Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma07g00914 ATGGTTCCGTGGAGAGCTTCTGCATTACAAATGGCCCCCGCTCCCTTCCAACAACTTGCCCCCCAAAATGGTTCCGTGGAGAGCTTCTGCATCAGCACTAATGATCCACTCAACTGGGGTGTGGCTGCCGAGGCTCTCAAGGGGAGCCATCTCGACGAGGTGAAGCGCATGGTGGAGGAGTACCGGAGGCCCCTTGTCAAGCTCGGTGGTGAAACTCTCACCATTTCCCAAGTGGCTGCCATTGCCACTCGTGATAACCATGTGGTGGTCGAACTGGCCGAGTCTGCTAGAGCGGGCGTTAAAGCTAGCAGTGATTGGGTTATGGAGAGCATGAACAAAGGCACTGATAGCTATGGTGTCACTACTGGCTTTGGTGCTACCTCTCATAGAAGGACCAATCAAGGTGGCGCTCTTCAGAAGGAGCTGATTCGATTCTTGAATGCTGGGATCTTTGGAAGTGGAGCTGAGTCCACCCATACTCTGCCCCACTCCGCTACCAGGGCGGCCATGTTGGTGAGAATCAACACTCTTCTTCAAGGCTATTCGGGCATTCGATTTGAGATTTTGGAAGCCATAACCAAACTCTTGAATTCTAACATCACTCCCTGCTTGCCTCTTCGTGGAACCATCACTGCTTCGGGTGATCTTGTTCCTCTTTCTTATATTGCTGGATTGCTCACCGGCCGACCCAACTCTAAGGCGGTTGGACCAAATGGAGAGAGCCTTAATGCTCAGGAGGCTTTTCGACAAGCTGATATTCCTTCTGGGTTCTTCGAGCTGCAGCCTAAAGAAGGTCTTGCTCTTGTCAATGGCACTGCTCTCGAAGAACCCAGAAGGAATATCAGCTTGTCGAAAAGCCTCCTGAGCATTAAGGCTCTCTCCATTTGGTCCAACCGCCTTAGAGTTGGGTCGGCCGGTGAGCAATCCAGCAATATAAGAAAGAGGAACAAGATCACCCGAAGCAGTGATGGTTCCACGAAGAGGCAAGCAGGGAGTGATGTTAGAATTCAAGAGTTTGGTTATGGCTTCCAAAATCTCAAATCGAATGCCCGAATAGCCTTGAAGAAGAGTGTTGATTCTCACCAACATGGCCGCCCTGGTAGCGGAGTGGGGCAGAGTATGGGTGGACTCAGCTCCACTTCCAAAGATCCCAGCATTCAAGAATCGAATCAGCTCCTTCTGAAGAGCGCCACCTTGATTGGTCCTTCTATGAGAGGTAGCACCAAAGCCAGTAGTGACACCATAGCTATCAGTGCCTTTGTTCATGCTCTCCATAACCCAATCACTGCTAGCTTTAACGCCCGCTCTAGCAGACTCGGCCAGTTGGACCATCACATGGTTATCACGAGTGGCAATGGCAGCCACTTGGGAAATGGTGAGAGTTTCACCACCGAGCTTGACAAGGGGCCTCCGGTACTCCTCCACCATGCGCTTCACCTCGTCGAGATGGCTCCCCTTGAGAGACTCGGCAGCCACACCCCAGTTGAGTGGATCATTTCGGGTGTGGCACAAGCTATCTTCAATCTTCTGAATGGCTGCCATTGTGGAAAAGAATAA 1557 51.45 MVPWRASALQMAPAPFQQLAPQNGSVESFCISTNDPLNWGVAAEALKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDNHVVVELAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGGALQKELIRFLNAGIFGSGAESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAQEAFRQADIPSGFFELQPKEGLALVNGTALEEPRRNISLSKSLLSIKALSIWSNRLRVGSAGEQSSNIRKRNKITRSSDGSTKRQAGSDVRIQEFGYGFQNLKSNARIALKKSVDSHQHGRPGSGVGQSMGGLSSTSKDPSIQESNQLLLKSATLIGPSMRGSTKASSDTIAISAFVHALHNPITASFNARSSRLGQLDHHMVITSGNGSHLGNGESFTTELDKGPPVLLHHALHLVEMAPLERLGSHTPVEWIISGVAQAIFNLLNGCHCGKE 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4339646 4342083 - CmaCh07G009140.1 Cma07g00914 298229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma07g00914 518 Pfam Aromatic amino acid lyase 73 274 IPR001106 -
Cma07g00914 518 PANTHER HISTIDINE AMMONIA-LYASE 23 276 IPR001106 -
Cma07g00914 518 Gene3D - 27 272 IPR024083 -
Cma07g00914 518 MobiDBLite consensus disorder prediction 306 331 - -
Cma07g00914 518 PANTHER PHENYLALANINE AMMONIA-LYASE 23 276 - -
Cma07g00914 518 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 208 224 IPR022313 GO:0016841
Cma07g00914 518 SUPERFAMILY L-aspartase-like 35 274 IPR008948 GO:0003824
Cma07g00914 518 MobiDBLite consensus disorder prediction 372 386 - -
Cma07g00914 518 MobiDBLite consensus disorder prediction 357 386 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00914 Cma-Chr7:4339646 Cma07g00917 Cma-Chr7:4358132 0 dispersed
Cma11g01621 Cma-Chr11:10671747 Cma07g00914 Cma-Chr7:4339646 2.40E-10 dispersed
Cma07g00913 Cma-Chr7:4331588 Cma07g00914 Cma-Chr7:4339646 0 tandem
Cma07g00914 Cma-Chr7:4339646 Cma07g00915 Cma-Chr7:4339661 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma07g00914 K10775 - csv:101218617 468.774