Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00826 ATGGGGGCTCAAAAGGCGATGAAAGTTCTGAGCGAGAGAGCCGCACTTGTCCGAGAGTCGCTGCAGAAGAGTCAGGTTGTAACGGAGAGCATGGTCTCCATTCTTGGCTCCTTCGATCACCGTCTCTCCGCTCTCGAAACAGCTATGCGACCTACTCAGATCAGAACTCATTCAATTCGGAGGGCGCATGAGAATATCGACAAGACATTGAAGTATGCAGAAAGTATGCTAGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGGCCACATGAGGACTTGGAAATGTACTTGGAAGCAATTAGTCAACTTCGAAGCGCTAATCGCTACTTTACTGGGAACAAAATTTTCCGAAGTAACGAAGCTATTCTTACCCATACAAGCAACTTGCTTGCTAAAGCCATTTCAAAGCTGGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAGCCAGTGGAACCCGATCGTCTTTTCGATTGCCTCCCCAACTCCTTGCGTCCATCTTCAGCATCTTCGCAGCAAGGTGATGGTGGTAGCAAACATAATTCTGACAATCACAACAAAAGCTTAGAGGCTTCCATCTTCATTCCCCCAACTCTTATTCCTCCCAGGGTTCTTCCATTGTTGCATGATTTGGCCCAACAAATGATTATGGCTGGCCATCAGCAGCAAGTCTATAGAATATACAGGGAGACTCGCGCTGCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTTAGCAAGGATGATGTCCAGAAAATGCAGTGGGAGGCCCTTGAAGCTAAGATTGGGAACTGGATACATTACGTGCGCATTGCTGTCAAACTGCTGTTTACTGGGGAAAGGAAAATCTGTGATCAAATATTTGATAGTGCAGACGCTCTCGTGGATCAATGCTTCGCAGATGTGACATCAAACAGTGTGTCAATGCTACTAAGTTTTGGAGACGCAATTGCCAAAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTCTAGACATGTTTGAAATAATGCGAGAACTGCAATCTGAGATTGAAACACTTTTTGGAAGTAAAGCATGCATTGAAATGCGTGATTCTGCATTGAGCTTAACACAACGCCTTGCCGAGACAGCTCAAGAGACTTTTGTTGATTTTGAAGAAGCGGTAGAAAAAGATGCCACAAAAACTGCTGTTCTTGATGGGACTGTTCATCCCTTGACCAGTTATGTGATAAACTACGTGAAGTTTTTATTTGACTACAAATCTACTTTGAAGCAACTATTCCAAGATTTCGAGGCTGTTGATCCAGATGCTCAGTTAGCAGTGATAACTACAAGAATTACGCAGGCACTTCAGACTAATCTTGACGGAAAATCTAAGCAATATAAGGATCCTGCATTAACTCAATTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGTAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATCGAAGGATTGTGCAGCAGCATGCAAATCAATACAAGAGGATTTCTTGGGCCAAGATTTTGCAGTGCCTCACCGTTCAGGCCTCAGGCAGTGGTGGTGCTTCGGCAGATGCAACCTGTGGACTCTCAAAAGCTATGGTGAAAGATAGGTTTAAGACTTTCAATATCCAATTTGAGGAGCTTCATCAACGGCAGTCTCAATGGACAGTTCCTGACAGTGAGTTGCGGGAGTCATTGAGGTTGGCAGTCGCTGAAGTATTATTGCCTGCTTACCGATCCTTCATCAAGCGTTTCGGGCCTATGGTTGACAATGGGAAAACTGGTCTTCAAAGAAGCATCAAATATACACCTGAGGATCTTGAGCGTATGCTAAATGAATTCTTTGAGGGCAAGACATTCAGTGAACAAAAGCGCTAG 1920 43.85 MGAQKAMKVLSERAALVRESLQKSQVVTESMVSILGSFDHRLSALETAMRPTQIRTHSIRRAHENIDKTLKYAESMLAQFDLTRKAEAKILRGPHEDLEMYLEAISQLRSANRYFTGNKIFRSNEAILTHTSNLLAKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSASSQQGDGGSKHNSDNHNKSLEASIFIPPTLIPPRVLPLLHDLAQQMIMAGHQQQVYRIYRETRAAVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHYVRIAVKLLFTGERKICDQIFDSADALVDQCFADVTSNSVSMLLSFGDAIAKSKRSPEKLFVLLDMFEIMRELQSEIETLFGSKACIEMRDSALSLTQRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYKSTLKQLFQDFEAVDPDAQLAVITTRITQALQTNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGSGGASADATCGLSKAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMVDNGKTGLQRSIKYTPEDLERMLNEFFEGKTFSEQKR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3822878 3832035 + CmaCh07G008260.1 Cma07g00826 298141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00826 639 Pfam Exo70 exocyst complex subunit 273 627 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cma07g00826 639 Gene3D Exocyst complex component Exo70 75 639 - -
Cma07g00826 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 636 IPR004140 GO:0000145|GO:0006887
Cma07g00826 639 SUPERFAMILY Cullin repeat-like 76 630 IPR016159 -
Cma07g00826 639 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 636 - -
Cma07g00826 639 MobiDBLite consensus disorder prediction 169 185 - -
Cma07g00826 639 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01443 Cma-Chr4:7345848 Cma07g00826 Cma-Chr7:3822878 0 dispersed
Cma07g00826 Cma-Chr7:3822878 Cma18g00955 Cma-Chr18:8137003 0 dispersed
Cma03g01120 Cma-Chr3:7621957 Cma07g00826 Cma-Chr7:3822878 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00826 K07195 - csv:105436019 1117.83