Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00813 ATGGCAATTGATCAGGCTGAGCTTAGCACTGAGCAGGTTCTCACAAGGGACATTCCATGGGAGACATACATGACTACTAAACTTATCAATGGAACAAGCCTTCAGCTGTTAAGGCGTTACGATAACAGACCAGAGAGTTACAGGGCACAGTTGTTGGATGAAGATGGTCCAGCTTATGTTCGTGTATTTGTTAGCATTTTACGAGATATATTTAAGGAAGAAACAGTGGAATATGTTTTAGCATTAATCGATGAAATGCTTACAGCAAACCCAAAGAGAGCAAGATTGTTCCATGATGATTCTCTTGCTAATGAAGATACTTATGAACCTTTCCTAAGATTGCTTTGGAAGGGCAATTGGTTCATACAGGAGAAGAGCTGTAATATACTTGCTCTGATAGTGAGTGCTAGAAAAAAAACACATGATGGCAGTTATGCAAATGGTGATGCCTCAAACTCCAAGAGGAAAATTACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCCAGTCGTGCTGTACAGACTTCTATCAATTGCCTTGCAACTTTGCTGAAGGAACCAAAAGTCAAATCCTCCTTTGTCCAAGCAGATGGAGTGAAGCTACTCATCCCTTTGATTTCTCCTGCGTCGACTCAACAATCTATTCAGATTCTATATAAAACATGTTTTTGTGTTTGGCTCTTATCATATTATGAGCCGGCTATTGAATTCTTGGCCACTTCCAGAACCCTTCCAAGACTTATCGATGTCGTCAAGAGTTCCACAAAAGAGAAGGTTGTCCGAGTCGTTATTTTGACCTTAAAGAACTTACTTCACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTCGGACTACCACAAGTTGTTCAAAGTTTGAAATCCCAAGCATGGAGTGATGAGGACCTTTTGGATGCTTTGAATCAACTAGAAGAAGGGCTGAAAGATAACATCAAGAAACTAAGTTCTTTTGACAAGTATAAGCAAGAAGTCCTTCTAGGCCATCTTGACTGGTCTCCTATGCACAAAGATGTAAATTTCTGGCGCGAAAATATCACAAGCTTCGAAGAGAACAACTTCAAGCTATTGAGGGTCCTTATCACCATTCTGGATTCGTCGAGTGATCCAAGGGCTCTAGCAGTTGCTTGTTTTGATCTTTCCCAGTTCATTCAGCACCATCCGGCTGGGAGAGTTATAGTGACAGACTTGAAGGCGAAGGAAAGAGTGATGAAACTGATGAATCATGAGAATGCTGAAGTTACCAAATATTCCCTCCTCTGTATTCAAAGGCTGTTCCTAGGTGCCAAGTATGCCAGCTTTCTGCAGGCTTAA 1365 41.47 MAIDQAELSTEQVLTRDIPWETYMTTKLINGTSLQLLRRYDNRPESYRAQLLDEDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDDSLANEDTYEPFLRLLWKGNWFIQEKSCNILALIVSARKKTHDGSYANGDASNSKRKITTIDDVLDGLVKWLCAQLKNPSHPSRAVQTSINCLATLLKEPKVKSSFVQADGVKLLIPLISPASTQQSIQILYKTCFCVWLLSYYEPAIEFLATSRTLPRLIDVVKSSTKEKVVRVVILTLKNLLHKGTFGAQMVGLGLPQVVQSLKSQAWSDEDLLDALNQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENNFKLLRVLITILDSSSDPRALAVACFDLSQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYSLLCIQRLFLGAKYASFLQA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3746746 3755246 + CmaCh07G008130.1 Cma07g00813 298128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00813 454 CDD VATPase_H 4 448 - -
Cma07g00813 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 454 - -
Cma07g00813 454 PIRSF V-ATP_synth_H 2 453 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cma07g00813 454 Gene3D - 6 333 IPR011989 -
Cma07g00813 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 454 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cma07g00813 454 Pfam V-ATPase subunit H 6 325 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cma07g00813 454 SUPERFAMILY ARM repeat 10 444 IPR016024 -
Cma07g00813 454 Gene3D - 345 446 IPR038497 -
Cma07g00813 454 Pfam V-ATPase subunit H 331 443 IPR011987 GO:0000221|GO:1902600
Cma07g00813 454 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 400 407 IPR018506 GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00813 Cma-Chr7:3746746 Cma14g00502 Cma-Chr14:2448677 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00813 K02144 - csv:101217015 855.129