Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00881 ATGCAGCTCCCTGCCGCCGGCTTCTTGGTTACCTTCAGCCTTCTAGCTCTGGTTTTTCCGGTGGCTATCAGTGACCCTCTTGTCCCTGCACTCTGCATTTTCGGGGACTCGGTAGTGGACGTCGGAAATAACAACAATCTTCTAACAGTTGTTAAGGCCAACTTTCCTCCTTATGGAAGAGACTTTGTGACTCATGCACCAACAGGAAGGTTTTGCAATGGAAAGCTTGCCACTGACTTTACAGCGGAACTCCTTGGATTTTCTTCATACCCTCCTGCTTATCTGGGCCAAGATGCCACTGGAAACAAGCTTTTAACAGGAGCCAACTTTGCTTCCGCTGCTTCTGGCTTTTATGATGGCACTGCTCAGCTCTATCATTCAATTTCTCTAACCCAGCAGTTGAATTATTACAAGGAATATCAAAGCAAAGTTGTAAACATGGTGGGAACAGGGAAAGGCAATGCCATATTCTCTGGTGGTATTCATCTTCTTAGTGCAGGCAGCAGCGACTTCATTCAGAATTACTACGTTAATCCTCTTCTCTACAGAACATACTCACCTCAGCAATTCTCAGACATTCTCATTACTTCTTACTCAAACTTCATTCAGAACTTATATGGACTGGGAGCAAGAAGGATAGGGGTGACAGGTTTACCTCCAATGGGTTGCTTGCCAGCAGCCATCACTCTATTTGGTTCTGGTAGCAACCAATGCATCCAAAGGTTGAACCAAGATGCCATGGCATTCAACACTAAGCTGCAAAGCACATCTCAGAGTTTGCAGAACAGATTCTCTGATCTCAAGCTTGTTGTCTTTGATATTTATCAACCTCTCTTGAATATGGTGTCAAAGCCTGCAGATAATGGGTTTTTTGAGGCAAGAAGGGCTTGCTGTGGAACAGGTACAGTAGAGACCTCCCTCCTCTGCAACAATGGATCAATTGGAACATGTTCGAATGTCACTGGCTATGTTTTCTGGGACGGTTTTCATCCGACCGAAGCCGCGAATAAAGTCTTGGCTGCAGACTTAATTTCTCAGGGTTTCTCCCTCATCTGA 1056 45.17 MQLPAAGFLVTFSLLALVFPVAISDPLVPALCIFGDSVVDVGNNNNLLTVVKANFPPYGRDFVTHAPTGRFCNGKLATDFTAELLGFSSYPPAYLGQDATGNKLLTGANFASAASGFYDGTAQLYHSISLTQQLNYYKEYQSKVVNMVGTGKGNAIFSGGIHLLSAGSSDFIQNYYVNPLLYRTYSPQQFSDILITSYSNFIQNLYGLGARRIGVTGLPPMGCLPAAITLFGSGSNQCIQRLNQDAMAFNTKLQSTSQSLQNRFSDLKLVVFDIYQPLLNMVSKPADNGFFEARRACCGTGTVETSLLCNNGSIGTCSNVTGYVFWDGFHPTEAANKVLAADLISQGFSLI 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4160049 4162511 - CmaCh07G008810.1 Cma07g00881 298196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00881 351 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Cma07g00881 351 PANTHER GDSL-MOTIF LIPASE 8 350 - -
Cma07g00881 351 SUPERFAMILY SGNH hydrolase 182 343 - -
Cma07g00881 351 Gene3D SGNH hydrolase 24 347 IPR036514 -
Cma07g00881 351 Pfam GDSL-like Lipase/Acylhydrolase 33 341 IPR001087 GO:0016788
Cma07g00881 351 PANTHER GDSL ESTERASE/LIPASE EXL3 8 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00881 Cma-Chr7:4160049 Cma08g00747 Cma-Chr8:4493578 1.92E-129 dispersed
Cma02g01364 Cma-Chr2:7962511 Cma07g00881 Cma-Chr7:4160049 1.01E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00881 - - cmax:111471301 696.812