Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00873 ATGCATATTTACAATTTTACCCTCAAACCCGAAGAAGCAGGGAGGGCGAAAAATATAATTTTTCTGGTTGAAGCGCAGAACCAGGTTTTCTCTTATTCCGCTCTCGGAGTCAGAGATAGAAATCGCCTCCGATTGCACTCGTCATCCAAGATGCATTCCAATCACTTGCTTCTCGAGGAGCCTATTCGCATGGCCTCCATCCTCGAGCCATCCAAGGCTAGTTTCTTTCCTGCTATGACGAAGATCGTTGGAACTCTTGGTCCAAGGTCTCGATCTGTTGAGTTGATATCTGGTTGTTTGAAGGCTGGAATGTCGGTTGCTCGTTTCGACTTTTCTTGGGGTGACTCTGAATATCATCAGGAGACTTTGGAAAATTTGAAGGCGGCCGTGAAGATCACTAAGAAGCTTTGCGCTGTAATGCTGGATACCGTGGGCCCTGAGTTGCAAGTACTGAATAAAACTGAGAAGTCTATTTCACTAAAGGAAGATGCCGTAGTTGTCCTAACGCCCAATCAAGAGCTTGAGGCAACTTCGGATCTCTTGCCTATTAACTTTACTGGACTTTCACAGGCTGTAAAGAAAGGAGACACCATTTTTGTGGGTCAATACCTTTTCACTGGAAGTGAATCGACTTCTGTATGGATGGAGGTTTCTGAAGTCAAAGGCGATGATGTCGTTTGTACGGTTAAGAACTCTGCCACACTGTCCGGATCACTGTTCACTTTACATGGCTCTCAAATTCATATTAACCTTCCGACACTTACGGATAAGGATAAGGAGGTTATCTCTAGTTGGGGTGTGCAAAACAAAATTGATTTCCTCTCATTGTCATATACCAGACATGCAGAAGACGTTCGACAAGCTCGTGAATTCCTTTCTAAATTAGGTGACCTTAGCCAAACCCAAATCTTTGCCAAAATTGAAACTGTTGAGGGGTTAACCCATTTTGATGAGATTCTACGCGAAGCAGATGGTATTATTCTTTCCCGTGGGAATTTGGGTATAGATCTCCCACCCGAGAAGGTGTTTTTATTTCAAAAGGCTGCCCTTTACAAGTGTAACATGGCTGGAAAGCCTGCTGTGGTTACTCGTGTCGTGGACAGTATGACCAACAATTTAAGGCCTACTCGTGCAGAAGCTACTGATGTTGCAAATGCTGTCCTTGATGGAAGTGATGCAATTCTTCTGGGTGCTGAGACTTTGCGTGGACAGTATCCCGTAGAGACGATTTCAACTGTTGGTAGGATTTGTGCCGAGTCCGAGAAGGTGTTCAATCAAGATTTGTATTTCAAGAAGACTGTCAAATTTGTTGGTGAACCTATGACGCACTTGGAGTCCATTGCTTCCTCAGCGGTTAGGGCTGCCATTAAGGTGAAGGCTTCAGTTATTATTTGCTTCACTTCATCTGGAAGAGCTGCAAGATTAATTGCTAAATATAGGCCCACGATGCCAGTTATATCTGTAGTCATTCCTAGGCTGAAGACAAATCAGTTGAGGTGGAGCTTTAGTGGTGCATTTGAGGCTAGGCAGTCATTGATAGTAAGAGGCCTCTTCCCCATGCTTGCTGATCCACGACATCCTGCGGAGTCGACTAGCGCAACAAACGAGTCAGTTCTAAAGGTTGCTCTGGATCACGGCAAAGCATATGGAGTAATCAAGCCACATGACCGAGTTGTTGTGTGCCAGAAGGTTGGGGATGCATCTGTGCAGCAGCAGCAGCAGAGGAGCTGTTGTGATATTTCTAGCTGGAGGAAGTGGTACTTACTGTTTAACGAAATGCCTTCGAATCACTTGCTTCTTGAGGAACCTATTAGGATGGCTTCCATTTTGGAGCCTTCCAAGGATAGCGTCTTGCCGACAATGACGAAGATTGTTGGTACTTTGGGCCCTAAGTCCCGATCTGTCGAAGTTATTTCTGCCTGTCTAAGGGCTGGAATGTCTGTTGCTCGGTTCGACTTTTCATGGGGCAGTCCTGATTACCACCAAGAAACTTTGGACAATTTGAAGGCGGCTGTTAAGAACACCAACAAACTTTGCGCTGTTATGCTGGATACAGTGGGTCCTGAGATCCTGGTTGTAAACAGAAGTGAGAAATCTATCTCTCTTAAGGAAGATGAGTTGGTTGTTTTGACACCCAATCAAGAAATAGAGGCGTCTTCGGAGCTGCTGCCTATAAGTTATGATGGACTTTCAAAGGTCGTTAAGAAAGGAGACACCCTTTTTCTTGGTCAGTACCTCTTCACTGGAAGTGAAACAACTTCTGTCTGGCTGGAGGTCTCCGAAGTGAAAGGAGATGATGTTCTTTGCTTGGTAAAGAACTCTGCCACGTTGGTTGGAACAATGTACACTTTGCATGCAGCTGAAATTCGCATTGATCTTCCAACACTTACTGACAAAGATAAGGAGATTATAGCGACGTGGGGAGTAAAAAACAAGATTGACTTCCTCTCTCTCTCACATGCTAGACAAGCGGAGGATGTTCGCCAAGCTCGACAATTTCTTTCTAAGCTAGGCAACCTTAGCCAAACTCATATCTTTGCGAAGATTGAAAGCGTTGAGGGATTAACCCATTTTGATGAGATACTACAAGAAGCAGATGGTATTATTCTTGCTCGTGGCAATTTGGGGTTAGATCTTCCTCCTGAGAAGGTATTCTTGTTTCAGAAAACTGCCCTTCATAGGTGTAATATGGCTGGAAAGCCCGCTGTTTTGACTCGTGTGGTAGACAGCATGACTAGCAACTTGAGACCTACACGTGCAGAAGCTACTGATGTTGCCAATGCTGTACTTGATGGAAGTGATGCAATTCTTCTTGGGGCTGAGACATTGCGTGGATTATATCCAGTAGAAACCATTTCAACTGTTCGTAGAATATGCGCTGAGTCAGAGAAGGTTTTCAATCAAGACTTTTATTTCAAGAAGGCAGTCAAGCATACCGGGGAGCCAATGTCACACTTAGAATCTATTGCCTCCTCTGCTGTTAGGGCAGCCATTAAAGTGAAGGCTTCCGTGATTATATGCTTTACTTCAACTGGAAGGGCTGCTAGATTAATTGCGAAGTATAGGCCAACGATGCCCGTTATATCTGTTGTCATTCCAAGGCTGCAAACAAATCAATTAAAGTGGAGTCTGAGTGGGGCATTTGAGGCTCGACAATCATTAATAAGCAGAGGTCTTTTCCCTGTGCTCGCCGATCCTCAACACCTAGCGGACTCTAACAATGCAACAAATGAGTCAGTTCTGAAGGCTGCTCTAGATCATGGAAAGTTAGCAGGAATCATTAAGGCACATGACCGCGTAGTGGTTTGCCAGAAAGTTGGTGATGCATCAGTTGTAAAGATTATCGAGCTTGAAGATTGA 3360 44.55 MHIYNFTLKPEEAGRAKNIIFLVEAQNQVFSYSALGVRDRNRLRLHSSSKMHSNHLLLEEPIRMASILEPSKASFFPAMTKIVGTLGPRSRSVELISGCLKAGMSVARFDFSWGDSEYHQETLENLKAAVKITKKLCAVMLDTVGPELQVLNKTEKSISLKEDAVVVLTPNQELEATSDLLPINFTGLSQAVKKGDTIFVGQYLFTGSESTSVWMEVSEVKGDDVVCTVKNSATLSGSLFTLHGSQIHINLPTLTDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQIFAKIETVEGLTHFDEILREADGIILSRGNLGIDLPPEKVFLFQKAALYKCNMAGKPAVVTRVVDSMTNNLRPTRAEATDVANAVLDGSDAILLGAETLRGQYPVETISTVGRICAESEKVFNQDLYFKKTVKFVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVISVVIPRLKTNQLRWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESVLKVALDHGKAYGVIKPHDRVVVCQKVGDASVQQQQQRSCCDISSWRKWYLLFNEMPSNHLLLEEPIRMASILEPSKDSVLPTMTKIVGTLGPKSRSVEVISACLRAGMSVARFDFSWGSPDYHQETLDNLKAAVKNTNKLCAVMLDTVGPEILVVNRSEKSISLKEDELVVLTPNQEIEASSELLPISYDGLSKVVKKGDTLFLGQYLFTGSETTSVWLEVSEVKGDDVLCLVKNSATLVGTMYTLHAAEIRIDLPTLTDKDKEIIATWGVKNKIDFLSLSHARQAEDVRQARQFLSKLGNLSQTHIFAKIESVEGLTHFDEILQEADGIILARGNLGLDLPPEKVFLFQKTALHRCNMAGKPAVLTRVVDSMTSNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVRRICAESEKVFNQDFYFKKAVKHTGEPMSHLESIASSAVRAAIKVKASVIICFTSTGRAARLIAKYRPTMPVISVVIPRLQTNQLKWSLSGAFEARQSLISRGLFPVLADPQHLADSNNATNESVLKAALDHGKLAGIIKAHDRVVVCQKVGDASVVKIIELED 1119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4092455 4109083 + CmaCh07G008730.1 Cma07g00873 298188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00873 1119 SUPERFAMILY PK C-terminal domain-like 408 563 IPR036918 -
Cma07g00873 1119 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 598 967 IPR015813 GO:0003824
Cma07g00873 1119 PANTHER PYRUVATE KINASE 595 1119 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 PANTHER PYRUVATE KINASE 52 566 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 Gene3D - 421 563 IPR036918 -
Cma07g00873 1119 PANTHER PYRUVATE KINASE 595 1119 - -
Cma07g00873 1119 PANTHER PYRUVATE KINASE 52 566 - -
Cma07g00873 1119 Pfam Pyruvate kinase, barrel domain 80 425 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 Pfam Pyruvate kinase, barrel domain 622 967 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 56 425 IPR015813 GO:0003824
Cma07g00873 1119 SUPERFAMILY PK beta-barrel domain-like 688 778 IPR011037 -
Cma07g00873 1119 SUPERFAMILY PK C-terminal domain-like 950 1111 IPR036918 -
Cma07g00873 1119 SUPERFAMILY PK beta-barrel domain-like 146 237 IPR011037 -
Cma07g00873 1119 Gene3D - 146 252 IPR015806 GO:0004743|GO:0006096
Cma07g00873 1119 Pfam Pyruvate kinase, alpha/beta domain 445 565 IPR015795 -
Cma07g00873 1119 Pfam Pyruvate kinase, alpha/beta domain 987 1114 IPR015795 -
Cma07g00873 1119 Gene3D - 955 1117 IPR036918 -
Cma07g00873 1119 Gene3D - 80 420 IPR040442 -
Cma07g00873 1119 Gene3D - 622 954 IPR040442 -
Cma07g00873 1119 Gene3D - 689 793 IPR015806 GO:0004743|GO:0006096
Cma07g00873 1119 PRINTS Pyruvate kinase family signature 135 151 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 PRINTS Pyruvate kinase family signature 330 354 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 PRINTS Pyruvate kinase family signature 271 285 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 PRINTS Pyruvate kinase family signature 379 397 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 PRINTS Pyruvate kinase family signature 398 414 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 PRINTS Pyruvate kinase family signature 303 329 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 TIGRFAM pyruv_kin: pyruvate kinase 80 572 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cma07g00873 1119 TIGRFAM pyruv_kin: pyruvate kinase 621 1108 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01161 Cma-Chr2:6842627 Cma07g00873 Cma-Chr7:4092455 5.74E-124 dispersed
Cma07g00873 Cma-Chr7:4092455 Cma18g00821 Cma-Chr18:7167926 5.50E-126 dispersed
Cma03g01181 Cma-Chr3:7887425 Cma07g00873 Cma-Chr7:4092455 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00873 K00873 - csv:101207102 975.696