Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00861 ATGAAAACAAAGCTCGGGAGTCGAAAATCCACAGCTATGGAAGGAGCTTCAATGGATTCGCCGCCAGATTGTTGCCTCACGAAGCCGCCAAGCTCTCAAGGCGTGGTGTCGGTGTTCCCGAGCAGGAAGCACCGAGTCGTGACCACCAGATCGTGGGACTTTCTGGGTCTCAATCACCGCTCCAAACGGAACCCTAAAATCGAATCTAATATCATCGTCGCCGTTTTGGATACTGGGATTTGGATAAATAGCCCTAGTTTCAGCGATGAAGGCTACGGTCCGCCTCCCGCTAAATGGAAGGGCCGATGCGTCACCGGACCTAATTTCACCGCCTGCAACAACAAAGTGATCGGTGCTAATTACTTCGATCTGGACAATGTAAGCCAATTTACAGAGACGAGTGTCGCCGACACGGAGGGGCATGGCTCTCACACGGCGTCGACTGTGGCAGGCTCGGCAGTGGAGGGGGCGAGTTTGTATGGCCTGGGCAAAGGGACTGCACGCGGTGGTGTGCCTTCTGCTCGCATTGCAGTGTACAAAGTGTGCTGGAGTATTTTCTGTAGCGATATGGATGTTCTTGCAGGCTTCGATGAGGCCATTGCTGATGGCGTTGATTTCATTTCCGTCTCCATTGGCTCGGTGGCTGTGGATTTCTTCAGGGACAGCCACGCAATTGGGGCTTTTCATGCTATGAAGAAGGGTATTTTAACGTCCTGCGCCGCTGGCAACGATGGCCCTGAATTGTCCACCGTTGTGAATGTGGCTCCCTGGATTATGACCGTAGCTGCAACTGGCATTGATAGGCGATTTGTCACTGCTTTCAAACTCGGGAATGGCAAGAAATTTACTGGATTCTCCATCAACACTTTCTCGCCCAGGAATCAAATGTACTCTCTTACGAGTGGGGCTAAAGCATCCAACAATGGCACAACCCTAAGAAACGCAAGTGCTAGTGCTTGTGACGCAGATGCTCTCAGCCAAAGCAAGGTGAAAGGAAGAATCGTGTATTGCTTGACAACATTCACAGATTACAACATCGAATCCTTAGGAGGCACTGGAATCATTGAACTCCTTGAAAAACAAACCGATTCTTCCCCCATTTTGCTTCTCCCTGGAGCTGTCATTCCTCCAGTCTCTGGCAAATATATCGATCTCTATATCAACGCCACCAAGGATCCTAGAGCTATCATTTACAAGAGCAAGACCGTCAAAATTGCTGCTCCTTTCGTGGCCTCTTTCTCATCCAGAGGCCCTCAGCTCATCAGCCCAAATATCCTCAAGCCTGATCTTGCTGCACCAGGGATAGATATCTTGGCTGCTTATACCAAGTTGTCAAGTTTGACAGGGAAAATTGCAGACAGTACGTCCATGGCTTGTCCTCACGCCACTGCGGCTGCTGCCTACGTTAAGTCGTTCCACCCCGACTGGTCTCCGGCTGCAGTCAAGTCGGCTCTCATGACCACCGCAACGCCAATGAAGATCAAGTCTGAGGATGCTGAGTTTGGCTCTGGAGCTGGACAAGTAAACCCAGCCAAGGCAGTTCATCCCGGCCTTGTATACGACATTTCGCTCGACTCGTACATATCTTTCCTCTGCAAAGAAGGCTACAACAGTACAACAATTGGCCTACTTGTTGGTAGCAAGGAGTATAACTGCTCCAAGATCAAGCCTGCTCAAGGCACTGACGGGCTCAACTACCCTACGATGCACAAACAGCTCTCAGATCCTGGTTCTGCCATTACAGCGGTGTTTTATCGAACCGTGACTCATGTCGAGTACGGTGCGTCGGTGTACAGGGCAAATATATCATCTCCAGTTGGTCTCTCTGTCAAAGTTTTTCCAGACAGTCTAGATTTTGCGAAGGCAGGAGAAAGGAAGACATTCAAAGTTGTGGTGAAGGGCGAAGCTATGAGAGATGGAACTCGGATTCTATCAGCTTCACTTGAATGGAAGGACTCTAAACACGTAGTTAGAAGCAATATCCTTATCTATAGGCAGTTATTAATGTAA 2010 49.5 MKTKLGSRKSTAMEGASMDSPPDCCLTKPPSSQGVVSVFPSRKHRVVTTRSWDFLGLNHRSKRNPKIESNIIVAVLDTGIWINSPSFSDEGYGPPPAKWKGRCVTGPNFTACNNKVIGANYFDLDNVSQFTETSVADTEGHGSHTASTVAGSAVEGASLYGLGKGTARGGVPSARIAVYKVCWSIFCSDMDVLAGFDEAIADGVDFISVSIGSVAVDFFRDSHAIGAFHAMKKGILTSCAAGNDGPELSTVVNVAPWIMTVAATGIDRRFVTAFKLGNGKKFTGFSINTFSPRNQMYSLTSGAKASNNGTTLRNASASACDADALSQSKVKGRIVYCLTTFTDYNIESLGGTGIIELLEKQTDSSPILLLPGAVIPPVSGKYIDLYINATKDPRAIIYKSKTVKIAAPFVASFSSRGPQLISPNILKPDLAAPGIDILAAYTKLSSLTGKIADSTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSEDAEFGSGAGQVNPAKAVHPGLVYDISLDSYISFLCKEGYNSTTIGLLVGSKEYNCSKIKPAQGTDGLNYPTMHKQLSDPGSAITAVFYRTVTHVEYGASVYRANISSPVGLSVKVFPDSLDFAKAGERKTFKVVVKGEAMRDGTRILSASLEWKDSKHVVRSNILIYRQLLM 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4014311 4018354 + CmaCh07G008610.1 Cma07g00861 298176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00861 669 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 666 IPR045051 -
Cma07g00861 669 PANTHER CUCUMISIN PROTEIN 33 666 - -
Cma07g00861 669 Gene3D - 531 666 - -
Cma07g00861 669 PRINTS Subtilisin serine protease family (S8) signature 137 150 IPR015500 -
Cma07g00861 669 PRINTS Subtilisin serine protease family (S8) signature 453 469 IPR015500 -
Cma07g00861 669 PRINTS Subtilisin serine protease family (S8) signature 68 87 IPR015500 -
Cma07g00861 669 Pfam Fibronectin type-III domain 564 663 IPR041469 -
Cma07g00861 669 Pfam Subtilase family 69 504 IPR000209 GO:0006508|GO:0008236
Cma07g00861 669 CDD Peptidases_S8_3 48 490 IPR034197 -
Cma07g00861 669 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 73 83 IPR023827 -
Cma07g00861 669 Gene3D Peptidase S8/S53 domain 70 527 IPR036852 GO:0004252|GO:0006508
Cma07g00861 669 MobiDBLite consensus disorder prediction 1 24 - -
Cma07g00861 669 ProSiteProfiles Serine proteases, subtilase domain profile. 51 514 - -
Cma07g00861 669 CDD PA_subtilisin_like 274 397 - -
Cma07g00861 669 Gene3D - 267 403 - -
Cma07g00861 669 SUPERFAMILY Subtilisin-like 47 518 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00861 Cma-Chr7:4014311 Cma04g01156 Cma-Chr4:5907534 0 dispersed
Cma06g00462 Cma-Chr6:2168960 Cma07g00861 Cma-Chr7:4014311 3.81E-119 transposed
Cma06g00461 Cma-Chr6:2167919 Cma07g00861 Cma-Chr7:4014311 7.93E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00861 - - csv:101207592 1025.39