Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00898 ATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGTCCGCTAGGCGTACGAAATTTCTCATCAATGGCGACGATATGGTTTACGATGCGTTGAAGAAACCTGAGGTGGAGAGGCCTTCTCTACCTGTTGATGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGACCGGTACTTTGCGAATGTATCTGTGAGGGATGAACATTTCAAGACCAAGCGCCACAGGAAGCGGGTAAAACTTATGATGGGTCCTGCACCCCACACGCAACTGGACGCCGATTTAGCTGCTGGGATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGA 360 51.11 MGGKCPHRSVKKRRYSHKSARRTKFLINGDDMVYDALKKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMMGPAPHTQLDADLAAGMGMPDNGPKLMAM 119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4240917 4242642 - CmaCh07G008980.1 Cma07g00898 298213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00898 119 SUPERFAMILY beta-beta-alpha zinc fingers 47 110 IPR036236 -
Cma07g00898 119 Gene3D Classic Zinc Finger 45 109 - -
Cma07g00898 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Cma07g00898 119 MobiDBLite consensus disorder prediction 1 20 - -
Cma07g00898 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Cma07g00898 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Cma07g00898 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00898 K14821 - csv:101222807 239.195