793275 6.77E-144 dispersed
Cma12g01073 Cma-Chr12:8486090 Cma07g00805 Cma-Chr7:3686636 9.70E-88 dispersed
Cma17g00258 Cma-Chr17:1332965 Cma07g00805 Cma-Chr7:3686636 3.86E-89 dispersed
Cma03g01097 Cma-Chr3:7515915 Cma07g00805 Cma-Chr7:3686636 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68704 PF00069 Pkinase 6.40E-72 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00805 K04421 - csv:101203907 944.88