Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma07g00864 | ATGGGATCTAATACATGTGAAATTGTTGAAGCAAGGGAAGAAATTAAGGCTGTTCAAAGTAAGGTAGAATCTCGTCATTCGGATTTTGTATCTCACCGAGATCGGAAACTTTCTGCATTGAAAATTGGATTCAAGGGATTTTTAGAGGATGATATCAATCAGCTTTTTGAGTCGATTAGTATTAAAAATGCATCCAAGAGCTTAGGTCATTCACAAGTAGATGTAAATGCGCTGAGAAAAAGTACGCTAAAGAAGCCAATAAGTGTTGGCATGCCTTGCTCGCCAGGTATTGGTACTTCTGATTCTGGTAGTTTGAAGCAGGCACTCAGGGAACTATGCCTTTCAAAGGCGTCTGAGATGGCTGCTATGAAAAGATCATCAAAACCAGCTACCTTGTCAAGACTCTCGGAAGCTGGCCGGATCAAGACATTGTACAATTCAGTTATGGTTGAAGCCACTGAGTCAGGCTCTTCTTCAGATAACAGTAAGGGGGGGCGTGTGGTTGAAATATCCCTGGTTCCAGAGGGCAAAAAAAAGAACGTTGAGCAGAGACTTGAGAATGTCCAAGCATCTGCTGTTAAATCACCAGCTGAAAGTTCTCATTCTTCTCCTCAGTTCACGGTTACGAAAACACAAAGTTCTATGGAGGTTGGTACTCTCGAACAAAACGTCAATACCACTCTGTCAAGGAAAGTTGGACCTCAAACATTAAAGGCAGAGCTGGAGAAGGAAGAGGAGTCCATTACCCCACCATCTGTATCTTCTTGTACGATTAAGAAGGTATTAGAGAAGGAGAAGAAGATTCTTGTCTCGAGCAGGGTAGGAAATAAAGTGTCATCATCCAAGGCTGGACGGAAAGGTCGGCTGCAAACTGCATCTTCATCTAAGTTGGTTAGTGGCAATAAGGTAAGCAAGTTATCTAGAAGTAATTCCCGTTCGATCAAACCAGTTATTCGGAACAAGGGGCTGGTTAAAAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTAAATGGCGATACGGATCCTAGTAAAAAGAAGTTGATATGTGAGAGGTGCCACTGCGCATTGAACAGTGCAGCTAAAGACTCGAAGAAGGGCTCTGCTTCCCAGTTTAGTGCTCTTGGTACTGATGTAAATATGGCTAGTTCAAAATCTGGTGCTAACAAATCAGGCATCACGGATGGCAAGGCTTCTGATGTTCGAGTAAAAAAAAATACAAGGGTACGAGATAAGGGTGAGTTTTCTCAAAGCTCAAAAAGTAGTCAAGGCGAGTACAGTAGCAGTACTACGAGTATTATAAGTGATGACTGCAATGGGCATGGATCGAGTAATGGTAACAGACCTCATATGTCGAAAGATGTAAGGTGGGAAGCCATACGTCACTCACAATTGCAGCATGGGGTTCTCAGCTTGAGGCATTTCAATCTCTTAAAGAAGCTTGGTTGTGGGGACATTGGAACGGTGTATCTTGCCGAGCTAACTGGTACTAATTGCCTATTTGCCATTAAGGTCATGGACAACGAGTTTCTAGCAAGACGGAAGAAAATGCCGAGAGCGCAAACCGAGAGAGAAATACTGAGAATGCTAGATCATCCATTCCTCCCAACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTTGTCATGGAATATTGTCCTGGTGGAGATCTTCATGTTCTGCGGCAGAAGCAGCTAGGCCGAGTTTTTCCCGAGCCTGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCATTGGAGTACTTGCACATGCTTGGAGTTATTTATCGAGATTTAAAACCCGAGAACATTCTTGTCAGAGAAGATGGTCACATAATGCTCACCGACTTCGACCTGTCGCTTAGGTGCACGGTCTGTCCAACACTCCTGAAGTCATCATCCTCCGACTCAGACTTGGCGAAGACATCAGGTCCATGTACAGATTCTAGTTGTGCTGAGCCTTTTTGCCTTGAACCATCATGCCAAGTCCCATGCTTCAGCCCAAGGTTCTTACCAGCTGCTTCCAAAACAAGGAAGTCCAAACCCGACCTCACAACTCAGTTCAGGTCATTGCCCCAGCTCGTTGCTGAACCCACCGATGCACGATCGAATTCCTTCGTTGGCACTCACGAGTATTTGGCACCGGAGATCATCAAAGGAGAGGGTCATGGCGCTGCAGTCGATTGGTGGACGTTTGGTGTTTTTCTCTATGAACTTCTATATGGTAGAACCCCTTTCAAGGGATCCAACAACGAAGAGACATTAGCCAATGTAGTACTGCAGAGCCTCAGTTTTCCCGACAGCCCGATCGTTAGTTTCCAAGCAAGGGATCTTATCCGAGGGCTGTTAGTGAAGGAGCCTGAAAGTCGATTCGGGACGGAAAAAGGAGCGGCCGAAATCAAACAGCACCCGTTCTTCGAGGGGCTAAACTGGGCGTTGATCCGTTGTGCAATTCCTCCAGAAGTCCCGGAGCAAAAAGGAAAGCATCAACCATGGAAAGAGACAGTCGCCATGGCTGGCTCAGATTCCTCTCGTTTGCATTTCTCTCGCCTCCGCTCCGCTCCGATTCGCGGTTTGTCCCTTTCCTCTCTGACGGTCTCAATATCTTGCCGTCCGGAGTCTTCAATCACCCACCGGGCAAGGATATTTCCCAGGAGCAGTATATCTATCGATAGAAGTAAAACGAAAAGGAGAGTCCGATTGAAGTATAAGCTGGACATCATACTGTCTTCAAAAATGCCCAAGATTAAGACAAACCGTGTCAAGTATCCGGAGGGATGGGAGCTAATTGAACCAACTCTCAGAGAATTGCAAGCTAAGATGAGAGAAGCTGAGAATGATCCACATGATGGTAAGAGAAAATGTGAGACATTGTGGCCTATATTCAAAATAGCGCATCAGAAAAGCCGCTATATCTTTGATCTCTATCATCGAAGGAAGGAGATATCCAAAGAATTGTTTGAATTCTGTTTGGACCAAGGCTATGCTGATCGTAACTTAATTGCAAAATGGAAGAAGCCTGGTTATGAACGTTTGTGTTGTCTAAGATGCATACAACCTCGAGATCATAATTTTGCGACGACGTGCGTGTGCCGGGTTCCCAAGCACCTAAGGGAGGAGAAGGTTATCGAGTGTGTGCATTGCGGTTGCAGGGGCTGTGCGAGTGGCGATTGA | 3204 | 45.07 | MGSNTCEIVEAREEIKAVQSKVESRHSDFVSHRDRKLSALKIGFKGFLEDDINQLFESISIKNASKSLGHSQVDVNALRKSTLKKPISVGMPCSPGIGTSDSGSLKQALRELCLSKASEMAAMKRSSKPATLSRLSEAGRIKTLYNSVMVEATESGSSSDNSKGGRVVEISLVPEGKKKNVEQRLENVQASAVKSPAESSHSSPQFTVTKTQSSMEVGTLEQNVNTTLSRKVGPQTLKAELEKEEESITPPSVSSCTIKKVLEKEKKILVSSRVGNKVSSSKAGRKGRLQTASSSKLVSGNKVSKLSRSNSRSIKPVIRNKGLVKKKVKQDLSSPTCSSSTYNAVNGDTDPSKKKLICERCHCALNSAAKDSKKGSASQFSALGTDVNMASSKSGANKSGITDGKASDVRVKKNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDCNGHGSSNGNRPHMSKDVRWEAIRHSQLQHGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVCPTLLKSSSSDSDLAKTSGPCTDSSCAEPFCLEPSCQVPCFSPRFLPAASKTRKSKPDLTTQFRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLSFPDSPIVSFQARDLIRGLLVKEPESRFGTEKGAAEIKQHPFFEGLNWALIRCAIPPEVPEQKGKHQPWKETVAMAGSDSSRLHFSRLRSAPIRGLSLSSLTVSISCRPESSITHRARIFPRSSISIDRSKTKRRVRLKYKLDIILSSKMPKIKTNRVKYPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRKEISKELFEFCLDQGYADRNLIAKWKKPGYERLCCLRCIQPRDHNFATTCVCRVPKHLREEKVIECVHCGCRGCASGD | 1067 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4029515 | 4035801 | + | CmaCh07G008640.1 | Cma07g00864 | 298179 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma07g00864 | 1067 | MobiDBLite | consensus disorder prediction | 405 | 423 | - | - | |
Cma07g00864 | 1067 | MobiDBLite | consensus disorder prediction | 188 | 213 | - | - | |
Cma07g00864 | 1067 | Pfam | Protein kinase domain | 713 | 816 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma07g00864 | 1067 | Pfam | Protein kinase domain | 484 | 634 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma07g00864 | 1067 | ProSiteProfiles | Protein kinase domain profile. | 483 | 816 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma07g00864 | 1067 | ProSitePatterns | G10 protein signature 1. | 1022 | 1044 | IPR018230 | GO:0005634 | |
Cma07g00864 | 1067 | Gene3D | Transferase(Phosphotransferase) domain 1 | 563 | 631 | - | - | |
Cma07g00864 | 1067 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 604 | 616 | IPR008271 | GO:0004672|GO:0006468 | |
Cma07g00864 | 1067 | CDD | STKc_phototropin_like | 481 | 834 | - | - | |
Cma07g00864 | 1067 | Gene3D | Transferase(Phosphotransferase) domain 1 | 709 | 834 | - | - | |
Cma07g00864 | 1067 | MobiDBLite | consensus disorder prediction | 331 | 345 | - | - | |
Cma07g00864 | 1067 | MobiDBLite | consensus disorder prediction | 273 | 345 | - | - | |
Cma07g00864 | 1067 | PANTHER | FLIPPASE KINASE 1-RELATED | 3 | 837 | - | - | |
Cma07g00864 | 1067 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 3 | 837 | - | - | |
Cma07g00864 | 1067 | PRINTS | G10 protein signature | 1019 | 1044 | IPR001748 | GO:0005634 | |
Cma07g00864 | 1067 | PRINTS | G10 protein signature | 1055 | 1064 | IPR001748 | GO:0005634 | |
Cma07g00864 | 1067 | PRINTS | G10 protein signature | 969 | 992 | IPR001748 | GO:0005634 | |
Cma07g00864 | 1067 | PRINTS | G10 protein signature | 934 | 954 | IPR001748 | GO:0005634 | |
Cma07g00864 | 1067 | PRINTS | G10 protein signature | 993 | 1018 | IPR001748 | GO:0005634 | |
Cma07g00864 | 1067 | Pfam | G10 protein | 923 | 1065 | IPR001748 | GO:0005634 | |
Cma07g00864 | 1067 | SMART | serkin_6 | 483 | 816 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma07g00864 | 1067 | MobiDBLite | consensus disorder prediction | 273 | 316 | - | - | |
Cma07g00864 | 1067 | MobiDBLite | consensus disorder prediction | 424 | 439 | - | - | |
Cma07g00864 | 1067 | ProSitePatterns | G10 protein signature 2. | 1055 | 1064 | IPR018230 | GO:0005634 | |
Cma07g00864 | 1067 | SUPERFAMILY | Protein kinase-like (PK-like) | 458 | 836 | IPR011009 | - | |
Cma07g00864 | 1067 | MobiDBLite | consensus disorder prediction | 390 | 439 | - | - | |
Cma07g00864 | 1067 | Gene3D | Phosphorylase Kinase; domain 1 | 481 | 562 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma07g00864 | Cma-Chr7:4029515 | Cma20g00180 | Cma-Chr20:873534 | 0 | dispersed | |
Cma03g01170 | Cma-Chr3:7834652 | Cma07g00864 | Cma-Chr7:4029515 | 2.01E-104 | transposed | |
Cma13g00287 | Cma-Chr13:2544201 | Cma07g00864 | Cma-Chr7:4029515 | 6.27E-91 | transposed | |
Cma02g01339 | Cma-Chr2:7843244 | Cma07g00864 | Cma-Chr7:4029515 | 0 | wgd | |
Cma03g01169 | Cma-Chr3:7831679 | Cma07g00864 | Cma-Chr7:4029515 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68705 | PF00069 | Pkinase | 9.60E-36 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma07g00864 | - | K08286 | csv:101210027 | 1418.29 |